Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0459 ATGAAAATTATGAGAGCAATCAAATCAAACACAGAAAGAATGGAGAACAATAACAAGGTGCTAATGCTAATGGTGTTTTGTTTCTTCTTTTGCTCCATGCCCAATTTATCTACACAGAAAACTTTTACTACTATTGCTCCAAATCAGTTTATGCAATTTGGTGATACTCTTGTTTCTGCAGCTGGGATGTATGAAGCAGGTTTTTTCAACTTTGGAGATCCACAACATCAATACTTCGGTATATGGTACAAGAACATATCGCCAAGGACTATTGTGTGGGTTGCCAATAGAAATACCCCGACACAAAACTCAACAGCAATGTTGAAACTTAACGATCAAGGAAGTCTTGATATTGTGGATGGCTCCAAAGGCATTATCTGGTCCTCCAATATATCAAGAATTGTAGTGAAATCAGTTGTTCAGCTTTTTGATTCGGGAAATCTTGTCCTGAGAGATGCAAACAACTCTCAGAACTTTCTGTGGGAAAGTTTTGACTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTTACTGGTCCATATAGATATCTCACTTCTTGGAGAAACCCTCAAGATCCTGCTGAAGGTGAGTATTCATATAGGATCGATATGGATGGTTTTCCTCAACTGGTTACAGTAAAGGGAGCAAGAATTCTGTATAGAGGAGGACCATGGAATGGATTTCTTTTCAGTGGTTCTCCCTGGCAAAGTTTGTCTAGAGTCTTGAATTTCTCAGTAGTTTTCAGTGACAAAGAAGTCTCTTATCAATATGAAACTTTGAACAGTTCAATTAATACTAGACTGGTGCTAGATTCAAACGGAATTTCACAACGTCTTCAATGGTCAGATAGGACACAAACTTGGGAGGCTATATCTTCTCGTCCTGTAGACCAGTGTGATCCTTATGACACTTGTGGTATCAATTCTAATTGCAATGTTGATATCTTTCCAATATGTAAATGCTTGGAAGGTTTCATGCCAAAATTTCAACCAGAGTGGCAGTTGTCAAATTGGGCTAGTGGGTGTGTAAGGAAAACACCTTTAAATTGTCTCGACGATGGGGATGGATTTTTACCGTACACAAACATGAAGTTGCCAGACACGTCAACATCTTGGTATGACAAGAGCTTGAGCCTCGAGGAATGTAAGACAATGTGTTTGAAAAATTGTTCTTGCACTGCATATGCAAATTCAGATGTCAGAGATGGTGGGAGTGGCTGCTTACTTTGGTTTAACAACATTGTGGACATGAGAAAACATCCTGACGTAGGACAAGACATTTACATACGATTGGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTCGAAGCTTGCTGGGACTGTCGCAGGAATTATAGGACTAATTGTTCTTATATTGGTCACATCAGTATATAGAAAGAAGCTTGGGTATATTAAAAAGTTATTTCACAAGAAGGAAGATAGTGACTTGTCAACAATATTTGATTTTTCGACCATCACCAATGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGTATAATGGTAGATGGCCAAGAGATTGCTGTTAAGAGGCTAGCTAAAACATCGATACAAGGATCCGAGGAGTTCAAAAATGAAGTAAAGATGATGGCAACACTTCAACACCGTAATCTAGTAAAACTTCTCGGCTGTTCTATTCGACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAATAGAAGCTTGGATTACTTTATTTTTGATACTATGCGAAGCAAATTACTAAATTGGAATAAGCGCCTGGAAATTATTAATGGAATTGCTCGAGGGCTGCTATATCTTCATCAAGATTCTACACAAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACGAAGCCGAGGCTAATACAAATAGAGTGATGGGATCATATGGATACATGCCTCCAGAATATGCAGCGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGAAAGAATCATGGATTTCGTGACCCTCTACATCGTCTTAACCTTCTTGGTCATGCATGGAAACTATGGATTGAAGAAAGACCACTGGAGTTAATAGCAGACATATTATATGATGATGAGGCCATATGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGCGTACAGCAGCTACCAGAAGATAGGCCTAATATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCGAAACCAAATGAACCCGGGTTCTACGCTGCAAGGGATAATACAAATAGCATGGAATGTTCATCTAAAGAGTGTTCAATAAACGAAGCTTCAATCTCATTGTTAGAGGCCCGATAG 2472 0.3827 MKIMRAIKSNTERMENNNKVLMLMVFCFFFCSMPNLSTQKTFTTIAPNQFMQFGDTLVSAAGMYEAGFFNFGDPQHQYFGIWYKNISPRTIVWVANRNTPTQNSTAMLKLNDQGSLDIVDGSKGIIWSSNISRIVVKSVVQLFDSGNLVLRDANNSQNFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRNPQDPAEGEYSYRIDMDGFPQLVTVKGARILYRGGPWNGFLFSGSPWQSLSRVLNFSVVFSDKEVSYQYETLNSSINTRLVLDSNGISQRLQWSDRTQTWEAISSRPVDQCDPYDTCGINSNCNVDIFPICKCLEGFMPKFQPEWQLSNWASGCVRKTPLNCLDDGDGFLPYTNMKLPDTSTSWYDKSLSLEECKTMCLKNCSCTAYANSDVRDGGSGCLLWFNNIVDMRKHPDVGQDIYIRLASSELDHKKNKRNSKLAGTVAGIIGLIVLILVTSVYRKKLGYIKKLFHKKEDSDLSTIFDFSTITNATNHFSNRNKLGEGGFGPVYKGIMVDGQEIAVKRLAKTSIQGSEEFKNEVKMMATLQHRNLVKLLGCSIRQDEKLLIYEFMPNRSLDYFIFDTMRSKLLNWNKRLEIINGIARGLLYLHQDSTQRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDEAEANTNRVMGSYGYMPPEYAAHGSFSIKSDVFSFGVVVLEIISGRKNHGFRDPLHRLNLLGHAWKLWIEERPLELIADILYDDEAICSEIIRFIHVGLLCVQQLPEDRPNMSSVVFMLKGEKLLPKPNEPGFYAARDNTNSMECSSKECSINEASISLLEAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0459 823 Pfam Protein tyrosine and serine/threonine kinase 510 776 IPR001245 GO:0004672|GO:0006468
Mtr3g0459 823 CDD B_lectin 54 167 IPR001480 -
Mtr3g0459 823 SMART serkin_6 507 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0459 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mtr3g0459 823 Pfam D-mannose binding lectin 90 193 IPR001480 -
Mtr3g0459 823 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 823 - -
Mtr3g0459 823 SMART blect_4 48 167 IPR001480 -
Mtr3g0459 823 SMART ntp_6 357 436 IPR003609 -
Mtr3g0459 823 ProSiteProfiles Bulb-type lectin domain profile. 42 163 IPR001480 -
Mtr3g0459 823 PIRSF SRK 14 823 IPR024171 GO:0004674
Mtr3g0459 823 Gene3D Transferase(Phosphotransferase) domain 1 583 787 - -
Mtr3g0459 823 ProSiteProfiles PAN/Apple domain profile. 355 437 IPR003609 -
Mtr3g0459 823 CDD STKc_IRAK 513 781 - -
Mtr3g0459 823 Gene3D - 37 164 IPR036426 -
Mtr3g0459 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 198 IPR036426 -
Mtr3g0459 823 Gene3D Phosphorylase Kinase; domain 1 481 582 - -
Mtr3g0459 823 SUPERFAMILY Protein kinase-like (PK-like) 490 787 IPR011009 -
Mtr3g0459 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 823 - -
Mtr3g0459 823 CDD PAN_AP_plant 351 437 - -
Mtr3g0459 823 Pfam PAN-like domain 355 422 IPR003609 -
Mtr3g0459 823 Pfam S-locus glycoprotein domain 225 334 IPR000858 GO:0048544
Mtr3g0459 823 Gene3D Hepatocyte Growth Factor 354 433 - -
Mtr3g0459 823 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0459 Mtr-Chr3 5852737 5856634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0459 452 794 Receptor kinase-like Gene Family AT4G23190 51.136 7.87e-114 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0459 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0459 - - mtr:MTR_3g019580 1602.03