Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0458 ATGGAGAACAATAACCAGGGGCTTATGCTAATGGTGTTTTTTTTCTTCTTTTGCTCCATGCCCAATTTCTCTACGCAGAAAACCTTTACTACTATAGCTCCAAATCAATTTATGCAATACGGTGATACTCTTGTTTCTGCAGCTGGAATGTATGAAGCAGGATTTTTCAACTTTGGTGATTCACAACGCCAATACTTCGGTATATGGTACAAGAACATATCGCCAAGGACTATTGTGTGGGTTGCCAATAGAAATACCCCGACACAAAACTCAACAGCAATGTTGAAACTTAACGATCAAGGAAGTCTTGTTATCGTGGATGGCTCCAAAGGCATTATCTGGTCCTCCAATATATCAAGAATTGTAGTGAAATCAGTTGTTCAGCTTTTTGATTCGGGAAATCTTGTCCTGAAAGATGCAAACTCTCAGAACTTTCTGTGGGAAAGTTTTGACTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTTACTGGTCCATATAGATATCTCACATCTTGGAAAGACCCTCAAGATCCTGCTGAGGGTGAGTGTTCATATAAGATAGATACACATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAAAGGTTCTGTATAGAGGAGGGTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGACTGCGTAGAGTCTTGAATTTCTCAGTAGTAGTCACCGACAAAGAATTCTCTTATCAATATGAAACTTTAAACAGTTCAATTAATACTAGATTGGTGCTAGATCCATATGGAACTTCACAACGTTTTCAATGGTCAGATAGGACACAGATTTGGGAGGCTATATATGCTCTTCCTGCAGACCAGTGTGATGCTTATGACTTGTGTGGTAACAATTCTAACTGCAATGGTGATATCTTTCCAATATGTGAATGCTTAGAAGGTTTCGTGCCAAAATCTCAACCAGAGTGGGAGTCATCAAATTGGTCTGGTGGGTGCATAAGGAAAACACGTTTAAATTGTCTCCATGGCGATGGATTTTTACCGTACACAAACATGAAGTTGCCAGACACGTCAACATCTTGGTATGACAGGAGCTTGAGCCTTGAGGAATGTAAGACAATGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTCAGATATCAGAGATGGTGGGAGTGGCTGCTTACTTTGGTTTGACAACATTGTCGACATGAGAAAACATCCAGACCAAGGACAAGACATTTACATACGGCTGGCATCTTCAGAGCTTGATCATAAAAAGAATAAGCGGAAATTGAAGCTTGCTGGGACTCTTGCAGGAGTTGTTGCATTCATTATAGGACTAACCGTTCTCGTATTGATCACATCAGTATATAGAAAGAAGCTTGGGTATATAAAAAAGTTATTTCTCTGGAAGCACAAGAAGGAGAAGGAATATTGTGATTTGGCAACAATATTTGATTTTTCAACCATCACTATTGCAACAAATAATTTCTCTGTCAAAAGCAAGTTGGGAGAAGGTGGTTTTGGAGCAGTGTACAAGGGTGTAATGGTAGACGGCCAAGAGATTGCTGTTAAAAGGCTTTCTAAAACATCGGCACAAGGAACCGAGGAGTTCAAAAATGAAGTAAACTTGATGGCAACACTTCAACACCGTAATCTTGTTAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTATGAATTCATGGCCAACAGAAGCTTGGATTACTTTATTTTTGATACTATGCGAAGCAAATTGCTAAATTGGAATAAGCGCCTGGAAATTATTGATGGAATTGCTCGAGGGCTGTTGTATCTTCATCAAGATTCTACACTAAGAATCATACATAGAGATATGAAAACAAGCAATATTCTTCTTGATATTGATATGATTCCAAAGATAGCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACGAAGCAGAGGCTAATACAAATAGATTGATCGGATCATATGGATATATGCCTCCAGAATATGCAGCGGATGGATCCTTCTCAATAAAATCTGATGTTTATAGTTTTGGAGTTGTTCTACTTGAGATAATTAGCGGTAGAAAGAATCATGGATTTCGCGACCCACTACACCGTCTTAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGACCACTGGAGTTAATAGCTGACGTATTATATGATGATGACGCCATATGTACAGAAATACTAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGTGAAAAGTTACTTCCGAAACCAAGTGAACCCGGGTTCTACGCAGCAAGCGATAATAAAAATAGCATAGAATCTTCATCTAAAGAGTGTTCAATAATTGAAGCTTCAATCTCATTATTAGAGGCCCGATAG 2454 0.3867 MENNNQGLMLMVFFFFFCSMPNFSTQKTFTTIAPNQFMQYGDTLVSAAGMYEAGFFNFGDSQRQYFGIWYKNISPRTIVWVANRNTPTQNSTAMLKLNDQGSLVIVDGSKGIIWSSNISRIVVKSVVQLFDSGNLVLKDANSQNFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWKDPQDPAEGECSYKIDTHGFPQLVTAKGAKVLYRGGSWNGFLFTGVSWQRLRRVLNFSVVVTDKEFSYQYETLNSSINTRLVLDPYGTSQRFQWSDRTQIWEAIYALPADQCDAYDLCGNNSNCNGDIFPICECLEGFVPKSQPEWESSNWSGGCIRKTRLNCLHGDGFLPYTNMKLPDTSTSWYDRSLSLEECKTMCLKNCSCTAYANSDIRDGGSGCLLWFDNIVDMRKHPDQGQDIYIRLASSELDHKKNKRKLKLAGTLAGVVAFIIGLTVLVLITSVYRKKLGYIKKLFLWKHKKEKEYCDLATIFDFSTITIATNNFSVKSKLGEGGFGAVYKGVMVDGQEIAVKRLSKTSAQGTEEFKNEVNLMATLQHRNLVKLLGCSIQQDEKLLIYEFMANRSLDYFIFDTMRSKLLNWNKRLEIIDGIARGLLYLHQDSTLRIIHRDMKTSNILLDIDMIPKIADFGLARSFMGDEAEANTNRLIGSYGYMPPEYAADGSFSIKSDVYSFGVVLLEIISGRKNHGFRDPLHRLNLLGHAWRLWIEERPLELIADVLYDDDAICTEILRFIHVGLLCVQQKPENRPNMSSVVFMLKGEKLLPKPSEPGFYAASDNKNSIESSSKECSIIEASISLLEAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0458 817 Pfam D-mannose binding lectin 77 179 IPR001480 -
Mtr3g0458 817 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672|GO:0006468
Mtr3g0458 817 CDD STKc_IRAK 507 775 - -
Mtr3g0458 817 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Mtr3g0458 817 ProSiteProfiles Protein kinase domain profile. 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0458 817 Pfam PAN-like domain 341 407 IPR003609 -
Mtr3g0458 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 184 IPR036426 -
Mtr3g0458 817 SMART blect_4 35 153 IPR001480 -
Mtr3g0458 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 815 - -
Mtr3g0458 817 Gene3D Hepatocyte Growth Factor 338 423 - -
Mtr3g0458 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mtr3g0458 817 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Mtr3g0458 817 SMART serkin_6 501 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0458 817 CDD B_lectin 41 153 IPR001480 -
Mtr3g0458 817 SUPERFAMILY Protein kinase-like (PK-like) 488 787 IPR011009 -
Mtr3g0458 817 CDD PAN_AP_plant 337 422 - -
Mtr3g0458 817 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Mtr3g0458 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 815 - -
Mtr3g0458 817 Gene3D - 24 150 IPR036426 -
Mtr3g0458 817 SMART ntp_6 342 421 IPR003609 -
Mtr3g0458 817 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Mtr3g0458 817 Gene3D Phosphorylase Kinase; domain 1 474 576 - -
Mtr3g0458 817 PIRSF SRK 3 817 IPR024171 GO:0004674
Mtr3g0458 817 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0458 Mtr-Chr3 5829777 5833806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0458 439 791 Receptor kinase-like Gene Family AT4G23190 50.413 6.82e-115 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0458 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0458 - - gmx:100819820 1123.61