Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0456 ATGGAGAAGCATAATAAGCTGATAATGCTAATGGTGTGTACTTTCTTATTTTGCTTCATGCCCACTTTCTCTAAACTGAACACTCTTACACCAAATCTGTTTATCCAATATAATGAAACCCTTGTTTCTGCTGCTGGAACCTTTGAAGCAGGTTTTTTCAATTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAGGACAATTGTGTGGGTTGCCAATAGAAATACTCCTGTACAAAACTCAACAGCAATGCTGAAACTCAATGATCAGGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGTGTCATCTGGAACACCAATTCATCAAGAATTGTAGCGGTGAAATCAGTTGTTGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGCAGACAGCACTCAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAACTTAGTTACGGGTCCATATAGATATCTCACTTCTTGGAGAAACCCTGATGATCCTGCTGAAGGTGAGTGTTCATATAAGATAGATACACATGGTTTTCCCCAACTGCTTACTGCAAAGGGGGCAATAATTCTGTATAGAGCAGGGTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAATGCATAGAGTCTTGAATTTCTCAGTAATGTTCACTGACAAAGAAATCTCTTACGAATATGAAACCTTGAACAGTTCAATTATTACTAGAGTGGTACTAGACCCAAATGGATTATCACAACGTTTACAATGGACAGATAGGACACAGAATTGGGAAGCTTTAGCGAATCGTCCTGCAGACCAGTGTGATGCTTATGCCTTTTGTGGTATCAATTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGTTTGGAAGGTTTCATGCCAAAATTTCAACCAAAGTGGGAGTCATCAGATTGGTCTGGTGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTGCCAGATACGTCAGCATCGTGGTTTGACAAAACCTTAAGCCTTGAGGAATGTAAGACAATGTGTTTGAAAAACTGTACTTGCAATGCATATGCAACTTTAGATATCAGAGATGATGGGAGTGGCTGCATACTTTGGTTTCACAACATTGTGGACATGAGAAAACATCAAGACCAAGGACAAGACATTTACATACGGATGGCATCTTCAGAACTTGATCATAAAAAGAATAAGCAGAAGTTGAAGCTTGCTGGGACTCTTGCAGGAGTTATTGCATTCACTATAGGACTAATAGTTCTTGTATTGGTCACATCAGCATATAAAAAGAAGATTGGGTATATAAAGAAGTTATTTCTCTGGAAGCACAAGAAGGAGAAGGAAGATGGTGAATTGGCTACAATATTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTGTCAGAAACAAGTTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGCCGTACTGGTAGACGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCGGGACAAGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTGCTTTATTTTTGATACTACACGAAGCAAATTACTAGATTGGACTAAGCGTTTGGAAATTATTGACGGTATTGCTCGGGGGCTGTTGTATCTCCATCAGGATTCTACATTAAGAATCATTCATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTCATATGATCCCAAAGATATCCGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACTTATGGATATATGCCTCCAGAATATGCGGTGCATGGGTCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTTGTGACCCTCTGCATCATCGAAACCTTCTTGGTCATGCATGGAGACTGTGGATTGAAGGCAGGCCAGAGGAGTTAATAGCTGACATGTTATACGATGAGGCAATATGCTCCGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAAGGGCGAAAAGTTACTCCCAAAACCAAGTGAACCCGGGTTCTACGGAGGAAGTGATAATAATATTAATAATAATACAATCAGCACAGGATCTTCATCTAAAGGGTGTTCAGTAAATGAAGCTTCAATCTCATTGTTAGAGGCAAGAGGATGGTCACAAGCCAAAAATGGGCAAGTGAAAGGTTTTAGAGGAAGCTTGAGAATGCAGAACCATAATATGGTGCTAATGCTAATAGTGTGTACTTTCTTATTTTCCTCCATGCCCGCTTTATCTAAACTGAAAACTCTTACTCCAAATCAGTATATCCAATATAATGAAACCCTTGTTTCTGCTATTGGAACCTTTGAAGCAGGATTTTTCAATTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTATAACAGCATTTTACCTAGGACTGTTGTGTGGGTTGCCAATAGAAACACCCCTGTACAAAACTCAACAGCAATGCTGAAACTCACTGATCAGGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGTGACATCTGGAACTCCAATTCATCAAGAACTGTGGCGGTGAAAACAGTTGTTGTGCAGTTGTTGGATTCAGGAAACCTTGTTGTGAAAGATGTAAACAGCACTCAGAACTTTTTGTGGGAAAGTTTTGACTATCCTGGTGACACTTTCCTTCCTGGAATGAAGCTGAAAAGTAACTTAGTTACTGGTCCATATAGATATCTCACATCATGGAGAAGCCCTCAAGATCCTGCTGAAGGTGAGTGTTCGTATAAGATAGATACACATGGTTTTCCTCAACTGGTTACTGCAAACGGGGCAATATTTCTGTATAGAGCAGGGTCATGGAATGGATTTCTTTTCACTGGTGTTTCTTGGCAAAGAGTGCATAGAGTCATGAATTTCTCTGTAATATTCACTGACAAAGAAATCTCTTACCAATATGAAACTTTGAGCAGTTCAATTATTACTAGAGTCGTGCTAGACCCAAATGGAATATCACAACGCTTACAATGGACAGATAAGACACAGGATTGGGCGGCTTTAGCCAAACGTCCTGCAGACCAGTGTGATGCTTATACCTTTTGTGGTATCAATTCTAACTGCAATATGAATGACTTTCCAATATGTGTATGTTTGGAAGGTTTCAGGCCAAAATTTCAACTGAAGTGGGAGGCATCAGATTGGTCTGGTGGGTGCGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTACCAGATACATCATCATCATGGTATAACAAGATCTTGAGCCTTGAGGAATGTAAGACAATGTGTTTGAAAAACTGTTCTTGTTCTGCATATGCAACTTTAGATATCAGATATGGTAGTGGCTGCTTACTCTGGTTTGACGACATTGTTGACATGAGAATACATCAAGACCAAGGACAAGACATTTACATACGGCTGGCATCTTCAGAACTTGATCATAAAAAGAATAAGCAGAAATTGAAGCTTGCTGGGACTCTTGCAGGAGTTGTTGCATTCATTATAGGACTAAACGTTCTTGTATTGGTCACATCAGTGTATAGAAAGAAGCTTGGGCATATAAAAAAGTTATTTCTCTGGAAGCACAAGAAGGAGAAGGAAGATGGTGAATTGGCTACAATCTTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTGTCAGAAACAAGTTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCGTAATGGTAGACGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGATGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTTCTTTATTTTTGATACTACGCGAAGCAAATTACTAGATTGGACTAAGCGTTTGGAAATTATTGATGGTATTGCTCGGGGGCTGCTGTATCTCCATCAGGATTCTACATTAAGAATCATTCATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCCGATTTCGGTTTAGTCAGATCATTCATTGGAGAGCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCGGTGCATGGGTCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGCGGATTTCGTGACCCTCTTCATCGTCTAAACCTTCTTGGTCATGCATGGAAATTGTGGATTGAAGGCAGGCCAGAGGAGTTAATGGCTGACATATTATATGATGAGGCAATGTGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTGCAACAGCTACCGGAAAATAGGCCTAACATGTCATCGGTGGTTTTTATGTTAAAGGGCGAAAAGTTACTTCCGAAACCAAGTGAACCCGGGTTCTACGGAGGAAGAGATAATGATATTAATAATAATACAATCAGCACAGGATCTTCATCTAAAGGGTGTTCAGTAAATGAAGCTTCAATCTCATTGTTAGAGGCAAGATAG 4980 0.3892 MEKHNKLIMLMVCTFLFCFMPTFSKLNTLTPNLFIQYNETLVSAAGTFEAGFFNFGDPQRQYFGIWYKNISPRTIVWVANRNTPVQNSTAMLKLNDQGSLVILDGSKGVIWNTNSSRIVAVKSVVVQLLDSGNLVVKDADSTQNFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRNPDDPAEGECSYKIDTHGFPQLLTAKGAIILYRAGSWNGFLFTGVSWQRMHRVLNFSVMFTDKEISYEYETLNSSIITRVVLDPNGLSQRLQWTDRTQNWEALANRPADQCDAYAFCGINSNCNINDFPICECLEGFMPKFQPKWESSDWSGGCVRKTHLNCLHGDGFLPYTNMKLPDTSASWFDKTLSLEECKTMCLKNCTCNAYATLDIRDDGSGCILWFHNIVDMRKHQDQGQDIYIRMASSELDHKKNKQKLKLAGTLAGVIAFTIGLIVLVLVTSAYKKKIGYIKKLFLWKHKKEKEDGELATIFDFSTITNATNNFSVRNKLGEGGFGPVYKAVLVDGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDCFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIHMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFCDPLHHRNLLGHAWRLWIEGRPEELIADMLYDEAICSEIIRFIHVGLLCVQQKPENRPNMSSVVFMLKGEKLLPKPSEPGFYGGSDNNINNNTISTGSSSKGCSVNEASISLLEARGWSQAKNGQVKGFRGSLRMQNHNMVLMLIVCTFLFSSMPALSKLKTLTPNQYIQYNETLVSAIGTFEAGFFNFGDPQRQYFGIWYNSILPRTVVWVANRNTPVQNSTAMLKLTDQGSLVILDGSKGDIWNSNSSRTVAVKTVVVQLLDSGNLVVKDVNSTQNFLWESFDYPGDTFLPGMKLKSNLVTGPYRYLTSWRSPQDPAEGECSYKIDTHGFPQLVTANGAIFLYRAGSWNGFLFTGVSWQRVHRVMNFSVIFTDKEISYQYETLSSSIITRVVLDPNGISQRLQWTDKTQDWAALAKRPADQCDAYTFCGINSNCNMNDFPICVCLEGFRPKFQLKWEASDWSGGCVRKTHLNCLHGDGFLPYTNMKLPDTSSSWYNKILSLEECKTMCLKNCSCSAYATLDIRYGSGCLLWFDDIVDMRIHQDQGQDIYIRLASSELDHKKNKQKLKLAGTLAGVVAFIIGLNVLVLVTSVYRKKLGHIKKLFLWKHKKEKEDGELATIFDFSTITNATNNFSVRNKLGEGGFGPVYKGVMVDGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDFFIFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDIDMIPKISDFGLVRSFIGEQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFRDPLHRLNLLGHAWKLWIEGRPEELMADILYDEAMCSEIIRFIHVGLLCVQQLPENRPNMSSVVFMLKGEKLLPKPSEPGFYGGRDNDINNNTISTGSSSKGCSVNEASISLLEAR* 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0456 1659 CDD PAN_AP_plant 1176 1260 - -
Mtr3g0456 1659 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Mtr3g0456 1659 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Mtr3g0456 1659 Pfam S-locus glycoprotein domain 1050 1159 IPR000858 GO:0048544
Mtr3g0456 1659 CDD B_lectin 877 992 IPR001480 -
Mtr3g0456 1659 CDD STKc_IRAK 1345 1612 - -
Mtr3g0456 1659 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Mtr3g0456 1659 Gene3D Transferase(Phosphotransferase) domain 1 1415 1616 - -
Mtr3g0456 1659 ProSiteProfiles Protein kinase domain profile. 1339 1616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0456 1659 Pfam PAN-like domain 341 407 IPR003609 -
Mtr3g0456 1659 Pfam PAN-like domain 1180 1245 IPR003609 -
Mtr3g0456 1659 Gene3D Hepatocyte Growth Factor 1177 1262 - -
Mtr3g0456 1659 Gene3D Hepatocyte Growth Factor 338 422 - -
Mtr3g0456 1659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mtr3g0456 1659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1460 1472 IPR008271 GO:0004672|GO:0006468
Mtr3g0456 1659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 803 - -
Mtr3g0456 1659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 856 1637 - -
Mtr3g0456 1659 SUPERFAMILY alpha-D-mannose-specific plant lectins 914 1023 IPR036426 -
Mtr3g0456 1659 SMART ntp_6 342 421 IPR003609 -
Mtr3g0456 1659 SMART ntp_6 1181 1259 IPR003609 -
Mtr3g0456 1659 Gene3D Phosphorylase Kinase; domain 1 1312 1414 - -
Mtr3g0456 1659 Gene3D Phosphorylase Kinase; domain 1 474 576 - -
Mtr3g0456 1659 SMART serkin_6 501 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0456 1659 SMART serkin_6 1339 1583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0456 1659 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 856 1637 - -
Mtr3g0456 1659 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 18 803 - -
Mtr3g0456 1659 Gene3D - 23 150 IPR036426 -
Mtr3g0456 1659 Gene3D - 862 989 IPR036426 -
Mtr3g0456 1659 SUPERFAMILY Protein kinase-like (PK-like) 1324 1610 IPR011009 -
Mtr3g0456 1659 Pfam D-mannose binding lectin 913 1018 IPR001480 -
Mtr3g0456 1659 Pfam D-mannose binding lectin 74 179 IPR001480 -
Mtr3g0456 1659 ProSiteProfiles PAN/Apple domain profile. 1180 1260 IPR003609 -
Mtr3g0456 1659 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Mtr3g0456 1659 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Mtr3g0456 1659 CDD PAN_AP_plant 337 422 - -
Mtr3g0456 1659 SMART blect_4 32 153 IPR001480 -
Mtr3g0456 1659 SMART blect_4 871 992 IPR001480 -
Mtr3g0456 1659 CDD STKc_IRAK 507 774 - -
Mtr3g0456 1659 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Mtr3g0456 1659 Pfam Protein tyrosine and serine/threonine kinase 1341 1606 IPR001245 GO:0004672|GO:0006468
Mtr3g0456 1659 Pfam Protein tyrosine and serine/threonine kinase 503 769 IPR001245 GO:0004672|GO:0006468
Mtr3g0456 1659 CDD B_lectin 38 153 IPR001480 -
Mtr3g0456 1659 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0456 1659 ProSiteProfiles Bulb-type lectin domain profile. 865 988 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0456 Mtr-Chr3 5773351 5787182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0456 452 786 Receptor kinase-like Gene Family AT4G23230 53.216 3.67e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0456 PK_Tyr_Ser-Thr 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0456 - - var:108337036 2015.35