Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0443 ATGACAGGGGTGATTAAGATTGCTTGTCTCTCTGGTTCTCTACGAAAAGGCTCTTTTCACACTGGCCTCATTCGTCATGCTATTCATCTGAACATATTTGGTGATGTTGATGTTGATGATATGGAATTCGTGTACGTTGATATTTCGAATTTGCCATTGTTGAACACTGATCTTGAGGAAGAAGGGACTTTTCCTCTTGAAGTTGAAGATTTTCGTGATTATATTCTTGGAGCTGATAGCTTTCTATTTGCTTCTCCTGAGTATAACTATTCCATCTCAGCTCCACTAAAGAATGCACTTGATTGGGGATCAAGACCACCAAATGTATGGGCTGGTAAAACTGCTGCCATAGTGAGTGTTGGAGGAGCCTTTGGTGGAGGAAAAGCTCAACATCATCTCCGCCAAATCGGGGTTTTCCTTGATATTCATTTCATCAATAAACCTGAGTTCCATCTAGATGTATTTAAGCATCCAGATAAATTTGACGATGATGGTGACTTGGTTGATGAAGAGATCAAGAATAGATTCAAGGAAGTTCTTGTGTCCTTAAAGGAATTTACCCTTCAGCTTCAAGGCTCAAGGTTGCTGGCTCCCGTCGAACCTGAAACACAAATTGAACCATCACCTATCGAAGTTCCAACATTATTATCCTTAGACGAGTTGAAGGAAAAAACTGACAATTTTGGACCAAACACATGGATTGGTGAAGGGCGGTATGGGAGCGTGTATTACGCAACATTAAACGATGGAAAGGCGGTGGCTTTGAAAAAGCTTGATGTTTCTACTGAACCCGAATCAAATGACGAGTTTCTAACCCAGGTTTTCATGGTCTCAACATTGAAGAATGAAAATCTTGTTGAGTTACATGGATACTGTGTCGAAGAAAATCTTCGTGTACTTGCATATGAGTATGCTATTATGGGCTCTCTTCATGACATTTTGCACGGTAAAAATGGAGTTCAAGGGGCGCAACCATGGCCAACTCTTAATTGGATGCAGCGAGCAAGAATTGCAGTCGATACAGCAAGGGGATTGGAATATTTACATGAGAAAGTTCAACCATCAATCATACACAAGGATATCAGGTCAAGTAATGTGCTTATCTTTGAAGATTACAAAGCTAAGGTAGCTGATTTTAACCTCTCTAATACAAAGGGGCCCTTTAGAAATGCCATGGAGCAGTTGACTGAAAAAAGTGATGTTTACGATTTTGCCGTCATTCTTCTTGAGCTCCTTACAGGTAGGAAACCCGTTGATCATACATTGCCTCGAGGAGAACAAAATCTTGTCACATGGGCTACCACAAGATTAAGTGAAGATAAAGTGCAAGAATGTGTGGACCCAAAACTCGAAGGAGAATATCCCGCAGTAGCAGCTGCTAAGGTTGCAGCTATAGCAGCACTGTGTTTGCAAGATGAAGCTGATTTTAGGCCCAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGCGGCCTCCCGCTCCTGAACCAGAAACTTGA 1503 0.4145 MTGVIKIACLSGSLRKGSFHTGLIRHAIHLNIFGDVDVDDMEFVYVDISNLPLLNTDLEEEGTFPLEVEDFRDYILGADSFLFASPEYNYSISAPLKNALDWGSRPPNVWAGKTAAIVSVGGAFGGGKAQHHLRQIGVFLDIHFINKPEFHLDVFKHPDKFDDDGDLVDEEIKNRFKEVLVSLKEFTLQLQGSRLLAPVEPETQIEPSPIEVPTLLSLDELKEKTDNFGPNTWIGEGRYGSVYYATLNDGKAVALKKLDVSTEPESNDEFLTQVFMVSTLKNENLVELHGYCVEENLRVLAYEYAIMGSLHDILHGKNGVQGAQPWPTLNWMQRARIAVDTARGLEYLHEKVQPSIIHKDIRSSNVLIFEDYKAKVADFNLSNTKGPFRNAMEQLTEKSDVYDFAVILLELLTGRKPVDHTLPRGEQNLVTWATTRLSEDKVQECVDPKLEGEYPAVAAAKVAAIAALCLQDEADFRPNMSIVVKALQPLLRPPAPEPET* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0443 500 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 188 497 - -
Mtr3g0443 500 Pfam NADPH-dependent FMN reductase 5 152 IPR005025 GO:0016491
Mtr3g0443 500 Gene3D Transferase(Phosphotransferase) domain 1 307 493 - -
Mtr3g0443 500 Gene3D Phosphorylase Kinase; domain 1 201 304 - -
Mtr3g0443 500 ProSitePatterns Tyrosine protein kinases specific active-site signature. 356 368 IPR008266 GO:0004672|GO:0006468
Mtr3g0443 500 SUPERFAMILY Protein kinase-like (PK-like) 206 487 IPR011009 -
Mtr3g0443 500 Gene3D - 3 192 IPR029039 -
Mtr3g0443 500 SUPERFAMILY Flavoproteins 6 180 IPR029039 -
Mtr3g0443 500 ProSiteProfiles Protein kinase domain profile. 228 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0443 500 Pfam Protein tyrosine and serine/threonine kinase 234 384 IPR001245 GO:0004672|GO:0006468
Mtr3g0443 500 Pfam Protein tyrosine and serine/threonine kinase 393 487 IPR001245 GO:0004672|GO:0006468
Mtr3g0443 500 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Mtr3g0443 500 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 188 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0443 Mtr-Chr3 5665665 5669397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0443 215 492 Receptor kinase-like Gene Family AT3G58690 41.611 2.97e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mtr3g0443 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0443 K13436 - gmx:548003 461.455