Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0441 ATGGAGCAACAACGTATGATATTTCCTTCTACCAAGAAAATGTGTACTTATGATGTTTTCCTCAGTTTTAGAGGAGAAGATACTCGATATGGTTTCACAGGACATCTCTACAATGCTTTACACCAAAGAGGAATCAACACTTTCATGGATGATGAAGAGATTAAGAGAGGAGAACAAATTTCACCCACACTTTTCAAAGCAATTCAAGAGTCTAGAATAGCTATAATTGTGTTCTCAAAAACCTATGCATCCTCAAAATGGTGTCTTCAAGAACTTGTCAAAATCGTTGAATGTTTCAAAGCCAAGGAACTAGTGATATTTCCAGTGTTTTACAACGTGGATCCTTCGGAGGTTCGAAATCAGAAGACAAGTTATGGAGAACAATTGGCTAAGTATGAGGAGAAAATGAAGGAGGAAGTGCAAAGTTGGAGGTTAGCTTTACATGAAACTGCCAGCCTTGCAGGGTGGCATTTTAGAGATGGATATGAATATGAGTATGAATTTATCAAAAGGATCGGTGACACGGTGTGCAGCACATCAGTACCCAACCTTTCACATGTTGAGGATTATGCAGTTGGACTTGAGCCACGTGTATCTAAAATACTATATCGTATGCAAATGTCTGATCCCAATGTCGTTATGATAGGAATATGTGGGGTTGCTGGAATAGGCAAAACTACGTTGGCAAGAGCTGTGTATGATTCCATTGGCCAACAATTTGAAGGTTTATGCTTTCTGTGTAATGTAAGAGAATATTCAACCAAATATGGATTGGCATATCTACAACAGGTAATTCTTTCTGATATGGTTGGCGAGAATATCAATCTGCGTAATGAGATTGATGGAATTTCAATCCTAATCAGAAAGTTGCAAAGTAAAAGGATTCTTTTGATACTTGATGATGTTGACAAGTTGGATCAATTGAAGAATTTAGCAGGAGCACCAAGTTGGTTTGGTTGCGGAAGTAGGATTATCATAACTACTAGGCATAAAGATATTCTAGCAGCTCATGGTGTTGGAAATATATATGATGTACCTATATTTGATTATCATGAAGCTCTTCACTTTTTAAGTGCCGTTGCATCAAAAATACCTAATCCTGAAGGAGTCTGGGATCGGGCAATCAGCTACGCCCGTGGCCTTCCGTTGGTTTTAAAGGTTATAGCTTCTGATTTATTTGAAAAATCAACAGATGAATGGGAGATTTCATTGGACAGGTATGAAAAAGTCCGCAATGAAGGAACTCAGAGTATATTTGAAGTGAGTTATAATAGCTTGAATGAATGTGAGAAGAGAATTTTCATTGACATCGCGTGTTTCTTCAATAGAGAGACATTTTCATATGTCAAGGAAATACTATCTGCTTGTGGTTTCTATACCAAATATGGTTTTGACAGACTTAAGGACAGGTCCCTCATATCAATCACTCCCAGTGGAAGGTTGTTGGTGCATGATCATATAATAGGCATGGCTATGAATATAGTACACCAAGAATCACCCATGAATCCTTGCAAACGAAGTAGGTTATGGTTACCGGAGGATGTTCTTCAAGTTTTAGACGAAAATGCGAATATGAGGAGTTTGGTTAGTATTGATTTCACTGACTGTATGTTTTTAAGAGAAGTACCGGATATGTCTGCTGCCCCAAACTTGATGACATTGTATCTTGATAATTGCATAAATATTACTAAAATTCATGATTCTGTTGGATTTCTTGATAACCTTGAAGAGCTGACAGCCACAGGATGCACTAGTCTAGAAACAATCCCTGTTGCATTCGAGTTGTCATCTCTTAGAGTTCTCTCGTTCTCTGAGTGCTCGAAACTAACGAGGTTCCCAGAAATATTGTGCAAGATCGAAAATTTGCAACACATCAACTTGTGTCAAACTGCCATAGAGGAATTACCATTTTCAATTGGAAATGTGACAGGACTTGAAGTTTTAACTCTGATGGATTGTACTAGGCTTGATAAGCTACCTAGTAGCATATTTACACTACCAAGACTTCAAGAAATTCAAGCTGACTCATGTAAAGGGTTTGGCATTTCTACTGAATTTGAAGAGGATAATGGACCACTGAATTTCACTGTTTGTCCAAACAAGATTCATCTTCATTTGAGCTCTTGCAATTTAACGGATGAGCATCTTTTTATATGTCTCAGTGGTTTCGCCAATGTGGTACATCTGGACATCTCTTACAGTAATTTTACCGTCCTTCCGCCATGCATTAAACAATGTATCAACTTGAAGGCTCTTGTGCTCACAAACTGTATGCAGCTTCAAGAAATCTCAGCAATTCCACAAAATTTGAGAGAAATAGATGCATCGAACTGCACCTCATTGACATCCCAGTCACAAAGTGTACTATTAAGCCAGGCATATCATGAAACTGGAGAAAAAACTGTAATGCTTCCAGGATCAAGTATACCAGAATGGTTTGATCATTCTAGCAGTGAAAGATCCATATCATTTTACGCTCGTAAGAGATTCCCTAGAATTTGTGTGTGTGTTGTTTTTGGAATGTCAGAAAATCTGCCTCATCATTTTCTAGTTAGGTTATGTTTAACCATCAACGGCCACAAAACGATACTATCTCCATGTTCCAGTTGGTCAATTCTGAAGGAACATGTTTGGCAGTTTGATCTAAGATCCATTATCAATAATCACAATCTGACACAAACATGGTTGGAACATGGTTGGAATCATGTGGAAGTTTCATGTATAGATTGTGAAGATGAGCATTTGATGGCACAAGCTGTTCATGGAATGAGAAGAATGGCAATTGTGAAATGGTATGGAGTTCATGTGTACAGACAAGAAAACAGAATGGAGGATATATCTTATTCACAAGTGCCAAAATTCTACAAGAATGATCATGATGAAAGATTTAATGTAGACAATTACCCTTTGTCTAAACGGCTGTGTAGATGA 2931 0.3777 MEQQRMIFPSTKKMCTYDVFLSFRGEDTRYGFTGHLYNALHQRGINTFMDDEEIKRGEQISPTLFKAIQESRIAIIVFSKTYASSKWCLQELVKIVECFKAKELVIFPVFYNVDPSEVRNQKTSYGEQLAKYEEKMKEEVQSWRLALHETASLAGWHFRDGYEYEYEFIKRIGDTVCSTSVPNLSHVEDYAVGLEPRVSKILYRMQMSDPNVVMIGICGVAGIGKTTLARAVYDSIGQQFEGLCFLCNVREYSTKYGLAYLQQVILSDMVGENINLRNEIDGISILIRKLQSKRILLILDDVDKLDQLKNLAGAPSWFGCGSRIIITTRHKDILAAHGVGNIYDVPIFDYHEALHFLSAVASKIPNPEGVWDRAISYARGLPLVLKVIASDLFEKSTDEWEISLDRYEKVRNEGTQSIFEVSYNSLNECEKRIFIDIACFFNRETFSYVKEILSACGFYTKYGFDRLKDRSLISITPSGRLLVHDHIIGMAMNIVHQESPMNPCKRSRLWLPEDVLQVLDENANMRSLVSIDFTDCMFLREVPDMSAAPNLMTLYLDNCINITKIHDSVGFLDNLEELTATGCTSLETIPVAFELSSLRVLSFSECSKLTRFPEILCKIENLQHINLCQTAIEELPFSIGNVTGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQADSCKGFGISTEFEEDNGPLNFTVCPNKIHLHLSSCNLTDEHLFICLSGFANVVHLDISYSNFTVLPPCIKQCINLKALVLTNCMQLQEISAIPQNLREIDASNCTSLTSQSQSVLLSQAYHETGEKTVMLPGSSIPEWFDHSSSERSISFYARKRFPRICVCVVFGMSENLPHHFLVRLCLTINGHKTILSPCSSWSILKEHVWQFDLRSIINNHNLTQTWLEHGWNHVEVSCIDCEDEHLMAQAVHGMRRMAIVKWYGVHVYRQENRMEDISYSQVPKFYKNDHDERFNVDNYPLSKRLCR* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0441 976 Gene3D - 176 339 IPR027417 -
Mtr3g0441 976 Pfam TIR domain 17 180 IPR000157 GO:0007165
Mtr3g0441 976 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 156 IPR035897 -
Mtr3g0441 976 Gene3D - 10 175 IPR035897 -
Mtr3g0441 976 SMART AAA_5 211 349 IPR003593 -
Mtr3g0441 976 Pfam NB-ARC domain 198 429 IPR002182 GO:0043531
Mtr3g0441 976 Gene3D Ribonuclease Inhibitor 611 793 IPR032675 -
Mtr3g0441 976 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 523 - -
Mtr3g0441 976 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 527 964 - -
Mtr3g0441 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 437 IPR027417 -
Mtr3g0441 976 SMART till_3 16 153 IPR000157 GO:0007165
Mtr3g0441 976 ProSiteProfiles TIR domain profile. 15 176 IPR000157 GO:0007165
Mtr3g0441 976 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 527 964 IPR044974 GO:0006952
Mtr3g0441 976 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 523 IPR044974 GO:0006952
Mtr3g0441 976 Gene3D Ribonuclease Inhibitor 507 610 IPR032675 -
Mtr3g0441 976 Gene3D - 348 427 IPR042197 -
Mtr3g0441 976 PRINTS Disease resistance protein signature 214 229 - -
Mtr3g0441 976 PRINTS Disease resistance protein signature 289 303 - -
Mtr3g0441 976 PRINTS Disease resistance protein signature 378 392 - -
Mtr3g0441 976 PRINTS Disease resistance protein signature 593 609 - -
Mtr3g0441 976 SUPERFAMILY L domain-like 500 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0441 Mtr-Chr3 5645814 5651987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0441 8 761 WRKY Transcription Factor Family AT4G12020 26.103 4.67e-51 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0441 - - gmx:100796191 996.112