Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0438 ATGAGTAACACAGAGAGAACTCAAAGTATGAAAGAATGGTTCATCTCTTCCCAAGCTCTTCTTAGCATGTTATTAGTGCAAATATTTGGAACTGGGATACAACTTTTATCAAGGGTCATCTTGGTTCAGGGCACTTTCATTTTTGCACTCAATGCATATCGACAAATTGTTGCTGCTGTTTGTGTCGCCCCCTTTGCACTTTATTTTGAAAGAGGAGTAGGGCAGAAGTTGAATTGGAGAGTTTGGTTATGGCTTTTCTTTAATGGATTAGTGGGGATGACAATGGCTTTTGGATTATTCTATTATGGTCTCCGAGACACATCTGCTACTTATGCTGTCAACTTTCTCAACTTGGTTCCCATTTGCACCTTCTTGACTTCTATCATATGCAGAATGGAGAATTTGAGTATTAGAACATGGGTTGGTAGAGCTAAGGGTATTGGGGCAATTTTGTGTGTTGGTGGAGCATTAGCTACAAGTCTTTACAAAGGGAAGGAATTTTATATTGGTCCTCATCATCATAGTTCCCATTCTGCAGGGGTTATTTCTGTTGTAGCACATAAAACTCATATGCTTCGTGGAACTTTCTTTTTGGTTGGATCATGTTGCTTTTACACAGCTTGGTTTATTCTGCAAGTGAAGATGGTCAAAGTATTTCCATTGAGGTATTGGGGAACAATGATATCATGCATTATGGCAGCAATTCAGTCAGTAGTAATAGGCTTATCCATAGATTCCAGTAAAGCTGCTTGGAGATTAGGGTGGAATTTACAACTCATTACTATACTCTATTCAGGAGCATTGGCTACTGCTGCAACATTTTGTTTACTATCATGGGCGATCACAATCAAGGGACCTAGTTATCCTCCAATGTTCAATCCACTTTGTCTAGTTTTTGTTGCCATTTCAGAAGCTTTCATACTTGGTGAACCACTCAAAGTTGGAACGTTGCTAGGCATGGTTTTGATCATTGTAGGATTGTACTACTTTTTATGGGGTAAAAGGAATGAGATGCCATGTTCACCACAAACAAATGTAGCAGCTGCAGAATTATCAACAATCATGGTTGATGATCCTACTTTGGCTCAATCAAGAGCTGTTGTAGTACCAAGTTCTTCACCAGATGAAATTGTACATATTGAAATTGATAAAACGGATAAAAACTGA 1167 0.3865 MSNTERTQSMKEWFISSQALLSMLLVQIFGTGIQLLSRVILVQGTFIFALNAYRQIVAAVCVAPFALYFERGVGQKLNWRVWLWLFFNGLVGMTMAFGLFYYGLRDTSATYAVNFLNLVPICTFLTSIICRMENLSIRTWVGRAKGIGAILCVGGALATSLYKGKEFYIGPHHHSSHSAGVISVVAHKTHMLRGTFFLVGSCCFYTAWFILQVKMVKVFPLRYWGTMISCIMAAIQSVVIGLSIDSSKAAWRLGWNLQLITILYSGALATAATFCLLSWAITIKGPSYPPMFNPLCLVFVAISEAFILGEPLKVGTLLGMVLIIVGLYYFLWGKRNEMPCSPQTNVAAAELSTIMVDDPTLAQSRAVVVPSSSPDEIVHIEIDKTDKN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0438 388 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Mtr3g0438 388 Pfam EamA-like transporter family 22 152 IPR000620 GO:0016020|GO:0016021
Mtr3g0438 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Mtr3g0438 388 PANTHER WAT1-RELATED PROTEIN 17 352 - -
Mtr3g0438 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Mtr3g0438 388 PANTHER WAT1-RELATED PROTEIN 17 352 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0438 Mtr-Chr3 5631747 5636525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0438 20 334 Nodulin-like Gene Family AT1G09380 37.107 1.18e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0438 - - gmx:100792281 512.301