Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0434 ATGGCAGCGACGGTTGCTGGTGCATTTATTTCGTCTTTTGTTGAAATGATTCTCGAGAGGTTGGCTTCAGGTGATTTCCGGGACAACTTCAGTAGATACAAACTTGACGTTGGCCTGGCAGACAAACTTGGCATTACACTTAATTCTATAAATCAAGTGCTGGAAGAAGCAGAACAAATGCAGTACAAAAGCACATATGTAAAGAAGTGGCTTGATGATCTTAAACATGCTGTATATGAGGCAGACCAAATTTTCGATGAGATTGCTACTGACGCACAACTGAATAAGCTGAAAGATGAATCTGAACCTGTTACCAACACAACATTTGAATCTAGGATCAAAGAATTGATAGAGATGCTAGAACTTCTTGTGAATCAAAAGCTAATGTTGGGATTGAAAGAAAGTCTTTGTGCTAGTAATGAAGGTGTCATCAGCTGGAAATCCTCAAAAGAACTGCCGACTTCATCTCTGGGGAACAAATCGGACCTATGTGGTAGAGATGTTGAGGAAGAGGAAATCATAAAGTTTTTACTTTCAGATAATGACGGTAGCAACCGGACACCCGTAATCACCATAGTGGGTTCTGGTGGGATGGGTAAGACCACCCTTGCTGAGCTTGTGTATAACGACGATAGAATTAAAGAGCATTTTGAACATAAAGCTTGGGTCTATGTTTCAGAATTTTTTGATGCTGTTCGAATTACCAAAGAAATAATTAGTAGGTTAGGTTATTCTTTAGCAAAAGGAGAGGACTTGAATCTACTCCAACAACAGCTGCATCAAAGAATAACAGGCACGAGATATTTGCTTGTTATAGAGGACGTTCAGAATGGCAGTGGGGAATGTTGGGAACAGTTACTACTTCCCTTTAATCATGGATCTTTTGGAAGTAAGATTATTGTGACCACACGTGACAAAGAGGTAGCAGCAGTAATGAAATCCTCCCAAATAGTTCATTTGAAGCAATTGGAGGAAAGCGATGGTTGGAATTTATTTGTGAGACATGCTTTTCACGGAAAAAATGCAAGTGAATATCCAAATCTTGAATCAATTGGGAAGAAAATTGTAAACAAGTGTGGAGGGCCGCCTTTAGCTCTGAAATCATTAGGGAATCTCTTGCGAATGAAATTTTCTCCTGGTGAATGGACCAAGATATTGGATGCAGATATGTTGCCTTTAACGGATGAGGACAACAACCTTAACATTTACCTGATATTGGGATTGATTTACCATAACTTTCCTTCCAGTGTGAAGCGATGTTTTGCTTATTTTTCCATATTTCCCAAAGCCAATTGCTTATTCAAGGATCAATTAATCAAGCTTTGGATGGCAGATGGGTTGCTGAAATGTTTTAGAGCAGAAAAGAGTGAAAAAGAGTTGGGTGATGAATTTTTTGATTATCTTGAGTCAATTTCGTTTATACAACAATCATTATATCCAGGGCTTGATAACAAGCACCGGTTTTTCATGCATGATCTTGTCATTGATTTAGCAAGATCAGTGTCAGGAGAATTTTCTTTACGAATAGAGGGTGATAGGGTGCAAGATATCCCTGAAAGAGCACGCCATATTTGGTGCTCTCTTGATTGGAAATATGGTTATAGAAAATTAGAGAATATTTGTAAGATTAAGGGATTACGCAGTTTGAAGGTAGAAGAACAAGGCTATGATGAGCAATGCTTCAAGATATGCAAGAATGTGCAAATTGAACTGTTTTCAAGTCTAAAATATTTGCGTATGTTAACATTCTATGGTTGTAATAATCTCTCCGAGCTAGCTGACGAGATAAGCAACTTAAAGCTTCTGTGTTATCTAGACCTTTCTTACACTGGAATTACAAGCCTACCTGATTCCATTTGTGTGTTGTATAATTTGCAGACACTCTTATTGCTAGGATGTAGATTGACTGAGCTCCCTTCAAATTTTTACAAACTTGTCAATTTACGTCATCTTAATCTAGAAAGCACTCTTATCTCAAAGATGCCAGAGCAAATACAAAGGCTAACCCATCTTGAGACGTTGACAAATTTTGTTGTGGGAGAGCATAGTGGGTCTAATATTAAGGAGTTGGAAAAACTCAACCATCTTCGAGGAACACTTTGTATTTCACAGTTGGAAAATGTCACTGATCGTGCAGATGCTGTGGAAGCAAATTTGAAAAATAAGAGACATTTGGAAGTATTGCATATGAGGTATGGTTACAGAAGAACAACTGATGGCTCAATAGTTGAGAGGGATGTCTTGGAGGTTCTCGAACCAAATAGCAACCTCAATAGTCTCATCATCGAGGACTACAGAGGCACTGGCTTTCCACATTGGCTTGGGGACTGTTATTTACTCAATTTAGTATCCCTTGAACTGAATAGATGTGGATTTTGTTTCCAGTTTCCACCACTTGGGCAGCTTCCCTCTCTTAAGGAGCTTTCTATTTCAGAATGTGATGGAATAGAGATTATCGGTGAAGAGTTTTATGGCTATAATTCATCAACTGTTCCATTCGCTTCCCTTGAAAATTTGAAATTTGATAACATGTACGGTTGGAATGAATGGTTATGTACTAAAGGCTTCCCTTCTCTTACATTTCTTTTAATAACAGAATGTCCAAAATTGAAAAGAGCACTGCCTCAACATCTTCCTTGTTTAGAAAGATTGGTGATTTACGATTGTCCAGAGTTGGAGGCTTCAATTCCTGCCAATATAAGACAGCTAGAGCTACACGGATGTGTAAACGTTTTCATAAATGAATTGCCAACCAACTTGAAAAAGGCTTACCTTGGAGGAACTCGTGTCATTGAGTCCTCTCTAGAACAAATTTTGTTCAACAGTTCCTCTCTTGAACAGTTGAATGTTGGTGACTACGATGGTGAAAATCTTGAATGGCCCTCTTTTGATTTGCGAAGTTGTAATTCACTTTGCACTCTGTCTATATCCGGATGGTGTTCCTCATCCTTGCCTTTTGCACTTAACTTGTCCACCAATCTTCATTCTCTAGATTTGTATGATTGCCGACAGCTCAAATCGTTTCCACAAAGAGGTTTACCGTCCCGCCTGAGTAGCCTCCGAATAAACAAATGCCCTGAACTGATTGCATCAAGAAAGGAGTGGGGTTTGTTCGAACTAAATTCTCTGAAAGAGTTCAGAGTTAGTGATGACTTTGAAAGCATGGACTCCTTCCCGGAGGAGAATCTACTGCCCCCAACTCTTAACACTATTCATTTGGAAAATTGTTCAAAGCTAAGAATAATCAACTACAAGGGTCTTCTTCATCTCAAATCTGTCAGACTCCTACGCATTGAATATTGTCCTTGTCTTGAGCGATTGCCAGAGGAGGGTCTTCCGAGCTCCCTTTCTACTTTGTACATTCGTGAATGTCGAATAGTTAAGCAGAGGTACCAAAAGGAGGAAGGAGAGAGTTGGAATACAATTTGTCACATCCCTGATGTATTTATTTATTGA 3456 0.3898 MAATVAGAFISSFVEMILERLASGDFRDNFSRYKLDVGLADKLGITLNSINQVLEEAEQMQYKSTYVKKWLDDLKHAVYEADQIFDEIATDAQLNKLKDESEPVTNTTFESRIKELIEMLELLVNQKLMLGLKESLCASNEGVISWKSSKELPTSSLGNKSDLCGRDVEEEEIIKFLLSDNDGSNRTPVITIVGSGGMGKTTLAELVYNDDRIKEHFEHKAWVYVSEFFDAVRITKEIISRLGYSLAKGEDLNLLQQQLHQRITGTRYLLVIEDVQNGSGECWEQLLLPFNHGSFGSKIIVTTRDKEVAAVMKSSQIVHLKQLEESDGWNLFVRHAFHGKNASEYPNLESIGKKIVNKCGGPPLALKSLGNLLRMKFSPGEWTKILDADMLPLTDEDNNLNIYLILGLIYHNFPSSVKRCFAYFSIFPKANCLFKDQLIKLWMADGLLKCFRAEKSEKELGDEFFDYLESISFIQQSLYPGLDNKHRFFMHDLVIDLARSVSGEFSLRIEGDRVQDIPERARHIWCSLDWKYGYRKLENICKIKGLRSLKVEEQGYDEQCFKICKNVQIELFSSLKYLRMLTFYGCNNLSELADEISNLKLLCYLDLSYTGITSLPDSICVLYNLQTLLLLGCRLTELPSNFYKLVNLRHLNLESTLISKMPEQIQRLTHLETLTNFVVGEHSGSNIKELEKLNHLRGTLCISQLENVTDRADAVEANLKNKRHLEVLHMRYGYRRTTDGSIVERDVLEVLEPNSNLNSLIIEDYRGTGFPHWLGDCYLLNLVSLELNRCGFCFQFPPLGQLPSLKELSISECDGIEIIGEEFYGYNSSTVPFASLENLKFDNMYGWNEWLCTKGFPSLTFLLITECPKLKRALPQHLPCLERLVIYDCPELEASIPANIRQLELHGCVNVFINELPTNLKKAYLGGTRVIESSLEQILFNSSSLEQLNVGDYDGENLEWPSFDLRSCNSLCTLSISGWCSSSLPFALNLSTNLHSLDLYDCRQLKSFPQRGLPSRLSSLRINKCPELIASRKEWGLFELNSLKEFRVSDDFESMDSFPEENLLPPTLNTIHLENCSKLRIINYKGLLHLKSVRLLRIEYCPCLERLPEEGLPSSLSTLYIRECRIVKQRYQKEEGESWNTICHIPDVFIY* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0434 1151 PRINTS Disease resistance protein signature 189 204 - -
Mtr3g0434 1151 PRINTS Disease resistance protein signature 262 276 - -
Mtr3g0434 1151 PRINTS Disease resistance protein signature 359 373 - -
Mtr3g0434 1151 PRINTS Disease resistance protein signature 800 816 - -
Mtr3g0434 1151 Coils Coil 705 725 - -
Mtr3g0434 1151 Gene3D - 322 409 IPR042197 -
Mtr3g0434 1151 Gene3D - 31 124 - -
Mtr3g0434 1151 PANTHER DISEASE RESISTANCE PROTEIN RP 33 881 IPR044974 GO:0006952
Mtr3g0434 1151 PANTHER OS05G0414200 PROTEIN 33 881 - -
Mtr3g0434 1151 Gene3D - 146 319 IPR027417 -
Mtr3g0434 1151 Pfam Rx N-terminal domain 9 98 IPR041118 -
Mtr3g0434 1151 SUPERFAMILY L domain-like 490 895 - -
Mtr3g0434 1151 Pfam NB-ARC domain 171 387 IPR002182 GO:0043531
Mtr3g0434 1151 Gene3D - 410 501 IPR036388 -
Mtr3g0434 1151 Gene3D Ribonuclease Inhibitor 913 1138 IPR032675 -
Mtr3g0434 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 423 IPR027417 -
Mtr3g0434 1151 Gene3D Ribonuclease Inhibitor 535 912 IPR032675 -
Mtr3g0434 1151 SUPERFAMILY L domain-like 899 1127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0434 Mtr-Chr3 5607654 5612599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0434 185 381 WRKY Transcription Factor Family AT5G45050 27.404 7.22e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0434 - - mtr:MTR_7g021000 1176