Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0417 ATGGATGATGAGGTGAAGGTCATTCATCAATGTCAAGTGAGTCCTCCACAAGGTTCTCTTCCATCTTCAATCACAATTCCATTGAGTTACCTTGACCTTCCATGGTTTCGCTGCCCCTATATGAAAAGAATTTACTACTACAACTTCCCTCATTCCACACAACACTTCCTTCAAACTTCACTCCCAATTCTCAAAAACTCTCTTTCCCTCACTCTCCAACATTTCTTCCCTTTCTCCTCTAAGACCGTTTTTCCTCCTAAACCAAAAACCCCTTACATTCTCTACTCTCAAGGTGACTCCATCTCATTTACAATATGTGAATCCAAATCAAACTTCAACCACCTCATATCCAATTCACCAAAAGATCTTGCAATTTCAAACCCTTTTGCTCCTTTAATTCCATCACCAAGTATTTTACAAGATGGCACATTGTTGTTCCCAATATTGGCCATTCAAATCACTCTTTTTCCAAACTCTGGACTCACAATTTGTCTCACTTTTAGACATGAAATTGCGGATGGTAAATCATTTCATCATTTCATTAAATATTGGTCCTTACTTTCAAGTGGAAACTTAGGAAATTCATCTCTTTCATTACCGTTACACAATAGAGACATTATTCAAGACACAAAAAATCTTAAACAAAGTTTCTTAGAACAACTTTGGAATTCTCCACCAAAAACAATAGAATCTACTAGTAGCAACAACAACATGGTTCGTCATAGATTTATATTAACACATCACCAAGTGGAAAAATTGAAGAGATGGATCGTTACAAAAAGTAAAACTATTGGTCTTGAAACACTTCATTTGTCAACCTTTGTTGTTACATGTTCTTTGTTTTGGGTATCTAAGGTAAAAACACAATCACAACATGACACAAACAAAAGTATAGTTGATTGTGTTTTTGACAATGATTTTGATGATAATTATGGTTTTGGATTTTTAATGGATTTGCGAGACCATTTTAAGATTTCAACAAATTATTTTGGAAATTGTTTAGGCTCTTGTATTGTGGCACTTCCAAAGAGGAAGTTATCGGGAGAGAATGGTATATGTGAAGCAGTTAATTCTATTGGAATAGAAATTAAGGGTTTGATTGATCCACTAAAAAGGGTTGAAGATCTTATGTTTTTGCAACGTATTAGGGACTTGGATATTAAGTTTCAAAATATAACTTCTGTTGCAGCATCACCAAAGTTTAATGTGTATGAAACTAATTTTGGATGGGGGAAGCCTGTTTTGAGTGAAATTCTTCATGTGGAGAACTCAAGTACATTTTGTCTTTCAAGTTCTAAAGATGAAGATCGTGGCATTGAAGTTGGGATGGTGTTAGAGGCAGCTCAGGTGAAGAAATTTAGTGATGTCCTAGAAGCTCAACTTAGAGATATTGTGGGACTTGATGAAATTATTTCAAGGGGTAAATAG 1428 0.3508 MDDEVKVIHQCQVSPPQGSLPSSITIPLSYLDLPWFRCPYMKRIYYYNFPHSTQHFLQTSLPILKNSLSLTLQHFFPFSSKTVFPPKPKTPYILYSQGDSISFTICESKSNFNHLISNSPKDLAISNPFAPLIPSPSILQDGTLLFPILAIQITLFPNSGLTICLTFRHEIADGKSFHHFIKYWSLLSSGNLGNSSLSLPLHNRDIIQDTKNLKQSFLEQLWNSPPKTIESTSSNNNMVRHRFILTHHQVEKLKRWIVTKSKTIGLETLHLSTFVVTCSLFWVSKVKTQSQHDTNKSIVDCVFDNDFDDNYGFGFLMDLRDHFKISTNYFGNCLGSCIVALPKRKLSGENGICEAVNSIGIEIKGLIDPLKRVEDLMFLQRIRDLDIKFQNITSVAASPKFNVYETNFGWGKPVLSEILHVENSSTFCLSSSKDEDRGIEVGMVLEAAQVKKFSDVLEAQLRDIVGLDEIISRGK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0417 475 Gene3D - 4 233 IPR023213 -
Mtr3g0417 475 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 3 465 - -
Mtr3g0417 475 Pfam Transferase family 9 458 - -
Mtr3g0417 475 Gene3D - 235 463 IPR023213 -
Mtr3g0417 475 PANTHER - 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0417 Mtr-Chr3 5321860 5323287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0417 31 457 Monolignol Biosynthesis Gene Families AT5G48930 20.721 3.88e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0417 - - mtr:MTR_7g015860 633.254