Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0412 ATGGCCACTAGTACGAACGAAACACTCTCAACTCATGTGAAGGTGTTGCTAGACAAAATTGTTTCTAATCATGGGTTCATGGACAACTTCCGGACCACTAAGCTTGACCTTTCACTCTTGAAAAAACTCGAGAAAAAACTGCTGAGGATTTTAGATGTACTTCATTATGCTTCTGTTGCTGATGTCAATGAATGGTGGTTGGATACGCTGAGGTATGCTCTCTTTGAAGTTGATAATTTGTTTTACGAAATCAAGACTGAGGCGTTACGCTGCAAAGTAGAAGCTGAGCATCAAATTGCTACTACATCTCAGGTGCATTATCTTTATTCTCCTTTCACAAGGTTTGATAGGGTCAGCAATTCTCAAATGCAGAAATTAATTGGAAGATTAGAATTCTTGAGTTCTATTTATAGAAGAAACAATGATGTAAAGAAACTTAAACATCTTTTATTTTCTAATGATGGAGATGATCAAATAAGAATTATTTCCATCGTGGGAATGGTAGGGATTGGTAAAACAGCCCTTGCTAAACTCCTTTACAACGATCCTCATGTAAAGGACAAATTTGAGTTAAAACTGTGGGTAGATATGTCAAAATATTATGAGGATTTTGTTGATATCAGTGTTTTTGAAACCAACATTAAATCTATCACTTCACATGCAATCATCAATCATAACTTGGATGCAGAAGGAAACATTGACGTGAATATCGTGTACCCAAATTTTTTATTAGTATTGGATGACGTTTTGGATGCAAGATCTGTCAATTGGACATTACTGATGGATATGTTAAACGCTCAGAAAACGGGTAGCACAATTATCATCACAACACGAGATGAAAGAGTTCCAAAATCCATGGAAAGCTTTTTTTATGTCCACTATTTGAGACCTTTGGAAAGCGAAGATTGCTGGTCTATAGTTGCCAGACATGCATTTGGACCACGTAACTACCAAAAACTATCAAATCTTGAAGAAATTGGAAGGAAAATTGCAGAAAAGTGTGATGGATTACCATTAGCTGCAGTAACAGTTGCGAGTTTTCTTCGTGAAGAATTTTCCCAGGATTACTGGAATAATGTGCTAATACGTGACATTTGGGAATTGGTACAATATGTCGTCCAACCTGCGCTACAATCGAGCTACAATTCTCTTTCAGCTCCTTTAAAACAGTGCTTTGAATATTGTTCAATTTTTCCGAAGAAATACATCTTAGAAAAAAATGTGGTGGTTCAGTTGTGGATTGCAGAAGGGTTGGTAGAATCCTCCGCAGATCAGGAAAAAGTCGGAGAAGAGTACTTTGATGAACTAGTGTCAAGATCGTTGATACATCGACAATCTATTGGCAATGAGGAAGCAAACTTTGAAATGCATAGCCTCCTCCATGATTTTGCCACAATGGTTTCATCTTCATATTGTACCAGGTTGGACGAACAGAACTTACATCAAAGGATACGTAATTTATCATACAATAGAGGGCTATATGACTCATTTAATAAATTTGATAAATTGTATGCAGTAAAAGGTCTACGTACCTTTCTAGCATTACCATTACAAAAACAACTACATTTTTGTTTGTTATCAAACAAGGTAGTACATGACTTGCTGCCAACAATGAAACAATTACGCGTGTTGTCTTTGTCAAACTACAGGAGTATCACCGAGGTTCCCAACTCTATTGAAAATTTGTTATACCTGAGGTACTTAAATCTTTCCCACACTAAGATTGAAAGGTTGCCTTCTGCAACATGCAAGCTTTATAATCTGCAGTTCTTGTTGTTGGCAGGCTGTAGAAGGCTCATTGAGTTGCCAGAGGACATGGGGAAATTGGTTAATCTACATCACCTTGACATTAGTGACACTGCATTGAGGGAGATGCCCGTACAAATAGCCAAACTAGAAAATCTCCATACTTTGTCCGACTTTGTTGTCAGCAAGCATAATGATGGATTGAAGCTAGCGGAGCTGGGAAAATTTCCCCACCTGCATGGAAAACTTTCCATCTCACAGCTACAAAATGTTAATGACACATTTGAAGCAGATCAAGCCAAGATTAAGATGAAAGAACAAATAGAAGATTTAGCTTTAGAATGGGACCGTGGTACTACTTTCCCTGATTCACCAATTCAAAGTGTTGTACTTGAACGTTTGCAACCCTCAACAAATTTGAAAAGTCTCACCTTAAAAGGCTACGGTGGATTCAGCTTTCCAAATTGGTTGGGTGATTTTTTATTCAGCAACATGGTGTACTTAAGGATCTCGAATTGTGATGATTGTTTATGGCTTCCACCCCTTGGACAATTGGGTAATCTGAAAAAACTCATTATTGAAGGGATGCAATCAGTAGAGACAATTGGTACTGAGTTCTATGGAAGTGACGGTTCTCTTTCATTTCAACCATTTCCCTGCTTGGAGACTTTATACTTTGAGAACATGCAAGAGTGGGAGGAATGGAACCTGATTGGAGGTACGGCTAAGGAGTTTCCTAGTCTGAAAACTTTATCACTAAGTAAGTGCCCGAAACTGAGAGTAGGTAACATACTTGACAAATTTCTTTCCTTAACTGAATTTGAGTTAAGAGAATGTCCTCTATTGGTGCAATCAAGGCCATCATCAGATCCTGTGTTCACAACAAATTCTCTTCAACAGTTGACTATAGACGTCTTTCCATCTTATATGTCTTTCCCAACAGTCAGTCTACCAAAAACCTTGAAGTCTCTCATAATCAGTAACTGTGAGAGTCTAGAGTTCCTTCCTCATGAATACTTGCACCATTACACATCACTTGAAGAATTGAAAATATCTTATAGTTGTGATTCAATGACATCATTTCCCTTGGGCGCTCTCCCTGTCCTCAAGAGTCTCTTTATTGAGGGTTGTAGAAATCTGAAATCGATATTAATTGCAGAAGACGGGTCGCAGAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAACTGAAGTCATTTATGCCATGCGGATTGCACACTCCAAACCTCATTCACTTTGCAGTTTGGAAATGTCAGAAGCTTTCTTCACTGCCAAAAGCAATGAACACTCAAACTGACCTTCAAGAAATGGAAATCGATGATCTTCCAAATCTTCAATCTTTTATCATAGATGATTTGCCTATCAGTTTACGGGAACTGACTGTTGGCTCTGTTGGAGGGATTATGTGGAACACCGAGCCAACTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAATGGCAATGCTATGGTGAACACGCTGATGGAGCCACTGCTACCTGCATCGCTTGACACACTATGTATCAGTGGTCTTAATGTTGCAAGCATTGATGGGAAGTGGCTTCAAAATCTCACTTCTCTCCAAAACCTTGAGATTGTTAACGCTCCCAAACTTAAGTCATTGCCAAAAAAAGGATTGCCTTCCTCTCTTTCGGTACTAAATATGACTCGCTGCCCATTGCTCAAAGCAAGTTTGGGAAGGAAGCGACGGAAAGAGTGGCGTAAGATTGCTCACATTCCCACCATAATTATCGATGATGAGTTGATCACATGA 3558 0.3867 MATSTNETLSTHVKVLLDKIVSNHGFMDNFRTTKLDLSLLKKLEKKLLRILDVLHYASVADVNEWWLDTLRYALFEVDNLFYEIKTEALRCKVEAEHQIATTSQVHYLYSPFTRFDRVSNSQMQKLIGRLEFLSSIYRRNNDVKKLKHLLFSNDGDDQIRIISIVGMVGIGKTALAKLLYNDPHVKDKFELKLWVDMSKYYEDFVDISVFETNIKSITSHAIINHNLDAEGNIDVNIVYPNFLLVLDDVLDARSVNWTLLMDMLNAQKTGSTIIITTRDERVPKSMESFFYVHYLRPLESEDCWSIVARHAFGPRNYQKLSNLEEIGRKIAEKCDGLPLAAVTVASFLREEFSQDYWNNVLIRDIWELVQYVVQPALQSSYNSLSAPLKQCFEYCSIFPKKYILEKNVVVQLWIAEGLVESSADQEKVGEEYFDELVSRSLIHRQSIGNEEANFEMHSLLHDFATMVSSSYCTRLDEQNLHQRIRNLSYNRGLYDSFNKFDKLYAVKGLRTFLALPLQKQLHFCLLSNKVVHDLLPTMKQLRVLSLSNYRSITEVPNSIENLLYLRYLNLSHTKIERLPSATCKLYNLQFLLLAGCRRLIELPEDMGKLVNLHHLDISDTALREMPVQIAKLENLHTLSDFVVSKHNDGLKLAELGKFPHLHGKLSISQLQNVNDTFEADQAKIKMKEQIEDLALEWDRGTTFPDSPIQSVVLERLQPSTNLKSLTLKGYGGFSFPNWLGDFLFSNMVYLRISNCDDCLWLPPLGQLGNLKKLIIEGMQSVETIGTEFYGSDGSLSFQPFPCLETLYFENMQEWEEWNLIGGTAKEFPSLKTLSLSKCPKLRVGNILDKFLSLTEFELRECPLLVQSRPSSDPVFTTNSLQQLTIDVFPSYMSFPTVSLPKTLKSLIISNCESLEFLPHEYLHHYTSLEELKISYSCDSMTSFPLGALPVLKSLFIEGCRNLKSILIAEDGSQKSLSFLRSIKIWDCNELKSFMPCGLHTPNLIHFAVWKCQKLSSLPKAMNTQTDLQEMEIDDLPNLQSFIIDDLPISLRELTVGSVGGIMWNTEPTWEHLTCLSVLRINGNAMVNTLMEPLLPASLDTLCISGLNVASIDGKWLQNLTSLQNLEIVNAPKLKSLPKKGLPSSLSVLNMTRCPLLKASLGRKRRKEWRKIAHIPTIIIDDELIT* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0412 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 24 919 IPR044974 GO:0006952
Mtr3g0412 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 921 1138 IPR044974 GO:0006952
Mtr3g0412 1185 SUPERFAMILY L domain-like 880 1156 - -
Mtr3g0412 1185 Gene3D Ribonuclease Inhibitor 468 641 IPR032675 -
Mtr3g0412 1185 Gene3D Ribonuclease Inhibitor 653 846 IPR032675 -
Mtr3g0412 1185 Gene3D Ribonuclease Inhibitor 847 994 IPR032675 -
Mtr3g0412 1185 Gene3D - 298 385 IPR042197 -
Mtr3g0412 1185 Gene3D Ribonuclease Inhibitor 1010 1163 IPR032675 -
Mtr3g0412 1185 SUPERFAMILY L domain-like 519 935 - -
Mtr3g0412 1185 Gene3D - 387 466 IPR036388 -
Mtr3g0412 1185 PANTHER OS05G0414200 PROTEIN 24 919 - -
Mtr3g0412 1185 PANTHER OS05G0414200 PROTEIN 921 1138 - -
Mtr3g0412 1185 Gene3D - 119 290 IPR027417 -
Mtr3g0412 1185 PRINTS Disease resistance protein signature 161 176 - -
Mtr3g0412 1185 PRINTS Disease resistance protein signature 236 250 - -
Mtr3g0412 1185 PRINTS Disease resistance protein signature 334 348 - -
Mtr3g0412 1185 PRINTS Disease resistance protein signature 825 841 - -
Mtr3g0412 1185 Pfam NB-ARC domain 140 393 IPR002182 GO:0043531
Mtr3g0412 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 395 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0412 Mtr-Chr3 5203711 5209575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0412 552 647 WRKY Transcription Factor Family AT4G12020 37.113 2.45e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0412 - - mtr:MTR_0603s0010 1456.04