Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0392 ATGGAAGCCCTTGCTGTTACAGTCTTGGAAAAGTTGAGTTCTGCAGCTTACAAAGAGCTTGAAATCATTTGGAATCTCAAAGAGGATATCGAACGAATGAAGAACACAGTCTCCATGATAAAAGCTGTTCTCCTCGATGCAGAGGCCAAGGCCAATAACCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTAGATGATTTTTCTGTTGAAAATTTGAGAAGAAAAGTAATGGCTGGAAAAAACATAGTAAAACAGACACGATTTTTCTTCTCAAAATCAAACAAAGTAGCCTATGGTCTTAAACTGGGCCATAAAATGAAAGAAATCCAAAAGAGGCTAGATGACATTGCTAAAACTAAGCAGGCTCTGCAGCTGAATGACCGCCCTATGGAAAATCCAATTGCATATAGGGAGCAGAGACAAACTTACTCATTTGTGAGTAAAGATGAAGTTATTGGAAGAGATGAGGAAAAGAGATGTATTAAAAGTTATCTACTAGATGACAATGCAACAAATAATGTTTCTATAATTCCCATAGTTGGGATTGGAGGATTAGGTAAGACTGCACTTGCTCAACTTGTCTACAATGATAATGATGTTCAAAGGTATTTTGAGCTAAAAATGTGGGTGTATGTCTCGGATGAATTTGATATAAAGAAAATATCTCGGGAGATCGTTGGGGATGAAAAGAATAGTCAGATGGAGCAAGTGCAACAACAACTTCGAAACAAAATTCAAGGGAAAAAGTTTTTGCTCGTGTTGGATGACATGTGGAACGAGGATCGTGAGTTGTGGCTTAAATTGAAGAGCTTGTTAATGGAAGGAGGAAAAGGAAGCATGGTAATTGTTACAACGCGTAGTCAAACAGTGGCAAAAATAACAGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAAATCCCAGGAGCTATTCTCTCGAGTGGCTTTCAGCGTGTCGAAAGAACGAAATGATTTGGAGTTGTTAGCTATAGGAAGGGACATTGTTAAGAAATGTGCTGGCATTCCCCTTGCCATAAGAACTATTGGCAGCCTTTTGTTTTCTCGAAATTTGGGCAAGAGTGATTGGCTATATTTCAAAGATGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCATCGTTTCTAAAAAAATGTTTTGCTTATTGTTCATTGTTTCCTAAAGGTTTTGTGTTTGAAAAGAAAACACTCATTCAGTTATGGGCAGCTGAGGGGTTTATCCAACCATCAAATGATGTTAGACGTGTAGAAGATGTTGGCCATGAGTACTTCATGAGTTTGCTGTCAATGTCCTTCTTCCAAGATATCACTGTAGACGATTGTGGTGACATTTGTAATTGTAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATGGTCGGGAATGAATATGTCATGGCTGAAGGAGAAGAAGCAAACATTGGAAACAAAACACGTTTTTTATCATCTCATAATGCATTACAGTTTGCACTGACATCATCATCTTCCTACAAGTTAAGAACATTTCTCTTATGCCCAAAAACGAATGCAAGCAATTATCTGCGTCAGTCAAACGTTCTTTCCTTTTCAGGCTTAAAGTTCTTACGTGTGTTGACACTTTGTGGATTGAATATTCTGGCAATCCCAAATAGTATTGAAGAGATGAAGCATCTGAGATATATTGATCTATCAAAGAGTATTGTACTTAAAGATCTTCCGCCGGGCATTACTAGCCTACAGAACCTTCAAACTCTAAAACTTTCTGATTGTTCTGAGCTCGAAATATTACCAGAAAATCTCAACAAAAGTCTTAGGCATCTTGAGTTGAATGGTTGTGAGAGATTGAGATGTATGCCACAAGGGTTAGTACAGTTGGTTAATCTTCAAACACTGACACTTTTTGTACTGAACAATAGAAGTACGAACGTAAATGAGTTAGGTGAGCTAAACAACCTTAGAGGAAGATTAGAAATAAAAAGGTTGGATTTCCTGCGAAACGCTGCTGCAGAGATTGAATTTGTAAAAGTACTTCTTGAGAAGGAACACCTTCAGCTATTGGAATTACGGTGGACGTATGATGAAGATTTTATTGAGGATTTTCGTCATTGGTCATCATTGCCTAAAAGGGTCATACAAGAAAACAAACACCGGTTGGAAGATGAGAAGATTTTAGAAGGTCTGCAGCCACACCATTCGCTTCAAAAACTAGTTATAGATGGGTTTTGCGGCAAAAAGTTACCAGACTGGATAGGGAATCTCTCATCGCTCTTGACTCTTGAGTTCCACAATTGCAATGGTTTGACATCACTGCCCGAAGCGATGCGTAACCTTGTATCTTTGCAGAAACTTTGCATGTATAACTGCTCATTATTAGAGGAAAGATATGCAAAACCATATGGTCAAGACTGGCGTAAAATCTCTCGCATCCGAAAAGTTGAGATCCTTCCTATGAGACCATCATTACTCAAGTATTTTACTTGA 2559 0.3802 MEALAVTVLEKLSSAAYKELEIIWNLKEDIERMKNTVSMIKAVLLDAEAKANNHQVSNWLEELKDVLYDADDLLDDFSVENLRRKVMAGKNIVKQTRFFFSKSNKVAYGLKLGHKMKEIQKRLDDIAKTKQALQLNDRPMENPIAYREQRQTYSFVSKDEVIGRDEEKRCIKSYLLDDNATNNVSIIPIVGIGGLGKTALAQLVYNDNDVQRYFELKMWVYVSDEFDIKKISREIVGDEKNSQMEQVQQQLRNKIQGKKFLLVLDDMWNEDRELWLKLKSLLMEGGKGSMVIVTTRSQTVAKITGTHPPLFLKGLDSQKSQELFSRVAFSVSKERNDLELLAIGRDIVKKCAGIPLAIRTIGSLLFSRNLGKSDWLYFKDVEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFAYCSLFPKGFVFEKKTLIQLWAAEGFIQPSNDVRRVEDVGHEYFMSLLSMSFFQDITVDDCGDICNCKMHDLMHDLAQLMVGNEYVMAEGEEANIGNKTRFLSSHNALQFALTSSSSYKLRTFLLCPKTNASNYLRQSNVLSFSGLKFLRVLTLCGLNILAIPNSIEEMKHLRYIDLSKSIVLKDLPPGITSLQNLQTLKLSDCSELEILPENLNKSLRHLELNGCERLRCMPQGLVQLVNLQTLTLFVLNNRSTNVNELGELNNLRGRLEIKRLDFLRNAAAEIEFVKVLLEKEHLQLLELRWTYDEDFIEDFRHWSSLPKRVIQENKHRLEDEKILEGLQPHHSLQKLVIDGFCGKKLPDWIGNLSSLLTLEFHNCNGLTSLPEAMRNLVSLQKLCMYNCSLLEERYAKPYGQDWRKISRIRKVEILPMRPSLLKYFT* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0392 852 Gene3D - 314 400 IPR042197 -
Mtr3g0392 852 Pfam NB-ARC domain 172 402 IPR002182 GO:0043531
Mtr3g0392 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Mtr3g0392 852 PANTHER DISEASE RESISTANCE PROTEIN RP 26 811 IPR044974 GO:0006952
Mtr3g0392 852 PRINTS Disease resistance protein signature 186 201 - -
Mtr3g0392 852 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g0392 852 PRINTS Disease resistance protein signature 351 365 - -
Mtr3g0392 852 PRINTS Disease resistance protein signature 603 619 - -
Mtr3g0392 852 Gene3D - 146 307 IPR027417 -
Mtr3g0392 852 Gene3D - 6 119 - -
Mtr3g0392 852 SUPERFAMILY L domain-like 480 816 - -
Mtr3g0392 852 Pfam Rx N-terminal domain 7 93 IPR041118 -
Mtr3g0392 852 PANTHER OS05G0414200 PROTEIN 26 811 - -
Mtr3g0392 852 Gene3D - 401 491 IPR036388 -
Mtr3g0392 852 Coils Coil 116 136 - -
Mtr3g0392 852 Gene3D Ribonuclease Inhibitor 529 833 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0392 Mtr-Chr3 4655788 4665176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0392 183 851 WRKY Transcription Factor Family AT5G45050 21.992 4.58e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0392 - - mtr:MTR_3g015500 1273.07