Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0391 ATGGAAGCCCTTGCTGTTACAATCTTGGAAAAGTTGAGCTCTGCAGCTTACAAAGAGCTCGGAATCATTTGGAATTTCAAAGAGGATATGGAACGAATGAAGAACACAGTCTCCATGATAAAAGCCGTGCTTCTCGATGCAGAGTCCAAGGCCAATAATCATCAAGTTAGTAATTGGTTGGAGAAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTAGATGATTTTTCCATTGAAGCTTTGAGAAGAAAAGTAATGGCTGGAAACAACAGAGTAAGACGTACAAAAGCTTTCTTCTCAAAATCAAACAAAATTGCCCATGGCCTTAAATTGGGCCGTCGAATGAAAGCAATCCAAAAGAGGCTAGATGACATTGCTAACAATAAGCATGCACTGCAACTGAATGACCGCCCTATGGAGAATCCAATTGTATATAGGGAACAGAGACAAACTTACTCTTTCGTAAGTACAGATGAAGTTATTGGAAGAAATGAGGAAAAGAAATGTATTAAAAGTTATCTACTAGATGACAATGCAACAAATAATGTTTCTATAGTTCCCATAGTTGGCATTGGAGGATTAGGTAAGACTGCACTTGCTCAACTAGTCTACAATGATAATGATGTTCAAAAGCATTTTGAGCTAAAAATGTGGGTGTATGTCTCGGATGAATTTGATTTGAAGAAAATATCTCGGGATATCATTGGGGATGAAAAGAATAGTCAAATGGAGCAAGTACAACAACAACTTAGAAACAAAATTGAAGGGAAAAAGTTTTTGCTTGTGTTAGATGACGTGTGGAATGAGGATCATGAGTTGTGGCTTAAATTGAAGAGCATGTTCATGGAAGGTGGAAAAGGAAGTATGATAATTGTTACAACGCGTAGTCAGACTGTGGCAAAAATAACAGGCACACATCCACCCCTTTTCCTAAAAGGTTTGGATTCACAAAAATTCCAGGAGCTATTCTCTCGAGTGGCTTTCGGCGAGTTGAAAGAACAAAATGATTTGGAGTTGTTAGCTATAGGAATGGACATTGTTAAGAAATGTGCTGGCATTCCCCTTGCCATAAGAACTATTGGCAGCCTTTTGTTTTCTCGAAATTTGGGCCGGAGTGACTGGCTTTATTTCAAGGATGCCGAGTTTTCAAAGATAGATCAACACAAGGATAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCATCGTTTCTAAAAAAGTGCTTTGCCTATTGTTCACTGTTTCCAAAAGGTTTTATGTTTGAAAAGAAGACACTCATTCAGTTATGGGTAGCTGAGGGGTTCGTTCAACAATCAAATGATATTAGATGTGTAGAAGATATTGGTCATGAGTACTTCATGAGTTTGCTGTCAATGTCTTTCTTTCAAGATGTTACTATAGACGATTGTGATGGAATAAGCACCTGTAAAATGCATGACATTATGTATGATCTAGCGCAACTAGTGACCGAGAATGAATATGTCGTGGTTGAAGGAGAAGAACTAAACATAGGAAACAGAACACGTTATTTGTCATCTCGTAGGGGTATACAACTATCACTAACATCATCATCTTCCTACAAGTTAAGGACATTTCATGTGGTCGGTCCACAATCAAATGCAAGCAATCGTTTGCTTCAGTCAGATGATTTTTCCTTCTCAGGCTTAAAGTTCTTGCGTGTGTTGACACTTTGTGGGTTGAATATTGAAGAAATCCCAAATAGTATTGAAGAAATGAAGCATTTAAGATATATTGATCTATCACGGAACAATGTACTTAAAAATCTTCCTCCGACCATTACTAGCCTACTGAACTTGCAAACTCTAAAACTTTCTGATTGTTCTAAGCTTGAAATATTGCCAGAAAATCTCAATAGAAGTCTCAGGCATCTTGAGTTAAATGGTTGCGAGAGTTTGACATGTATGCCACGTGGGCTAGGACAGTTGACTGATCTTCAAACACTAACACTTTTTGTACTGAACTCTGGAAGTACAAGTGTAAATGAGTTGGGTGAGCTAAACAACCTGAGAGGGAGATTAGAATTAAAAGGGTTGAAGTTCCTGCGAAATAATGCTGCAGAGATTGAATCTGCAAAAGTACTTGTTGAGAAGCGACACCTTCAACAATTGGAATTGCGATGGAATCATGTCGACGAGGATCCTTTTGAGGATGATCCTTTTGGAGTTTGGTATGTTAAACTATCGCAATTACCATACAACAATTCTGTGGAAGATGAGATCATTTTACAAGGCCTGCAGCCACACCACCATTCACTTCGAAAACTAGTTATAGATGGGTTTTGCGGCAAAAAGTTACCAGACTGGATATGTAATCTCTCATCGCTCTTGACTCTTGAGTTCCACAATTGCAGTAGTTTGACATCACCGCCTCCTGAACAAATGTGTAACCTTGTATCTTTGCGGACACTTCGCATTTCAAATTGCCCATTATTAAAATTGAGTAATATATCTGGCATCCGAGCAATCAAGATCATCAGGGACGGAACCAGGGTTCGGGATACGCCAATGAAATTCATTCCTGGGAGTCCATCATTACTCAAGTATTTTTCTTGA 2583 0.384 MEALAVTILEKLSSAAYKELGIIWNFKEDMERMKNTVSMIKAVLLDAESKANNHQVSNWLEKLKDVLYDADDLLDDFSIEALRRKVMAGNNRVRRTKAFFSKSNKIAHGLKLGRRMKAIQKRLDDIANNKHALQLNDRPMENPIVYREQRQTYSFVSTDEVIGRNEEKKCIKSYLLDDNATNNVSIVPIVGIGGLGKTALAQLVYNDNDVQKHFELKMWVYVSDEFDLKKISRDIIGDEKNSQMEQVQQQLRNKIEGKKFLLVLDDVWNEDHELWLKLKSMFMEGGKGSMIIVTTRSQTVAKITGTHPPLFLKGLDSQKFQELFSRVAFGELKEQNDLELLAIGMDIVKKCAGIPLAIRTIGSLLFSRNLGRSDWLYFKDAEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFAYCSLFPKGFMFEKKTLIQLWVAEGFVQQSNDIRCVEDIGHEYFMSLLSMSFFQDVTIDDCDGISTCKMHDIMYDLAQLVTENEYVVVEGEELNIGNRTRYLSSRRGIQLSLTSSSSYKLRTFHVVGPQSNASNRLLQSDDFSFSGLKFLRVLTLCGLNIEEIPNSIEEMKHLRYIDLSRNNVLKNLPPTITSLLNLQTLKLSDCSKLEILPENLNRSLRHLELNGCESLTCMPRGLGQLTDLQTLTLFVLNSGSTSVNELGELNNLRGRLELKGLKFLRNNAAEIESAKVLVEKRHLQQLELRWNHVDEDPFEDDPFGVWYVKLSQLPYNNSVEDEIILQGLQPHHHSLRKLVIDGFCGKKLPDWICNLSSLLTLEFHNCSSLTSPPPEQMCNLVSLRTLRISNCPLLKLSNISGIRAIKIIRDGTRVRDTPMKFIPGSPSLLKYFS* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0391 860 PANTHER DISEASE RESISTANCE PROTEIN RP 26 826 IPR044974 GO:0006952
Mtr3g0391 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Mtr3g0391 860 Pfam NB-ARC domain 175 402 IPR002182 GO:0043531
Mtr3g0391 860 SUPERFAMILY L domain-like 480 830 - -
Mtr3g0391 860 Gene3D Ribonuclease Inhibitor 528 839 IPR032675 -
Mtr3g0391 860 Gene3D - 6 131 - -
Mtr3g0391 860 PRINTS Disease resistance protein signature 186 201 - -
Mtr3g0391 860 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g0391 860 PRINTS Disease resistance protein signature 351 365 - -
Mtr3g0391 860 PRINTS Disease resistance protein signature 604 620 - -
Mtr3g0391 860 Pfam Rx N-terminal domain 8 93 IPR041118 -
Mtr3g0391 860 Coils Coil 688 708 - -
Mtr3g0391 860 Gene3D - 315 400 IPR042197 -
Mtr3g0391 860 Gene3D - 145 307 IPR027417 -
Mtr3g0391 860 PANTHER OS05G0414200 PROTEIN 26 826 - -
Mtr3g0391 860 Coils Coil 116 136 - -
Mtr3g0391 860 Pfam Leucine rich repeat 545 594 IPR001611 GO:0005515
Mtr3g0391 860 Gene3D - 401 491 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0391 Mtr-Chr3 4646584 4653013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0391 183 860 WRKY Transcription Factor Family AT5G45050 23.521 4.26e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0391 - - mtr:MTR_3g015500 1437.94