Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0390 ATGGAAGCCCTTGCTTTTACAGTCTTGGAAAAGTTGAGCTCTGCAGCTTACAAAGAGCTCGAAATCATTTGGAATTTCAAAGAGGATATGGAACGAATGAAGAACACCGTCTCCATGATAACAGCCGTGCTTCTCGATGCAGAGGCCAAGGCCAATAATCATCAAGTTAGTAATTGGTTGGAGAAACTGAAAGATGTACTTTACGATGCAGATGATTTACTAGAAGATTTTTCCATCGAAGCTTTGAGAAGAAAAGTGATGGCTGGAAACAACAGAGTAAGACGGACGCAAGCTTTCTTCTCAAAATCAAACAAAATTGCCTGTGGCCTTAAATTGGGCTATCGAATGAAAGCAATCCAAAAGAGGCTAGATGACATTGCTAAAACTAAGCATGATCTGCAGCTGAATGACCGCCCTATGGAGAATCCAATTGCATATAGGGAGCAGAGACAAACTTACTCATTTGTGAGTAAAGATGAAGTTATTGGAAGAGATGAGGAAAAGAAATGTATTAAAAGTTATCTACTAGATGACAATGCAACAAATAATGTTTCTATAATTCCCATAGTTGGCATTGGAGGATTAGGTAAGACTGCACTTGCTCAACTTGTCTACAATGATAATGATGTTCAAGGGCATTTTGAGCTAAAAATGTGGGTGCATGTCTCGGATGAATTTGATATAAAGAAAATATCTAGGGATATCATTGGGGATGAAAAGAACGGTCAAATGGAGCAAGTACAACAGCAACTTAGGAACAAAATTGAAGGGAAAAAGTTTTTGCTTGTGTTAGATGACGTGTGGAATGAGGATCATGAGTTGTGGCTTAAATTGAAGAGTATGTTCATGGATGGAGGAAAAGGAAGTATGATAATTGTTACAACTCGTAGTCAGACTGTGGCAAAAATAACGGGCACACATCCACCCCTTTTCCTAAAAGGTTTGGATTCACAAAAATCCCAGGAGCTATTCTCTCGAGTGGCCTTCTGCGAGTTGAAAGAACAAAATGATTTGGAGTTGTTAGCTATAGGAATGGACATTGTTAAGAAATGTGCTGGCGTTCCCCTTGCCATAAGAACTATTGGCAGCCTTTTGTTTGCTCGAAATTTGGGCCGGAGTGACTGGCTTTATTTCAAGGATGCCGAGTTTTCAAAGATAGATCAACACAAGGATAAAATCTTTGCAATCCTTAAACTGAGTTATGATCATCTTCCGTCGTTTCTAAAAAAGTGCTTTGCCTATTGTTCACTGTTTCCAAAAGGTTTTATGTTTGAAAAGAAGACACTGATTCAGTTATGGGTAGCTGAGGGGTTCATTCAACAATCAAATGATATTAGATGTGTAGAAGATGTTGGTCATGAGTACTTCATGAGTTTGCTGTCAATGTCTTTCTTTCAAGATGTTTCTATAGACGATTGTGGTGGAATAAGTACCTGTAAAATGCATGACATTATGCATGATCTAGCGCAACTAGTGACCGGGAATGAATATGTCGTGGTTGAAGGAGAAGAACTAAACATAGGAAACAGAACACGTTATTTGTCATCTCGTAGGGGTATACAACTATCACCAATCTCATCATCTTCCTACAAGTTAAGGACATTTCACGTGGTCAGTCCACAAATGAATGCAAGCAATCGTTTTCTTCAGTCAGATGTTTTTTCCTTCTCAGGCTTAAAGTTCTTGCGTGTGTTGACACTTTGTGGGTTGAATATTGAAGAAATCCCAAATAGTATTGAAGAAATGAAGCATTTAAGATATATTGATCTATCACGGAACAATGTACTTAAAAATCTTCCTCCGACCATTACTAGCCTACTGAACTTGCAAACTCTAAAACTTTCTGATTGTTCTAAGCTTGAAATATTGCCAGAAAATCTCAATAGAAGTCTCAGGCATCTTGAGTTAAATGGTTGCGAGAGTTTGACATGTATGCCATGTGGGCTAGGACAGTTGACTGATCTTCAAACACTAACACTTTTTGTACTGAACTCTGGAAGTACAAGTGTAAATGAGTTGGGTGAGCTAAACAACCTGAGAGGGAGATTAGAATTAAAAGGGTTGAATTTCCTGCGAAATAATGCTGAAAAGATTGAATCTGCAAAAGTACTTCTTGAGAAGTGA 2124 0.3832 MEALAFTVLEKLSSAAYKELEIIWNFKEDMERMKNTVSMITAVLLDAEAKANNHQVSNWLEKLKDVLYDADDLLEDFSIEALRRKVMAGNNRVRRTQAFFSKSNKIACGLKLGYRMKAIQKRLDDIAKTKHDLQLNDRPMENPIAYREQRQTYSFVSKDEVIGRDEEKKCIKSYLLDDNATNNVSIIPIVGIGGLGKTALAQLVYNDNDVQGHFELKMWVHVSDEFDIKKISRDIIGDEKNGQMEQVQQQLRNKIEGKKFLLVLDDVWNEDHELWLKLKSMFMDGGKGSMIIVTTRSQTVAKITGTHPPLFLKGLDSQKSQELFSRVAFCELKEQNDLELLAIGMDIVKKCAGVPLAIRTIGSLLFARNLGRSDWLYFKDAEFSKIDQHKDKIFAILKLSYDHLPSFLKKCFAYCSLFPKGFMFEKKTLIQLWVAEGFIQQSNDIRCVEDVGHEYFMSLLSMSFFQDVSIDDCGGISTCKMHDIMHDLAQLVTGNEYVVVEGEELNIGNRTRYLSSRRGIQLSPISSSSYKLRTFHVVSPQMNASNRFLQSDVFSFSGLKFLRVLTLCGLNIEEIPNSIEEMKHLRYIDLSRNNVLKNLPPTITSLLNLQTLKLSDCSKLEILPENLNRSLRHLELNGCESLTCMPCGLGQLTDLQTLTLFVLNSGSTSVNELGELNNLRGRLELKGLNFLRNNAEKIESAKVLLEK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0390 707 Gene3D - 146 307 IPR027417 -
Mtr3g0390 707 Gene3D Ribonuclease Inhibitor 525 705 IPR032675 -
Mtr3g0390 707 Pfam Rx N-terminal domain 7 93 IPR041118 -
Mtr3g0390 707 Pfam NB-ARC domain 173 402 IPR002182 GO:0043531
Mtr3g0390 707 PRINTS Disease resistance protein signature 186 201 - -
Mtr3g0390 707 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g0390 707 PRINTS Disease resistance protein signature 351 365 - -
Mtr3g0390 707 PRINTS Disease resistance protein signature 604 620 - -
Mtr3g0390 707 Gene3D - 6 116 - -
Mtr3g0390 707 PANTHER DISEASE RESISTANCE PROTEIN RP 8 676 IPR044974 GO:0006952
Mtr3g0390 707 PANTHER OS10G0130600 PROTEIN 8 676 - -
Mtr3g0390 707 SUPERFAMILY L domain-like 480 688 - -
Mtr3g0390 707 Coils Coil 116 136 - -
Mtr3g0390 707 CDD RX-CC_like 2 128 IPR038005 -
Mtr3g0390 707 Gene3D - 401 491 IPR036388 -
Mtr3g0390 707 Gene3D - 314 400 IPR042197 -
Mtr3g0390 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0390 Mtr-Chr3 4624573 4630561 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0390 183 691 WRKY Transcription Factor Family AT5G45050 23.091 1.77e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0390 - - mtr:MTR_3g015500 1381.7