Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0389 ATGGCACAGTTTCATGTTTTGGCTGTTGATGACAGTGTTATTGACAGAATGTTGATTGAAAGGCTTCTCAAAACCTCTTCATTTCATGTTACTGTGGTTGATTCTGGAACTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAGGTGAGGAATGAAAAGCCTCATTCTATTGCTGCAGAAACAGATCAGGTTGTAGAAGTGAATCTGATCATAACTGATTACTGTATGCCAGGAATGACAGGCTATGATCTGCTGAGAAAGATTAAGGAATCTAATTCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATTAACAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTGAACAAGCTGAAACCACATTTGTTGAAGACAAAAGTTAAGAATGAAGATGACCTAATCAACAACAAAAGAAGGATACATAACAATGCAATTCCATTGAAAAACTAG 504 0.369 MAQFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKTKVKNEDDLINNKRRIHNNAIPLKN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0389 167 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 161 - -
Mtr3g0389 167 CDD REC_typeA_ARR 6 136 - -
Mtr3g0389 167 ProSiteProfiles Response regulatory domain profile. 5 141 IPR001789 GO:0000160
Mtr3g0389 167 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 161 IPR045279 GO:0009736
Mtr3g0389 167 SUPERFAMILY CheY-like 3 141 IPR011006 -
Mtr3g0389 167 Pfam Response regulator receiver domain 6 133 IPR001789 GO:0000160
Mtr3g0389 167 Gene3D - 5 161 - -
Mtr3g0389 167 SMART REC_2 4 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0389 Mtr-Chr3 4621176 4623277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0389 2 148 Response Regulator Gene Family AT3G57040 70.946 1.25e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr3g0389 Response_reg 1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0389 K14492 - gmx:100818762 254.988