Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0384 ATGTCCATGGCAGAGTTGGTTGGTGGAGCGTTTCTTTCATCATTCTTTCAGGTGGCTCTTGAGAAATTGTCTTCCAATGATTTCATTGACTATTTTCGTGGAAGCAAACTTGATGATAAACTGCTAGAGAAACTTCTAATAACACTCAATTCTATCAACCGTGTGTTGGAAGAAGCGGAGATGAAGCAGTACCAAAGCATGTCCGTGAAGAAGTGGCTTGATGATCTTAAACATAATGCATATGAGGTTGACCAGCTGTTAGATGAGATTGCAACTGATGCACCATTGAAGAAGCAGAAATTTGAACCTTCTACTAGCAAGGTATTCAACTTCTTTTCATCTTTCATTAATCCATTTGAATCTAGGATCAAAGAATTGCTAGAGAAGTTAGAATTTCTTGCGAAGCAAAAGGATATGCTCGGACTGAAACAAGACACCTGTGCTAGTAGTGAAGGTGGACTCAGTTGGAAACCCTTGATAAGATTTCCAACTACATCTTTGGTGGATGGATCGAGCATATATGGTAGAAACGGTGACAAAGAGGAGTTAGTCAACTTTTTACTGTCTGACATAGACAGCGGCAACCAAGTACCAATAATCAGCATAGTGGGTCTCGGTGGAATGGGTAAGACCACTCTTGCTCAGCTTGTGTACAATGACCGCAGGATGAAAGAGCATTTTGAACTTAAAGCTTGGGTCTACGTTTCAGAAACTTTTGATGTTGTTGGACTTACCAAAGCAATTCTGAGGTCATTTCACTCTTCAACACATGCTGAAGAGTTTAATCTGCTCCAACATCAATTGCAGCACAAACTAACTGGTAAGAAATATTTGCTTGTTTTAGATGATGTCTGGAATGGGAATGAGGAAGGTTGGGAGCGCTTACTACTTCCCCTATGCCATGGATCTACTGGAAGTGGAAGTAAAATTATTGTGACAACTCGTGACAAGGAGGTAGCATCTATCATGAAGTCCACCAAGGAGCTTAATTTAGAGAAACTGAATGAAAGTGAATGTTGGAGAATGTTTGTGAGACATGCTTTTCACGGAAGGAATGCAAGTGAGTATCCAAATCTTGTATCAATTGGCAAGAAAATTGTAGATAAGTGTGTAGGGTTTCCATTAGCTGTAAAAACGTTGGGAAATCTCTTGCGAAGAAAATTCTCTCAACGTGAATGGGTTAGGATATTGGAGACCGATATGTGGCATTTATCAGAAGGTGACAATAACATTAATTCAGTACTGAGATTGAGTTACCATCATCTCCCTTCCATTCTTAAACGTTGTTTTTCTTATTGTTCCATATTTCCCAAAGGTCACATTTTTGACAAGCGTGAATTAATCAAGCTTTGGATAGCGGATGGTTTGTTGAAGTGTTGCGGAAGTGACAAAAGTGAAGAAGAGTTGGGTAATGAGTTATTTGTTGATCTAGAATCAATTTCATTTTTCCAGAAATCAATACATGACGATAAGCGTTTTGTAATGCACAATCTTATCAACGATTTAGCAAAATCGATGGTAGGAGAATTTTGCTTGCAGATAGAGGATGATAAGGAGCGACATGTCACTGAAAGGACACGACACATTTGGTGTTCTCTTCAATTAAAAGATGGTGATAAAATGACACAACACATTTATAAGATTAAGGGATTACGTAGTTTAATGGCACAAGGCGGCTTTGGTGGCAGACACCAGGAGATATGCAACACAATACAACAAGATTTGTTTTCAAAGCTAAAATGTTTGCGGATGTTATCATTGAAACGTTGTAACCTTCAAAAGTTAGATGATAAGATAAGCAATTTAAAGCTTATGCGTTATCTAGACCTATCTCTCACAAAGATTAAAAGGTTGCCTGATTCCATTTGTAACCTATATAATTTACAGACACTACTATTGGCATATTGTCCATTAACTGAGCTCCCTTCAGATTTTTACAAACTTACAAACTTACGTCATCTTGATCTGGAAGGCACTCTTATAAAGAAGATGCCAAAAGAGATAGGGAGGCTAAACCATCTTCAGACTCTGACTAAATTTGTTGTGGTAAAGGACCATGGGTCTGATATTAAGGAGTTGACGGAACTCAACCAGCTTCAAGGGAAACTTTGTATTTCAGGGTTAGAAAATGTCATTATTCCTGCAGATGCGCTAGAAGCAAAATTAAAAGATAAGAAGCATTTGGAAGAATTACATATCATATACAGTGCTTATACCACTAGAGAAATCAATAATGAAATGTCTGTCTTGGAGGCTCTTCAACCAAATAGCAACCTTAATAACTTGACCATCGAACACTACCGCGGCACTAGTTTTCCAAATTGGATTCGGGATTTTCATTTGTCCAGTTTAGTATCTCTAAATCTGAAAGGATGTCAACTTTGTTCCCAGTTGCCACCATTTGAGAAGTTTCCCTATCTCAATAATCTTTGTATTTCAAGCTGTCCTGGAATAGAGATCATTAATTCAATTGATGTTCCATTCAGGTTCCTTGAAATTTTGCGATTTGAGGACATGTCCAATTGGAAGGAATGGTTATGTGTTGAAGGTTTCCCTTTGCTTAAAGAGCTTTCTATACGTAATTGTCCAAAATTGACAAAATTTCTACCCCAACACCTTCCTTCTTTGCAGGGATTGGTGATTATTGATTGCCAAGAGTTGGAGGTTTCAATTCCCAAGGCTTCTAATATTGGTGAACTACAATTGGTAAGATGTGAAAACATTTTGGTAAATGATCTACCTTCCAAATTAACAAGCGCCGTCCTGTATGGAAATCAAGTCATTGCGTCTTACCTAGAGCAAATTCTATTCAACAATGCCTTTCTTAAGAGATTGAATGTTGGTGCCATCGATAGTGCAAATCTAGAATGGTCCTCTTTGGATTTGCCTTGCTATAAGTCTCTTGGCTTCCTTTCTATAAGAAACTGGCACTCCTCGTTTCCATTTTCCCTACACTTGTTCACCAATCTTAAATCTTTATACTTGTACGATTGTCCACAACTGGAGTCATTTCCAAGGAAGGCAACCCTCCCTGCCTGA 3039 0.383 MSMAELVGGAFLSSFFQVALEKLSSNDFIDYFRGSKLDDKLLEKLLITLNSINRVLEEAEMKQYQSMSVKKWLDDLKHNAYEVDQLLDEIATDAPLKKQKFEPSTSKVFNFFSSFINPFESRIKELLEKLEFLAKQKDMLGLKQDTCASSEGGLSWKPLIRFPTTSLVDGSSIYGRNGDKEELVNFLLSDIDSGNQVPIISIVGLGGMGKTTLAQLVYNDRRMKEHFELKAWVYVSETFDVVGLTKAILRSFHSSTHAEEFNLLQHQLQHKLTGKKYLLVLDDVWNGNEEGWERLLLPLCHGSTGSGSKIIVTTRDKEVASIMKSTKELNLEKLNESECWRMFVRHAFHGRNASEYPNLVSIGKKIVDKCVGFPLAVKTLGNLLRRKFSQREWVRILETDMWHLSEGDNNINSVLRLSYHHLPSILKRCFSYCSIFPKGHIFDKRELIKLWIADGLLKCCGSDKSEEELGNELFVDLESISFFQKSIHDDKRFVMHNLINDLAKSMVGEFCLQIEDDKERHVTERTRHIWCSLQLKDGDKMTQHIYKIKGLRSLMAQGGFGGRHQEICNTIQQDLFSKLKCLRMLSLKRCNLQKLDDKISNLKLMRYLDLSLTKIKRLPDSICNLYNLQTLLLAYCPLTELPSDFYKLTNLRHLDLEGTLIKKMPKEIGRLNHLQTLTKFVVVKDHGSDIKELTELNQLQGKLCISGLENVIIPADALEAKLKDKKHLEELHIIYSAYTTREINNEMSVLEALQPNSNLNNLTIEHYRGTSFPNWIRDFHLSSLVSLNLKGCQLCSQLPPFEKFPYLNNLCISSCPGIEIINSIDVPFRFLEILRFEDMSNWKEWLCVEGFPLLKELSIRNCPKLTKFLPQHLPSLQGLVIIDCQELEVSIPKASNIGELQLVRCENILVNDLPSKLTSAVLYGNQVIASYLEQILFNNAFLKRLNVGAIDSANLEWSSLDLPCYKSLGFLSIRNWHSSFPFSLHLFTNLKSLYLYDCPQLESFPRKATLPA* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0384 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 24 1004 IPR044974 GO:0006952
Mtr3g0384 1012 SMART LRR_typ_2 625 647 IPR003591 -
Mtr3g0384 1012 SMART LRR_typ_2 579 602 IPR003591 -
Mtr3g0384 1012 SMART LRR_typ_2 648 671 IPR003591 -
Mtr3g0384 1012 Gene3D - 419 506 IPR036388 -
Mtr3g0384 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 433 IPR027417 -
Mtr3g0384 1012 SUPERFAMILY RNI-like 831 1006 - -
Mtr3g0384 1012 Gene3D Ribonuclease Inhibitor 536 926 IPR032675 -
Mtr3g0384 1012 Pfam NB-ARC domain 179 421 IPR002182 GO:0043531
Mtr3g0384 1012 Coils Coil 123 143 - -
Mtr3g0384 1012 Gene3D - 20 128 - -
Mtr3g0384 1012 Pfam Rx N-terminal domain 11 99 IPR041118 -
Mtr3g0384 1012 Gene3D - 161 330 IPR027417 -
Mtr3g0384 1012 SUPERFAMILY L domain-like 494 885 - -
Mtr3g0384 1012 Gene3D - 333 418 IPR042197 -
Mtr3g0384 1012 Coils Coil 42 62 - -
Mtr3g0384 1012 PRINTS Disease resistance protein signature 199 214 - -
Mtr3g0384 1012 PRINTS Disease resistance protein signature 271 285 - -
Mtr3g0384 1012 PRINTS Disease resistance protein signature 370 384 - -
Mtr3g0384 1012 PRINTS Disease resistance protein signature 779 795 - -
Mtr3g0384 1012 PANTHER OS05G0414200 PROTEIN 24 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0384 Mtr-Chr3 4517876 4521957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0384 200 869 WRKY Transcription Factor Family AT5G45050 22.665 1.57e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0384 - - gmx:100777510 1058.9