Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0358 ATGGCGACTATTGTGGGAGAAGGGATTCTTTCAGCTTCTGTGAAACTATTGTTGCAAAAGATTGTTTCCGGTGAGTTCATCAACTTCTTTCGAAACATGAAGCTCGATGTTCCACTGTTGGATAAGCTGAAAATAACACTGTTGAGTCTTCAAGCTGTACTGAATGATGCTGAGGAGAAACAGATCGCTAATTCTGCTGTCAAGGAGTGGTTGAATATGCTGCAAGATGCTGTATTCGAAGCTGAAGATTTGTTTGACGAAATTAACACTGAGTCATTGCGGTGCAGAGTGGAAGCTGAGTATGAAACCCAATCTGCTAAGGTACTCAAAAAACTCTCTTCTCGTTTCAAAAGGTTTAATAGAAAGATGAATTCTAAATTGCAAAAGTTACTTGAAAGATTAGAACATTTGAGAAACCAGAATCATGGTTTAAAAGAAGGTGTTTCCAACAGTGTTTGGCATGGAACTCCTACAAGTTCTGTTGTGGGGGATGAATCTGCTATTTATGGCAGAGATGATGACAGAAAGAAACTGAAAGAGTTTTTACTTGCAGAGGATGTTGGAGATGGTCGAAGTAAAATAGGAGTGATTTCCATTGTGGGGATGGGAGGGCTAGGAAAAACAACGCTAGCTAAACTCCTTTACAATGACCATGATGTGAAGCAGAAATTTGAGGTAAGAGGGTGGGCACATGTCTCCAAAGATCTTAATGTTGTCACTGTCACTAAAACTCTTCTTGAATCTGTAACTTCAGAAAAAACCACCGCTAATGAATTGAATATTCTACAAGTGAAGTTGCAGCAAAGTTTAAGGAACAAAAGTTTTTTGCTAGTATTGGATGATATATGGTATGGAAGATATGTTGGTTGGAATAGTATGAATGACATCTTTAATGTTGGGGCAATAGGGAGTAAGATCATTATCACAACACGAGATGAAAGAGTTGCACTACCCATGCAAACCTTTCTTTATGTTCACCATGTAAGATCTTTGGAAACTGAAGATTGCTGGAATATACTTGCAAGTCATGCATTTGTAGAAAGAAACTACCAACAACAACCTGATCTAGAAAAAATTGGAAGAGAAATTGCCAAAAAGTGTGATGGGATACGATTAGCTGCAATAGCACTTAGGGGTCTTCTTCGCACCAAATTGTCACAAGATTATTGGAATGATGTTTTAAAAAGTAGTATTTGGGAATTAACAAATGACGAGGTTCAACCATCTCTGCTATTGAGCTATCGTTATCTTCCTGCTCCTTTAAAAGGATGTTTTGCTTATTGTTCAATTTTTTCGAAGAATTCAATCTTAAAGAAAAAAATGGTAGTTCAGTTGTGGATTGCAGAAGGTTTAGTACCTCAGCCTCAAAGTGAGAAAAGTTGGGAAAAAGTAGCCGAAGAATACTTTGATGAACTAGTGTCGAGGTGTCTGATACGTCAAAGGTCCATCGATGATCTGGAAGTAAGCTTTGAAATGCATGACCTCATCAATGATTTAGCTACGATAGTTTCATCTCCTTATTGTATTAGGTTGGAAGAACATAAGCCACATGAAAGGGTGCGACATTTGTCATACAATAGAGGGATATATGACTCGTATGATAAATTTGATAAATTGGATGATTTAAAAGGTCTACGAACCTTCTTATCCTTGCCATTACAAGAAGTTCAGTGGCTTTATTATTCCGTGTCAGGGAAGTTAGTTTGTGACTTGTTGCCACAAATGAAACAGTTACACGCGTTGTCTCTGTTAAAGTACTCAAATATCATTAAACTACCAAAATCTATTGGAAGTTTGATATACCTACGATACTTAAATCTCTCTGACACTATGATTGGAAGGTTGCCCTCTGAAACATGCAAGCTTTACAATCTGCAGACCTTGTTGTTGACAAATTGTTGGAATCTCACTAATTTGCCGAAGGACATGGGGAAATTAGTGAGTCTACGCCACCTTGACATCAGAGGCACTCAATTGAAGGAAATGCCCGTACAACTCTCCAAACTAGAAAATCTCCAAACCCTGTCGAGCTTTGTTGTTAGTAAACAAGACATTGGATTGAAGATTGCAGATTTGGGAAAATATTTCCATTTACAGGGAAGACTTTCCATCTCACAGCTTCAAAATGTAACTGATCCATCCCATGCTTTTCAAGCAAATTTGGAGATGAAGAAACAAATGGACGAGTTGGTACTAGGATGGTCAGATGATACCCCTTCAAATTCACAAATACAAAGTGCCGTGTTTGAACAGTTGCGTCCGTCGACAAATTTGAAGAGTCTTACCATCTTTGGCTATGGTGGAAACAGCTTTCCAAATTGGTTGGGTTGTTCTTTATTTGACAACATAGTGTATTTGAGGATTGCGGGTTGTGAAAATTGTTCAAGACTGCCACCCCTCGGACAATTAGGTAATCTCAAAAAACTCTTTCTTGGTAATCTAAAATCAGTAAAGAGTGTTGGTTCTGAGTTCTATGGAAGGGATTGTCCTTCGTTTCAACCATTTCCTTTATTGGAGACTCTAAGATTTCATACCATGCTAGAATGGGAAGAATGGACGTTGACTGGAGGTACATCTACAAAGTTTCCTCGCCTAACACAACTTTCGCTGATACGTTGTCCTAAACTCAAGGGAAACATACCCCTTGGACAATTAGGTAATCTAAAAGAACTCATTATTGTAGGGATGAAATCAGTGAAGACACTTGGTACTGAGTTCTATGGAAGTAGTAGTTCTCCTTTGATTCAACCATTTCTCTCCTTGGAGACTCTGAGGTTTGAGGATATGCAAGAGTGGGAGGAATGGAAACTGATTGGAGGTACATTGACAGAGTTTCCTAGTCTAACACGCCTGTCACTATATAAATGTCCGAAACTCAAAGGAAGCATACCGGGAAACCTTCCTCGTCATACAAGTTTGTCAGTGAAATGTTGTCCCGAACTTGAAGGGATTGCCCTCGACAACCTTCCTTCCCTTAGTGAACTTGAGTTAGAAGAGTGTCCTCTACTGATGGAGCCAATACATTCCGATGACAATAGCAACATTATAATTACAAGCACATCATCAATTGTATTCAACACTCTTCGAAAAATCACCTTTATAAATATTCCATCTCTAACTTCCTTCCCAAGAGATGGTCTGTCCAAAACATTACAATCTTTGAGTATCTGTGATTGTGAGAATCTGGAGTTCCTTCCTTATGAATCATTTCGCAATAACAAATCACTAGAGAATTTGAGCATATCCTCTAGTTGTAATTCAATGACATCGTTTACCTTGTGCTCTCTCCCTGTCCTCAAAACTCGATATTAA 3312 0.3853 MATIVGEGILSASVKLLLQKIVSGEFINFFRNMKLDVPLLDKLKITLLSLQAVLNDAEEKQIANSAVKEWLNMLQDAVFEAEDLFDEINTESLRCRVEAEYETQSAKVLKKLSSRFKRFNRKMNSKLQKLLERLEHLRNQNHGLKEGVSNSVWHGTPTSSVVGDESAIYGRDDDRKKLKEFLLAEDVGDGRSKIGVISIVGMGGLGKTTLAKLLYNDHDVKQKFEVRGWAHVSKDLNVVTVTKTLLESVTSEKTTANELNILQVKLQQSLRNKSFLLVLDDIWYGRYVGWNSMNDIFNVGAIGSKIIITTRDERVALPMQTFLYVHHVRSLETEDCWNILASHAFVERNYQQQPDLEKIGREIAKKCDGIRLAAIALRGLLRTKLSQDYWNDVLKSSIWELTNDEVQPSLLLSYRYLPAPLKGCFAYCSIFSKNSILKKKMVVQLWIAEGLVPQPQSEKSWEKVAEEYFDELVSRCLIRQRSIDDLEVSFEMHDLINDLATIVSSPYCIRLEEHKPHERVRHLSYNRGIYDSYDKFDKLDDLKGLRTFLSLPLQEVQWLYYSVSGKLVCDLLPQMKQLHALSLLKYSNIIKLPKSIGSLIYLRYLNLSDTMIGRLPSETCKLYNLQTLLLTNCWNLTNLPKDMGKLVSLRHLDIRGTQLKEMPVQLSKLENLQTLSSFVVSKQDIGLKIADLGKYFHLQGRLSISQLQNVTDPSHAFQANLEMKKQMDELVLGWSDDTPSNSQIQSAVFEQLRPSTNLKSLTIFGYGGNSFPNWLGCSLFDNIVYLRIAGCENCSRLPPLGQLGNLKKLFLGNLKSVKSVGSEFYGRDCPSFQPFPLLETLRFHTMLEWEEWTLTGGTSTKFPRLTQLSLIRCPKLKGNIPLGQLGNLKELIIVGMKSVKTLGTEFYGSSSSPLIQPFLSLETLRFEDMQEWEEWKLIGGTLTEFPSLTRLSLYKCPKLKGSIPGNLPRHTSLSVKCCPELEGIALDNLPSLSELELEECPLLMEPIHSDDNSNIIITSTSSIVFNTLRKITFINIPSLTSFPRDGLSKTLQSLSICDCENLEFLPYESFRNNKSLENLSISSSCNSMTSFTLCSLPVLKTRY* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0358 1103 PANTHER OS05G0414200 PROTEIN 31 878 - -
Mtr3g0358 1103 PANTHER OS05G0414200 PROTEIN 881 1066 - -
Mtr3g0358 1103 SUPERFAMILY RNI-like 827 1097 - -
Mtr3g0358 1103 Gene3D - 330 413 IPR042197 -
Mtr3g0358 1103 PRINTS Disease resistance protein signature 196 211 - -
Mtr3g0358 1103 PRINTS Disease resistance protein signature 269 283 - -
Mtr3g0358 1103 PRINTS Disease resistance protein signature 987 1003 - -
Mtr3g0358 1103 Coils Coil 40 60 - -
Mtr3g0358 1103 PANTHER DISEASE RESISTANCE PROTEIN RP 31 878 IPR044974 GO:0006952
Mtr3g0358 1103 PANTHER DISEASE RESISTANCE PROTEIN RP 881 1066 IPR044974 GO:0006952
Mtr3g0358 1103 Pfam Rx N-terminal domain 11 103 IPR041118 -
Mtr3g0358 1103 Gene3D - 414 502 IPR036388 -
Mtr3g0358 1103 Gene3D - 17 148 - -
Mtr3g0358 1103 CDD RX-CC_like 12 139 IPR038005 -
Mtr3g0358 1103 Gene3D Ribonuclease Inhibitor 553 853 IPR032675 -
Mtr3g0358 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 428 IPR027417 -
Mtr3g0358 1103 Coils Coil 120 147 - -
Mtr3g0358 1103 SUPERFAMILY L domain-like 492 895 - -
Mtr3g0358 1103 Pfam NB-ARC domain 193 395 IPR002182 GO:0043531
Mtr3g0358 1103 Gene3D Ribonuclease Inhibitor 854 1102 IPR032675 -
Mtr3g0358 1103 Gene3D - 153 323 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0358 Mtr-Chr3 4165781 4169240 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0358 541 684 WRKY Transcription Factor Family AT4G12020 30.464 2.40e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0358 - - mtr:MTR_1g037610 1519.21