Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0348 ATGGCATTTGTTGGAGAAGCATTCCTCTCAGCTTCTTTGGAAGTATTGCTAGACAGAATCATTCCTGATGAGTTACTATACTTTTCTAGGAACAAAGAACTTGACACATCACTCCTCAAAAAGCTGAAAATAACACTGTTGAGTCTTCAAGCTGTGATGAATGATGCTGAGGAGAAACAAATCACCAACCCTGCTGTTAAACAATGGTTGGATGAACTAAGAGATGCTCTCTATGATGCTGATGATTTGTTGGATGAAATCAACACTGAATCTTTGAGATGCAAATTGGAAGCTGAGTCTCAAATTCAACAACCTTTTAGTGATCAGGTTTTGAATTTTCTTTCTTCTCCTTTCAAAAGCTTTTTTAGAGTTGTTAATTCTGAAATACAAGATGTTTTTCAAAGATTGGAACAATTTTCATTGCAAAAAGATATCCTTGGATTGAAACAAGGTGTTTGTGGCAAAGTTTGGCATGGAATACCTACTAGTTCTGTTGTTGATGAATCTGCTATTTATGGTAGAGATGATGATAGAAAGAAACTCAAAGAGTTTTTACTATCAAAAGATGGTGGAAGGAACATAGGAGTGATATCTATTGTTGGTATGGGAGGGATTGGAAAAACAACACTAGCTAAACTACTTTACAATGATCTTGAGGTAGGAGAGAATTTTGACCTAAAAGCTTGGGCATATATATCAAAGGATTTTGATGTTTGTAGGGTGACAAAAATTCTTCTTGAATGTGTCAGTTCAAAGCCGGTTGTCACGGATAACTTGAATAATCTACAAGTGGAGTTACAGCAAAGTTTGAGAAAAAAAAGATATTTGCTTGTTCTGGATGATGTCTGGGATGGAAGTTATGATGAATGGAACAAACTGAAGGCTGTTTTTGAAGCCGGGGAAGTGGGAAGTAAGATCGTCATCACAACACGGGATGAAAGTGTTGCATTAGCAATGCAAACTCATCTTCCTGTCCACTATTTGAGATCTCTTCGTAGTGAAGATTGTTGGTCTTTACTTGCGCATCACGCATTTGGACCGAATAACTGCAAGGAACAATCGAAACTTGAAGTAATTGGCAAAGAAATTGCAAAAAGATGTGGTGGCTTGCCGTTAGCTGCAGAAGCCGTTGGGGGTCTTCTCCGCACCAAATTATCAGAAAAGAACTGGAATAAGGTATTAAAAAGTAACATCTGGGATTTGCCAAATATCAAAGTGCTACCGGCTCTTCTATTGAGCTATCACTATCTTCCTGCTCCTTTGAAGCGATGTTTTGCTTATTGTTCAATTTTTCCAAAGAACTCCGGTTTAGATAAGAAGATGGTGGTTCTGCTATGGATGGCAGAAGACTTGGTACATCAGTATAAAGGTGAAAAAACTATAGAAGAGGTAGGAGAAGAATACTTTGATGAACTTGTATCACGGTCGCTAATACGTAGACAGATGGTCAATGCGAAAGAAAGCTTCATGATGCATGACCTTATCAATGAATTAGCAACAACTGTTTCATCTGCATTTTGTATCAGGCTTGAGGATCCAAAGCCATGTGAAAGTCTTGAAAGAGCTCGTCATTTGTCATACATTCGAGGGAATTATGACTGCTTCAATAAATTCAATATGTTTCATGAATCAAAGTGTCTTCGAACCTTACTAGCCTTACCGTTAAGACATTGGTGGTCATCAAAATATCCTAATCTGAGAAGCCATTATCTATCAAGCAAGTTACTATTTGATTTGTTACCTGCAATGAAACGGTTGAGGGTGTTATCTTTGTCACACTATAACAATATCACTGAGTTGCCTAACTCTTTCGTAAATTTAATACATCTGCGGTATTTAGATCTCTCCAACACTAAAATAGAAAAATTGCCAGATGTAATATGCAAGCTCTACAATCTTCAAACCTTATTGTTGTCGAAATGTAGCTCTCTTACTGAATTACCCGAGGACATTGGAAATTTGGTTAATCTACGTCACCTCGATTTAAGTGACACTAAGTTGAAGGTGATGCCTATACAAATAGCCAAACTGCAAAATCTTCAAACACTGTCTTCATTTGTTGTCAGCAGACAATCAAACGGGTTGAAGATTGGGGAGCTGAGAAAATTTCCACATCTACAAGGGAAATTGTCAATCTCAAAGTTACAAAATGTTACTGACCTCTCTGATGCTGTTCATGCCAACTTGGAGAAGAAAGAAGAAATTGATGAGTTGACATTAGAATGGGATCGTGATACAACAGAAGACTCGCAAATGGAAAGACTTGTACTTGAACAGTTGCAGCCCTCAACAAATTTGAAGAAACTCACAATCCAATTCTTTGGTGGAACCAGCTTTCCGAATTGGTTAGGAGATTCCTCATTTCGCAACATGATGTATTTGCGCATCAGTGGTTGTGATCATTGTTGGTCACTTCCTCCCCTAGGAGAGTTGCTTAGTCTCAAAGAACTCTTCATTTCTGGACTAATATCAGTGAAAATGGTTGGTACTGAGTTTTACGGAAGCATTAGTTCCCTTTCCTTTCAACCATTTCCCTCCTTGGAAATTTTGTGTTTCGAGGATATGCCAGAATGGAAGGAATGGAACATGATTGGAGGTACCACTATTGAGTTTCCTAGTCTAAGGCGTTTGTTTCTATGTGATTGTCCGAAACTCAAAGGAAACATACCACAGAACCTTCCTTCTTTAGTTGAACTCGAGTTGTCAAAATGTCCTCTGCTCAGGTCACAAGAGGTTGATAGCAGCATCAGCAGCAGCATTCGAAGGCCATCACATCCCGAGTGGATGATGATTGAACTCAATTCTCTCAAACAGTTGACTATCTCAAGCATTGTTTCTCTGAGTTCCTTCCCATTAGAACTTCTCCCTAGAACATTAAAATCTCTCACTTTCCTTTCTTGTGAGAATCTAGAATTCTTACCTCACGAATCCTCACCTATTGACACTTCACTTGAGAAATTGCAAATATTCAACAGCTGTAATTCAATGACATCCTTTTATCTAGGCTGTTTCCCTGTCCTCAAAAGTCTCTTCATCTTAGGCTGTAAAAATCTAAAATCTATTTCTGTTGCAGAAGATGATGCATCACATAGTCATTCCTTTCTTCAAAGTTTATCCATATATGCCTGTCCTAATCTTGAATCATTTCCATTTCATGGACTCACTACTCCTAACCTCAATAGTTTCATGGTGTCAAGTTGTCCTAAGCTTAAGTCACTACCTGAACCTATTCACAGTCTATCCAGCCTTTATCAATTGATTGTGTATGGACTTCCAAAACTGCAGACCTTTGCACAGGAGAGTTTACCAAGCAATTTAAGGATACTTGAAGTGTCGAATTGTGGGAGTTTGTCTACTTCAGCTATCACTAAGTGGGGTTTGAAGTACCTTACTTGTCTTGCTGAGTTGCGAATTCGAGGGAAGTGGCTTCAGCATCTCACGTCTCTTGAAAACCTTGAGATTTCAGATTGTCGCCGGCTTGAATCCTTACCGGAAGAGGGACTGCCTTCCTCTCTTTCGGTACTGACTATCAAGCGATGCCTTTTACTGCAAGCAAACTGTCAGAGCAATGGAGGCAAAGAGTGGCCTAAGATTTCACATATTCCATGCATAATTATTGATAAAAAAGTGATAATATGA 3639 0.3864 MAFVGEAFLSASLEVLLDRIIPDELLYFSRNKELDTSLLKKLKITLLSLQAVMNDAEEKQITNPAVKQWLDELRDALYDADDLLDEINTESLRCKLEAESQIQQPFSDQVLNFLSSPFKSFFRVVNSEIQDVFQRLEQFSLQKDILGLKQGVCGKVWHGIPTSSVVDESAIYGRDDDRKKLKEFLLSKDGGRNIGVISIVGMGGIGKTTLAKLLYNDLEVGENFDLKAWAYISKDFDVCRVTKILLECVSSKPVVTDNLNNLQVELQQSLRKKRYLLVLDDVWDGSYDEWNKLKAVFEAGEVGSKIVITTRDESVALAMQTHLPVHYLRSLRSEDCWSLLAHHAFGPNNCKEQSKLEVIGKEIAKRCGGLPLAAEAVGGLLRTKLSEKNWNKVLKSNIWDLPNIKVLPALLLSYHYLPAPLKRCFAYCSIFPKNSGLDKKMVVLLWMAEDLVHQYKGEKTIEEVGEEYFDELVSRSLIRRQMVNAKESFMMHDLINELATTVSSAFCIRLEDPKPCESLERARHLSYIRGNYDCFNKFNMFHESKCLRTLLALPLRHWWSSKYPNLRSHYLSSKLLFDLLPAMKRLRVLSLSHYNNITELPNSFVNLIHLRYLDLSNTKIEKLPDVICKLYNLQTLLLSKCSSLTELPEDIGNLVNLRHLDLSDTKLKVMPIQIAKLQNLQTLSSFVVSRQSNGLKIGELRKFPHLQGKLSISKLQNVTDLSDAVHANLEKKEEIDELTLEWDRDTTEDSQMERLVLEQLQPSTNLKKLTIQFFGGTSFPNWLGDSSFRNMMYLRISGCDHCWSLPPLGELLSLKELFISGLISVKMVGTEFYGSISSLSFQPFPSLEILCFEDMPEWKEWNMIGGTTIEFPSLRRLFLCDCPKLKGNIPQNLPSLVELELSKCPLLRSQEVDSSISSSIRRPSHPEWMMIELNSLKQLTISSIVSLSSFPLELLPRTLKSLTFLSCENLEFLPHESSPIDTSLEKLQIFNSCNSMTSFYLGCFPVLKSLFILGCKNLKSISVAEDDASHSHSFLQSLSIYACPNLESFPFHGLTTPNLNSFMVSSCPKLKSLPEPIHSLSSLYQLIVYGLPKLQTFAQESLPSNLRILEVSNCGSLSTSAITKWGLKYLTCLAELRIRGKWLQHLTSLENLEISDCRRLESLPEEGLPSSLSVLTIKRCLLLQANCQSNGGKEWPKISHIPCIIIDKKVII* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0348 1212 Pfam NB-ARC domain 176 395 IPR002182 GO:0043531
Mtr3g0348 1212 SMART LRR_typ_2 654 677 IPR003591 -
Mtr3g0348 1212 SMART LRR_typ_2 607 630 IPR003591 -
Mtr3g0348 1212 SMART LRR_typ_2 583 606 IPR003591 -
Mtr3g0348 1212 SUPERFAMILY L domain-like 931 1190 - -
Mtr3g0348 1212 Gene3D Ribonuclease Inhibitor 515 915 IPR032675 -
Mtr3g0348 1212 Gene3D Ribonuclease Inhibitor 1103 1193 IPR032675 -
Mtr3g0348 1212 Gene3D Ribonuclease Inhibitor 916 1102 IPR032675 -
Mtr3g0348 1212 PRINTS Disease resistance protein signature 196 211 - -
Mtr3g0348 1212 PRINTS Disease resistance protein signature 269 283 - -
Mtr3g0348 1212 PRINTS Disease resistance protein signature 367 381 - -
Mtr3g0348 1212 PRINTS Disease resistance protein signature 891 907 - -
Mtr3g0348 1212 Gene3D - 413 501 IPR036388 -
Mtr3g0348 1212 Coils Coil 39 59 - -
Mtr3g0348 1212 Gene3D - 157 324 IPR027417 -
Mtr3g0348 1212 ProSiteProfiles Leucine-rich repeat profile. 609 630 IPR001611 GO:0005515
Mtr3g0348 1212 Gene3D - 32 133 - -
Mtr3g0348 1212 Coils Coil 70 90 - -
Mtr3g0348 1212 Pfam Rx N-terminal domain 8 103 IPR041118 -
Mtr3g0348 1212 PANTHER - 49 913 - -
Mtr3g0348 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 428 IPR027417 -
Mtr3g0348 1212 SUPERFAMILY L domain-like 491 908 - -
Mtr3g0348 1212 Pfam Leucine Rich repeats (2 copies) 584 625 IPR025875 -
Mtr3g0348 1212 Gene3D - 330 412 IPR042197 -
Mtr3g0348 1212 PANTHER DISEASE RESISTANCE PROTEIN RP 49 913 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0348 Mtr-Chr3 3985730 3990500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0348 597 693 WRKY Transcription Factor Family AT4G12020 42.857 1.59e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0348 - - ccaj:109806283 1511.12