Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0347 ATGAGTAGCGTTTCTGGAAACATGAATGGGGCAACAATTCCAATAGTTGAAGGTGTAGAGAAATTGGGGAACAATATTGATGTGAATATTGTGCAAAATGGAGAAGAGAGTGTTGTTGATTATATACCACACTTGGAAATGGAGTTTGAATCTGAGGCAGCGGCATATGAATTTTATAATAAGTATAGTAGGAGAATTGGGTTCGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTGACTTCAAGAAGATTCACGTGCTTTAAAGAGGGTAAACGGGGTGTTGACAAACGAGACCATTTGACAAAAGAGGGGAGAGTGGAAACCAGAACGGGATGTGATGCACGTATGGTTATTTCACTTGATCGAAAGATTGGTAAGTACAAGGTTGTTGACTTTGTAGCTCAACATAATCATCTTCTTGAACCGCCAGGGTATTTTCATACTCCTCGCTCCCATCGACAAATATCTGAGTCACGAGCATGTCAAGTTGTAGCGGCTGATGAATCTAGATTAAAACGAAAAGATTTTCAGGAATATGTGTTCAAGCAAGATGGTGGGATAGATGATGTTGGTTATCTTCAAACTAGAAGGATGCGGTCACTAATGTATGGTGAAGTGGGTGCGTTGTTGATGCATTTCAAACGGCAAAGTGAAAATCCTTCATTCTATTATGACTTCCAAATGGATGTTGAAGAGAAAATAACAAATGTATTTTGGGCGGATGCACAAATGATAAACGATTATGGATGCTCCGGTGATGTCATCACTTTTGACACGACATACATGACAAATAAGGATTATCGCCCGTTGGGAGTATTTGTTGGACTAAATAATCACAAGCAGATGGTTGTTTTTGGTGCAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAGAAAAGCCTAAAACCCTTCTAACTGATCAAGATGAAGCAATGGCTAAGGCTATTTCTGTAGTTATGCCGCAAACATTTCATGGGTTGTGCACTTGGCGTATAAGAGAAAATGCACAGACACATGTGAACCATCTTTATCAAAAGAGTTCAAAATTCTGCTCAGATTTTGAAGCATGCATTGATCTACATGAAGAGGAAGGTGAATTTTTGAACTCATGGAATGTTTTACTTGTTGAACATAATGTTTCTGAAGATTCATGGCTCCGTATGATTTTTCAATTAAAGGAAAAATGGGCATGGGTGTATGTTCGAAAACATTTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGTTTTAATGCTGAGTTGAAAAATTATTTGAAGTCAGATTTAAATTTAGTTCAATTTTTCTCACACTTTGGAAGGATTGTCCATGGAATACGGAACAATGAATCAGAAGCCGATTATGAGTCAAGACACAAGTTGCCTAAATTGAAAATGAAAAGGGCTCCTATGCTTGTACAAGCCGGAAATATTTACACTCCAAAAACCTTTGAGGAATTTCAAGAAGAATATGAGGAATATCTAGGCACTTGCGTAAAGAATTTGAAAGAAGGGTTGTATGTTGTTACAAATTATGATAATAATAAGGAGCGGATGGTAATAGGGAATCTTATGGATCAAAAGGTTGCTTGTGATTGTCGTAAATTTGAGACACACGGCATCTTATGCAGTCATGCTTTGAAAGTATTAGATGTTATGAATATTAAGCTGATTCCTCAACACTATATACTGAAGCGATGGACAAGAGATGCAAGATTGGGAAGTAATCATGATTTGAAAGGGCAGCATATTGAACTGGATACAAAAGCTCATTTCATGAGGCGATACAATGATTTATGTCCTCAAATGATTAAATTGATCAACAAAGCATCAAAATCTCATGAAACTTACACATTTTTGTCCAAAGTTTTTGAAGAGTCTGATAAAATAATTGATGATATGTTAGCTAAAAAGTTTGTGGGTGTAGAATCACTTGAGATGTCTCATGTATCCATACCCGTTGCCATGGAAAAAATTGACAACAATGTCCACACTCTGGATGTCGGTGGGGAGCAGGGTATAAAGAAAGCTAGATTGCTCAAATAA 2100 0.369 MSSVSGNMNGATIPIVEGVEKLGNNIDVNIVQNGEESVVDYIPHLEMEFESEAAAYEFYNKYSRRIGFGIRREYGNKSKKDGILTSRRFTCFKEGKRGVDKRDHLTKEGRVETRTGCDARMVISLDRKIGKYKVVDFVAQHNHLLEPPGYFHTPRSHRQISESRACQVVAADESRLKRKDFQEYVFKQDGGIDDVGYLQTRRMRSLMYGEVGALLMHFKRQSENPSFYYDFQMDVEEKITNVFWADAQMINDYGCSGDVITFDTTYMTNKDYRPLGVFVGLNNHKQMVVFGATLLYDETIPSFQWLFETFLKAMGGEKPKTLLTDQDEAMAKAISVVMPQTFHGLCTWRIRENAQTHVNHLYQKSSKFCSDFEACIDLHEEEGEFLNSWNVLLVEHNVSEDSWLRMIFQLKEKWAWVYVRKHFTAGMRSTQLSESFNAELKNYLKSDLNLVQFFSHFGRIVHGIRNNESEADYESRHKLPKLKMKRAPMLVQAGNIYTPKTFEEFQEEYEEYLGTCVKNLKEGLYVVTNYDNNKERMVIGNLMDQKVACDCRKFETHGILCSHALKVLDVMNIKLIPQHYILKRWTRDARLGSNHDLKGQHIELDTKAHFMRRYNDLCPQMIKLINKASKSHETYTFLSKVFEESDKIIDDMLAKKFVGVESLEMSHVSIPVAMEKIDNNVHTLDVGGEQGIKKARLLK* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0347 699 Pfam SWIM zinc finger 548 569 IPR007527 GO:0008270
Mtr3g0347 699 ProSiteProfiles Zinc finger SWIM-type profile. 525 572 IPR007527 GO:0008270
Mtr3g0347 699 PANTHER OS03G0181600 PROTEIN 24 648 - -
Mtr3g0347 699 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 648 IPR031052 GO:0006355
Mtr3g0347 699 Pfam FAR1 DNA-binding domain 57 146 IPR004330 -
Mtr3g0347 699 SMART 26again6 547 574 IPR006564 GO:0008270
Mtr3g0347 699 Pfam MULE transposase domain 259 353 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0347 Mtr-Chr3 3979681 3985040 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g0347 MULE 7.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0347 - K17604 cam:101500125 1063.52