Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0339 ATGCCTTCCAAAACCAACCAAAGCGAAAAAGAAGAAAAATCACCATACAAAGTTGAACAAGAGGAAGACGATGACGAAGAAGAAGTAGAAGAAGAGCAAAACTGGGACGATTGGGAAGAAAACGATGGAGATTCAGATTCCGAATTCATCTGTCTCTTCTGTGATTCCAATTTCAGTTCCTGCACTTCCTTGTTCCAACATTGTGCTTCTGTTCACCACTTCGATTTTCATGTTGTTAGAGATTCTCTCAACTTGGATTTCTATGCTTCCTTCAAGCTTATTAATTATATTCGTTCCAAGGTGGCAGAGAGCAGATGTTGGAGTTGTGGTTTAGCTTGTCAGTCCAAACATGATTTGCAGAATCACTTGCATGATGTAACTGACTTCAATGGGATTAAGCCTTTGTGGGATGATGATAAATATCTAAAACCTTTTATGCAAGATGATTCATTGTTGTACAACTTTGGTGAATTTGAAGAAGGTGAAGATGAAGAAACTTCAACCATGGATGAAGATCTTGTGAAGGATTTGAAAGACGCAATTTACGGTGATAATCAAGATGCCGTGAAAAAATTGGTAGTTAATGACGATGTTTATGTTTCAGACGATCATTCAAGCTTGCCTAGTTCCTCAGATAAGGAACTTGTTAACGGGAAGGACTCAAGAGGAAGTGTTTCATCGATTGATAAGAATCCAGAAGAAGGGTCTTTGATCAGTAATCCTCAGAATCACATTGCAACACATATTAGGAAAGTTAATGAAAGTTATTTTGGGTCTTACAGTTCATTTGGCATCCATCGAGAAATGTTAAGTGATAAGGCTAGAATGGATGCTTATGGGCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGTGCTGTAGTTATGGACGTCGGCTGTGGAACTGGCATCCTCAGCCTTTTTTCAGCTCAAGCAGGGGCTTCAAGGGTCATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCCAAAAATAACGGTCTCTTGCTGAATAAAAGCGAAACTAGAGTCAATGGCAACCAGAAAGGAGTCGTAGAAGTGGTTCATGGCATGGTTGAAGAAATTGACAAAATTGTTGAACTTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCTTACTATATGAATCCATGCTTGGCTCAGTGCTTTATGCACGGGACCGGTATTTGAAGCCTGGGGGTGCCATTCTTCCCGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAATGTGTGTGATTTTGACATGTCTTGCATTGGGGAGGAGCTTGTCATAGATGCTGCCCGGTATCCTATAGTTGATGTCATAGACCATCAAGATTTAGTTACCAGTTCCACTATTCTTCAGACGTTTGACTTGGCTACCATGAAGCACCATGAAGTGGATTTCACCGCAACAGCTTCTTTGGAACCAAAATTGAGTGCTTCAGAAAATGAAAATTCTAAAACATGTTGCTGGTGTTATGGAGTTGTCCTATGGTTTGATACTGGATTTACAACTAGATTCTGCCGGGATACACCAGCTGTGCTGTCAACATCCCCTTACACTCCGAAAACACATTGGTCACAGACAATCTTAACTTTCCGGGAACCCATTGCCATTGGATTTGGGGAAGAAAATGGGACAAAACCGGAAACAATTGGCACTGAAGGCTACCCTGCTGTGAAGATTGATTTGCGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGACATTTCCATGGAAGCTGCTGGTGTAAGTCCTGATGGTCGGAGACGCACTTGGCCTGCTCAACTTTTTTCTCTACAGTAG 1875 0.4171 MPSKTNQSEKEEKSPYKVEQEEDDDEEEVEEEQNWDDWEENDGDSDSEFICLFCDSNFSSCTSLFQHCASVHHFDFHVVRDSLNLDFYASFKLINYIRSKVAESRCWSCGLACQSKHDLQNHLHDVTDFNGIKPLWDDDKYLKPFMQDDSLLYNFGEFEEGEDEETSTMDEDLVKDLKDAIYGDNQDAVKKLVVNDDVYVSDDHSSLPSSSDKELVNGKDSRGSVSSIDKNPEEGSLISNPQNHIATHIRKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAVEASAKMAAVASQVAKNNGLLLNKSETRVNGNQKGVVEVVHGMVEEIDKIVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRYLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCDFDMSCIGEELVIDAARYPIVDVIDHQDLVTSSTILQTFDLATMKHHEVDFTATASLEPKLSASENENSKTCCWCYGVVLWFDTGFTTRFCRDTPAVLSTSPYTPKTHWSQTILTFREPIAIGFGEENGTKPETIGTEGYPAVKIDLRVSIVRSTEHRSIDISMEAAGVSPDGRRRTWPAQLFSLQ* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0339 624 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 259 564 IPR029063 -
Mtr3g0339 624 MobiDBLite consensus disorder prediction 1 42 - -
Mtr3g0339 624 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 20 622 - -
Mtr3g0339 624 Gene3D Vaccinia Virus protein VP39 245 414 IPR029063 -
Mtr3g0339 624 Pfam Methyltransferase domain 295 410 IPR041698 -
Mtr3g0339 624 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 253 576 IPR025799 GO:0016274|GO:0018216
Mtr3g0339 624 MobiDBLite consensus disorder prediction 202 242 - -
Mtr3g0339 624 Gene3D - 416 616 - -
Mtr3g0339 624 CDD AdoMet_MTases 295 413 - -
Mtr3g0339 624 SUPERFAMILY beta-beta-alpha zinc fingers 30 166 IPR036236 -
Mtr3g0339 624 MobiDBLite consensus disorder prediction 18 42 - -
Mtr3g0339 624 MobiDBLite consensus disorder prediction 1 17 - -
Mtr3g0339 624 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 20 622 IPR025799 GO:0016274|GO:0018216
Mtr3g0339 624 Pfam C2H2 type zinc-finger (2 copies) 51 125 IPR041661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0339 Mtr-Chr3 3917454 3922544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0339 23 623 C2H2 Transcription Factor Family AT3G12270 55.626 0.0 644