Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0336 ATGAATCAAAGTGTCGAGAACTGCACCATGAAACAAAGAAGTTCCTTTGATTACAAGATGAAAAGAAAAGTTGACGATGAGATTAGCTTTACTCCTGGTGAGCGTGAAGTTGCTCGTATTCTTCTTTCAATGCAAAAAATTGAAGACGAGAAGAGAAGAACATATAACAACAATGCTCATCCAGCGCCACAAATCAATATACCGACGATTCCTGGTGTAACAAACAATGATATTCTTTTTTGTTGCAAGCCTTTTGTGAAGAAACTATACCCTACTGATTTGGAACCGGGTCAGAGTAGATTACTATTGAACAAGAATCATGTGAAAACGTATTTCTTGCCCTTGTTGAAAAAAGGAGAAGAAGATGTTCGAGAAGGAATAGACGTCGTTGTTTATGACATGCAAGGCAACACATTCAACATGATATTTAAGTATTGGAGTGAAAAAGTTTATGTCCTCAGCGGTGGAAGGTGGGTGAATTTCTCCCAAACGCATCAATTGAAAGCGATTGAAGATCATGTTACGGTGTGGATGTTTCGCCATTCACAAACCAATCAGTTGTGTTTTGCTCTTAGTGTGAGAAAAGTGCAAACTTAA 597 0.3802 MNQSVENCTMKQRSSFDYKMKRKVDDEISFTPGEREVARILLSMQKIEDEKRRTYNNNAHPAPQINIPTIPGVTNNDILFCCKPFVKKLYPTDLEPGQSRLLLNKNHVKTYFLPLLKKGEEDVREGIDVVVYDMQGNTFNMIFKYWSEKVYVLSGGRWVNFSQTHQLKAIEDHVTVWMFRHSQTNQLCFALSVRKVQT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0336 198 PANTHER B3 DOMAIN PLANT PROTEIN 5 197 - -
Mtr3g0336 198 Gene3D - 85 198 IPR015300 -
Mtr3g0336 198 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 5 197 IPR005508 GO:0003677
Mtr3g0336 198 SUPERFAMILY DNA-binding pseudobarrel domain 85 191 IPR015300 -
Mtr3g0336 198 CDD B3_DNA 85 195 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0336 Mtr-Chr3 3898139 3898735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0336 83 191 B3 DNA Binding Superfamily AT4G03170 42.727 1.97e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0336 - - mtr:MTR_3g013810 403.675