Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0327 ATGACTTTGGAGATCATTAAAGTTGCTCTAAAGACAAAGAAACTCAATTACTATACGTTTGATGTGGACTATGTCAGAGCTGCTTCCATTGCAAGGAAGATCTACTTGAGGGGTGGACTCGGTGTTGGTGCATTCCAGAGGATTTATGGTGGAAGCCAGAGGAATGGCAGTCGCCCACCTCATTTCTGCAAGAGCAGTGGTTCCATTGCTCGCCACATTCTTCAACAGTTTAGCAGTTGTTCATGCTATTATGCATCCGTGTGTTTTATTTATATTGTGATTAGGATTTGCTTAGAAATAGTTTCTGCATCGTCCCTTTGTATCATGTTTTTAACATTGGTTTTTTTTGTATCACAGTGGCAGGAAGATCACTTCCAGCGGAAGGAGGGATTTGGACCAAGTTGCTGGACGTATTGTTATTGCTCCTTGATCTGTAAACTGCTTCTAGGTTGA 453 0.4172 MTLEIIKVALKTKKLNYYTFDVDYVRAASIARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQFSSCSCYYASVCFIYIVIRICLEIVSASSLCIMFLTLVFFVSQWQEDHFQRKEGFGPSCWTYCYCSLICKLLLG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0327 150 Gene3D - 2 84 IPR036388 -
Mtr3g0327 150 SUPERFAMILY "Winged helix" DNA-binding domain 13 79 IPR036390 -
Mtr3g0327 150 PANTHER 40S RIBOSOMAL PROTEIN S19-3 6 79 - -
Mtr3g0327 150 Pfam Ribosomal protein S19e 12 80 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mtr3g0327 150 PANTHER 40S RIBOSOMAL PROTEIN S19 6 79 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mtr3g0327 150 SMART Ribosomal_S19e_2 2 79 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0327 Mtr-Chr3 3779050 3779873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0327 4 81 Cytoplasmic Ribosomal Protein Gene Family AT5G15520 70.513 1.04e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0327 K02966 - gmx:100805469 114.39