Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0318 ATGGCATCAATGTCAGCATCTGGTTCATGGAGTGCTAAGGACAATAAAGCATTTGAAAGGGCACTAGCTGTTTTTGATAAAGACACACCTGACCGTTGGTCCAATGTTGCTCAAGCTGTTGGTGGTGGGAAGACTCCTGAGGATGTTAAGAGACACTATGAACACCTCCTAAGGGATGTTAGGCACATTGAATCAGGTCAAGTTGCATTCCCAAATTACAAGAACATTGGAGGCTATGATGAGGAAAAAAGGTTGAGAAACCTAAAGCTCCAGTAA 276 0.4312 MASMSASGSWSAKDNKAFERALAVFDKDTPDRWSNVAQAVGGGKTPEDVKRHYEHLLRDVRHIESGQVAFPNYKNIGGYDEEKRLRNLKLQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0318 91 Gene3D - 2 70 - -
Mtr3g0318 91 CDD SANT 9 57 IPR001005 -
Mtr3g0318 91 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Mtr3g0318 91 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mtr3g0318 91 SMART sant 6 59 IPR001005 -
Mtr3g0318 91 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Mtr3g0318 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 91 IPR044636 GO:0003700
Mtr3g0318 91 ProSiteProfiles SANT domain profile. 5 61 IPR017884 -
Mtr3g0318 91 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0318 Mtr-Chr3 3678253 3679959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g0318 Myb_DNA-binding 9.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0318 - - gmx:100804396 150.984