Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0306 ATGCTACATGGATGGAATTATGATGTGTTCCTTAGTTTCAGAGGTGAAGATACAAGAACAAGTTTCACAGGCTCTCTCTATCATGGTTTGCACCAAAAGGGCATCAATGTTTTCATAGATGATGAGGAGCTTAGGAGAGGAGAACAAATATCTCCATCTCTTCTTACAGCCATTGAAGAATCAAGAATTTCTATCATTGTGTTTTCTCAGAACTATGCAAATTCAACTTGGTGTCTTGATGAGCTTGCTAAGATTCTTGAATGTTGGAAAACAAAAGGACAGTTAGTTTTTCCAGTTTTTTACTATGTTGATCCTTCTTCTGTAAGGCATCAAAGAGGAAGTTTTGGAACAGCAATGGCTAAACATGAAGTCACATTCAAGGATGATGTTGAAAGGTTGAAGAAGTGGAAAAAAGCCTTGTTTGATGCAGCCAATTTTTCAGGTTGGAGCTTAGAAAATGGGTATGAGTATGAGCTTATAATAAAAATCATTGAGGAGGTATCTGGCAAATTAAATAACACCCTTTTGCATATTGCTGAGCACCCGGTTGGACTAGAAACTCGAATATCGGAAGTAAAATCACTTTTGCAAATTGAAAAGCCTGGTGAAGAAGCTTCTTTCATTGGAATCCATGGACTTGGAGGCATAGGTAAAACAACAATTGCAAGAGCATTATACAACTCAATTGCTAATCAATTTGAAGTCACAAGTTTCCTTACTGATATAAGAGAAAGTTCAACTCAAAGACAAGGCTTAGTTCAACTTCAAGAAACGCTTCTTTATGAAACAGTTGGTGAAAAGAATATTAAGCTAGGAAATGTTTATAAAGGAATCCCTATCATAAAGAAGAGATTATGTTGCAAAAAAGTACTTTTGATTCTTGATGATGTTGACAAATTGGAACAGATTCAAGCATTAGCCGGAGGACGTGATTGGTTCGGTTTTGGAAGTAAAATAATCATAACAACAAGAGATAAACAATTATTAGCTTCTCATGAAGTTGATAAAACATATGAAGTTAAGAAACTTAACCATGAAGAAGCTTTTGAACTCTTTACATGGAATGCATTCAAAAGAAAAGCAACTGATAAGGGCTATTTCGAGATTTGCAACAATGTTGTTCTCTATGCTGAAGGACTTCCATTGGCTTTGAGAGTAATGGGATCTAATCTGTTTGGTAAAACTGTTGAGGAATGGAAATCTGCATTGGCAAAATATGAAAAAATTCCTAATAAAGAGGTTCAAAATGTACTTAGAGTAACTTATGATAATTTAGAAGAGAATGAAAAGGAAATATTCTTGGATATAGCATGTTTCTTCAAGGGTGAGACAGTTGAATATGTTGAAAAGACACTTCAAGCTTGTGGTTTCTTTCCGAAATTCGGGATCAGTGTACTTACTGATAGGTCTCTTGTAAGTATTGATGAATATAACCGATTGAGAATGCATGATTTGATACAAGACATGGGTAGGGAAGTTGTTAGAGAAGTTTCGCCGTTAGAGCCTGGAAAACGGAGTAGATTATGGAATCATGAAGATGTTATTGAAGTACTAACCGAAAATTCGGGGACTTATAGAGTTCAAGGCATGATGGTAGATCTTCCTGATCAATATATGGTACACTTGAAAGATGATTCATTCAAAAAGATGAAGAATCTCAAAATTCTTATAGTTAGAAATGGGCATTTTTATGGCAGCCCTCAACATCTTCCAAACAATTTAAGGTTGCTTGATTGGATGGAGTATCCTTCATCAACTTTACCATCTACTTTTCATCCAAAAAAACTTGTTGTACTCAACTTGTCGCGTAGTCGTTTCACAATGCAAGAGCCATTCAAGCATTTGGATTCATTGACTTCTATGGATTTGAGTCACTGTGAATTCTTAACAAAGCTACCTGACGTTTCTGGCGTGCCTAATTTAACAGAACTAAATCTTGACTATTGTACAAATCTAGAACAAGTTCATGATTCAGTTGGATTTCTTGAGAAACTTATTGAGTTGAGGGCTTATGGATGCACTAAGCTTAAGGATTTTCCACATGCAATCAAATTGTCATCATTGAAAAGTCTAATTCTTAATTGGTGCTCAAGTCTTCAAACATTCCCTACAATTTTAGGCAAAATGGATAATCTCATATCTATTTCTATTGAAGGCACTGGTATTGAAGAATTGCCTCCGTCCATTGGAAATCTTGTTGCTCTTCAAGAATTAAGCATGACATCTTGCTTGAGTCTAAAGGAACTTCCTGAAAACATTGATATGTTGCATAATCTTAGAAACCTTGATATCGAAGGTTGTCCACAACTTAGAAGCTTTTTGACAAAATTGAGAGAATTAGGACAATCAACTCTTACCTTTGGTAATGTTCAATCATTGAATCTGGAAAATTGTGGTCTTATAGATGAAGATCTTCCCATAATTTTCAACTGTTTCCCAAATTTAGCATCATTAGTCCTTTCAGGAAATAATTTTGTAACTCTGCCAAGGTGCATTCAAGAATATCATTCCTTGGAAATGCTTCACTTAGACAACTGCAAACAGCTCCAAGAAGTTATAAGCCTTCCTCCCAATTTACAATACATCAATGCAAGAAACTGCATATCATTGACTGCAGAGTCATCAAACTTATTACTAAGCCAGGAAACTTTTGAGGCATGTGAATTACAAGTTCTGGTTCCTGGAACAAGTATTCCAGAATGGTTTGACCACATCACCAAAGGAGAATATATGACCTTTTGGGTTAGAAAAAAATTTCCTGCAATTATTTTATGCTTTGCTCTTGCAATAGAGAGTGAAATGAAGAAGAGTTTCAACTGCGAAATCCGATTCTATATAAACAGTGATGAAGTTTATGAATTGGAAATACCAAGATGCTTTTCAGAAATGGTGACAGATCATGTATGGCTTTATGATTTGAGGACTCATCCATCCATCAGATTGAATGATCTTGAATCATATCTGGTTGATGATTGGAATCAGATTGAGATTTCATGTGACAAAATAATTGGACCATCAAATGTAACTATAAGCTGGTGTGGAGTTCATATATGTAGGGAAGAAGATAACATGGAGGATATTCTATTTAAAGATCCTGATCTTGATTTAGATTCAAGCAGAGAAACTGAGAAGATTGATTCTGATTTGGATAAAAACAATGATGCAAGAATAAAGTCAATTGGAGATTTCAAAAATAGCAAAAAAGATAATGATTTCTACTGTTTCAAGAACTTGGAAGATTATAATAATGCTGCAAGTCACACAGAGATGGATCATAATCAAGATAAACTTTTATTGCATCCAAAAACATTGGATAGTGTTACTAATGATTCAATGCCTTTAGTATGTTTTGGAGGCAAGAATGTTGTCGAAGGATCAAACATGATAGCTTCTGATCATCAAGCAAAAGCTCGGGAAAAATCCAAAGTCACAAGTTTTATACAAACACCAATTGCTAATCTGGATGATGCAGACATGGAAGCATTTTATGCTATTCTTGATGCTGAGACCTCAATTCTTTCACTTTCCAATCACAACGACATAATTTCTGAATCATCCAACAGAATAATTCCAAGTGAAGAAACCAAGAAAGCTTTGAAGACACTTCAAGATTTTCTCACCAAAGACTTTTCTGTTCTTTTAAGGCCTAATGAGTACAATACCATGAAATCTACCTTAGATTACCTCACAAATGTACCAACAGAAGATGGAATATCTGTTGATATAAGATCATTGGTTAAAGAAGTTTCAAGACAGTTCACTTGTTGGAGTCATGATTACACAAATGAAGGCAAGAAAATAGAGTATACAAAAGCCAAATTGTTGAAAAGTGATGAGCTAGAAGAGGGTCTTGAAGCTAACAAAACTCTTTTTAGAGAAGTGAAGTATTTGGAAAATGAATTGTGCAATGAGTTGGAATATTTGGAGGACAGAAAAAAGGAGTTAGAAGAACTAATAAATGGTGTTAGGGCTAATATAGCTGCTTCACAAGAAGCCAAGAACATGGTTGTTCATACAAAGAGAGAAATCTTTGAGAATGCAAAGATTCTAAAAGTTCAAAGAGATGAGTTAAGGGGACAAGTACATTGTTTGAGAGATGAGCATGAATTGGCTAAGAAAATCCAGGCAAATATTAGAGATGAATGGGCAAAGCTAGGTGAAAAATTTAGCAAGGCTGCCAACTAA 4185 0.3496 MLHGWNYDVFLSFRGEDTRTSFTGSLYHGLHQKGINVFIDDEELRRGEQISPSLLTAIEESRISIIVFSQNYANSTWCLDELAKILECWKTKGQLVFPVFYYVDPSSVRHQRGSFGTAMAKHEVTFKDDVERLKKWKKALFDAANFSGWSLENGYEYELIIKIIEEVSGKLNNTLLHIAEHPVGLETRISEVKSLLQIEKPGEEASFIGIHGLGGIGKTTIARALYNSIANQFEVTSFLTDIRESSTQRQGLVQLQETLLYETVGEKNIKLGNVYKGIPIIKKRLCCKKVLLILDDVDKLEQIQALAGGRDWFGFGSKIIITTRDKQLLASHEVDKTYEVKKLNHEEAFELFTWNAFKRKATDKGYFEICNNVVLYAEGLPLALRVMGSNLFGKTVEEWKSALAKYEKIPNKEVQNVLRVTYDNLEENEKEIFLDIACFFKGETVEYVEKTLQACGFFPKFGISVLTDRSLVSIDEYNRLRMHDLIQDMGREVVREVSPLEPGKRSRLWNHEDVIEVLTENSGTYRVQGMMVDLPDQYMVHLKDDSFKKMKNLKILIVRNGHFYGSPQHLPNNLRLLDWMEYPSSTLPSTFHPKKLVVLNLSRSRFTMQEPFKHLDSLTSMDLSHCEFLTKLPDVSGVPNLTELNLDYCTNLEQVHDSVGFLEKLIELRAYGCTKLKDFPHAIKLSSLKSLILNWCSSLQTFPTILGKMDNLISISIEGTGIEELPPSIGNLVALQELSMTSCLSLKELPENIDMLHNLRNLDIEGCPQLRSFLTKLRELGQSTLTFGNVQSLNLENCGLIDEDLPIIFNCFPNLASLVLSGNNFVTLPRCIQEYHSLEMLHLDNCKQLQEVISLPPNLQYINARNCISLTAESSNLLLSQETFEACELQVLVPGTSIPEWFDHITKGEYMTFWVRKKFPAIILCFALAIESEMKKSFNCEIRFYINSDEVYELEIPRCFSEMVTDHVWLYDLRTHPSIRLNDLESYLVDDWNQIEISCDKIIGPSNVTISWCGVHICREEDNMEDILFKDPDLDLDSSRETEKIDSDLDKNNDARIKSIGDFKNSKKDNDFYCFKNLEDYNNAASHTEMDHNQDKLLLHPKTLDSVTNDSMPLVCFGGKNVVEGSNMIASDHQAKAREKSKVTSFIQTPIANLDDADMEAFYAILDAETSILSLSNHNDIISESSNRIIPSEETKKALKTLQDFLTKDFSVLLRPNEYNTMKSTLDYLTNVPTEDGISVDIRSLVKEVSRQFTCWSHDYTNEGKKIEYTKAKLLKSDELEEGLEANKTLFREVKYLENELCNELEYLEDRKKELEELINGVRANIAASQEAKNMVVHTKREIFENAKILKVQRDELRGQVHCLRDEHELAKKIQANIRDEWAKLGEKFSKAAN* 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0306 1394 Gene3D Ribonuclease Inhibitor 701 911 IPR032675 -
Mtr3g0306 1394 Gene3D - 2 171 IPR035897 -
Mtr3g0306 1394 ProSiteProfiles TIR domain profile. 5 171 IPR000157 GO:0007165
Mtr3g0306 1394 SMART till_3 6 146 IPR000157 GO:0007165
Mtr3g0306 1394 Coils Coil 1298 1332 - -
Mtr3g0306 1394 Gene3D - 342 426 IPR042197 -
Mtr3g0306 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 1132 IPR044974 GO:0006952
Mtr3g0306 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1164 1371 IPR044974 GO:0006952
Mtr3g0306 1394 Gene3D Ribonuclease Inhibitor 518 700 IPR032675 -
Mtr3g0306 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Mtr3g0306 1394 PRINTS Disease resistance protein signature 207 222 - -
Mtr3g0306 1394 PRINTS Disease resistance protein signature 284 298 - -
Mtr3g0306 1394 PRINTS Disease resistance protein signature 377 391 - -
Mtr3g0306 1394 PRINTS Disease resistance protein signature 613 629 - -
Mtr3g0306 1394 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 149 IPR035897 -
Mtr3g0306 1394 Pfam TIR domain 6 175 IPR000157 GO:0007165
Mtr3g0306 1394 SUPERFAMILY L domain-like 481 875 - -
Mtr3g0306 1394 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1164 1371 - -
Mtr3g0306 1394 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 1132 - -
Mtr3g0306 1394 Coils Coil 1347 1367 - -
Mtr3g0306 1394 Gene3D - 172 337 IPR027417 -
Mtr3g0306 1394 Pfam NB-ARC domain 188 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0306 Mtr-Chr3 3503233 3511597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0306 6 780 WRKY Transcription Factor Family AT4G12020 31.086 1.51e-91 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0306 - - ccaj:109810288 2127.06