Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0304 ATGGGCGCTGAAAAGCCTAGATCTTGTGCAACCTACTTTGAGAATTCTAAACCCTACTTTGCCATGATCCTTTTACAGTTTGGCTATGCAGGCATGAACATCATAACCAAGCTTTCTCTCAATGGAGGGATGAGTCACTATGTCCTCGTTGTTTATCGCCATGCTTTTGCAACTATTGCTATAGCTCCGTTCGCCATTATCTTCGAATGGAAGGATCAACCAAAGATTACATTTTCAGTTTTCATGCAAATTTTACTCCTAGCTTTGCTTGGGCCAGTGATAGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCCCCAACATTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCGGTGTTATGCAGGATGGAAATAGTCAACTTGAAGAAGTTAAGATGCCAAGCAAAGGTGATTGGAACCATTTTAACTGTGGCTGGGGCAATGTTGATGACCTTGTACAAAGGACCAGTTTTGGAGTTGATGTGGACTAAATATATACCTCATAGTAATGCAAATATTACAAGTTCCTCAAGCAAGGATAATTGGTTCTTAGGCTCCATTTTACTAATCATTGCTACTCTTGCATGGTCATCCCTCTTTGTGTTACAAGCTAAAGCTATAGAAACATACAAGAATCATCAGCTAACACTCACATCACTTATATGTTTCTTTGGCACGATTCTAGCTTTTGCTACCACTTTGATTATGGAAAACAAAGATTCTGTGTGGACAATTGGTTGGGATATGAATTTATTAGCTGCTGCCTATGCGGGCATTGTTACATCAAGTATATCATACTACATACAAGGATTGGTAATAAAAAAGAAAGGGCCTGTTTTTGCAACTTCATTTAGCCCTTTGATGATGATCATTGTAGCCATTATGGGATTCTTTATCCTTGCAGAGCAGCTTTTTCTTGGAAGCGTGATTGGTTCCATATTGGTTGTCATAGGCTTATATTCTGTTTTGTGGGGAAAGCACAAAGAACAAGTGGAATGTAAAGTGTCGCCAGATGATATACCCTTGCCTATAAAGAGTGCTCGGATAAATGGAAATATGGGAGCATTTTCTGCATCCTTTGATAAACACAGTGAAGTAAAGTTGGATCAGAAAGAAGAATCAAACATTTCTTTAGTTATTATAAATTACAATAGAAGTTAA 1185 0.3823 MGAEKPRSCATYFENSKPYFAMILLQFGYAGMNIITKLSLNGGMSHYVLVVYRHAFATIAIAPFAIIFEWKDQPKITFSVFMQILLLALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVLCRMEIVNLKKLRCQAKVIGTILTVAGAMLMTLYKGPVLELMWTKYIPHSNANITSSSSKDNWFLGSILLIIATLAWSSLFVLQAKAIETYKNHQLTLTSLICFFGTILAFATTLIMENKDSVWTIGWDMNLLAAAYAGIVTSSISYYIQGLVIKKKGPVFATSFSPLMMIIVAIMGFFILAEQLFLGSVIGSILVVIGLYSVLWGKHKEQVECKVSPDDIPLPIKSARINGNMGAFSASFDKHSEVKLDQKEESNISLVIINYNRS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0304 394 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Mtr3g0304 394 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Mtr3g0304 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Mtr3g0304 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 336 - -
Mtr3g0304 394 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Mtr3g0304 394 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0304 Mtr-Chr3 3467806 3475668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0304 1 390 Nodulin-like Gene Family AT5G07050 63.568 1.72e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0304 - - gmx:100804359 565.074