Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0284 ATGGCCTCTGAATCCTCTAGCATCTCTGTCACTTCACAAGATCAAGGTGATTCTTCCCACTCCAAAAAAGAGGTGAACATGAAGGAGATTGAACAAGTTCAAACCTCAAACTCAAAATCAGACAAACCTATTGATTTTTTGAAGCTATCGAATGACAATTCGGTTTCCGTGTCGAAGATGCAAGAGCACAACTTTTTTGGCCCTATTCGAGTTGGTTCATCTTCTTCTTTACCTAATAACAACAATCAAGGGAAAGATGCGAACAACGGTGAAAAGAAGACTTCAGATCCAGTGTCTTTCTTGTGCTCTTTTTGCAAGAGACAATTTTCTACTTCACAGGCGTTGGGAGGACATCAGAACGCACATAAGGCGGAACGGGCATTAGAAAAGCAACGTCAACAAAGGTATGATGGTAGTGCTTTAAGTTTTGGGCAGCCTTACTTTAATCCTTATCTTAGTTATCCAAGTACTCTTTTTACACCTTATAGTTATAGGTCACTTGGGGTTAGATCAGAGTCAATGATTCAAAAACCACCTTATTTTAACCCTAGAATTACTCCACATAGTTTTGGGTATAGTCATAGTGCTTTGTTGCAAGAGATGTTAAACCCTTCTCTTGTGTCATTGAGAAATATGGGGGTTGGTAATAGCGTGATTGGAAATCTAGGTATTGGTGGTGCAACTACTTCAAAGATCGAATATGGTACATATAATAAAATTGGTGCTATTTTAGAATTGGGAGATTCTTCTACAAAGGTTGCTACAATTTCAAACTCAAACATGGAAAAGCAAATTATTGTGGCTCCTAATTCTACCAATGATGATGATATTCATGATCAATCAAAGTCCAACATTGAAGAAGAACCTTCTGATTCTGAATCTTCCGATCTTGATTTATCACTTAAGCTTTAA 912 0.3761 MASESSSISVTSQDQGDSSHSKKEVNMKEIEQVQTSNSKSDKPIDFLKLSNDNSVSVSKMQEHNFFGPIRVGSSSSLPNNNNQGKDANNGEKKTSDPVSFLCSFCKRQFSTSQALGGHQNAHKAERALEKQRQQRYDGSALSFGQPYFNPYLSYPSTLFTPYSYRSLGVRSESMIQKPPYFNPRITPHSFGYSHSALLQEMLNPSLVSLRNMGVGNSVIGNLGIGGATTSKIEYGTYNKIGAILELGDSSTKVATISNSNMEKQIIVAPNSTNDDDIHDQSKSNIEEEPSDSESSDLDLSLKL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0284 303 PANTHER ZINC FINGER PROTEIN KNUCKLES 72 303 - -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 268 303 - -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 1 16 - -
Mtr3g0284 303 PANTHER ZINC FINGER PROTEIN JAGGED 72 303 IPR045320 GO:0003700
Mtr3g0284 303 Pfam C2H2-type zinc finger 100 124 - -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 30 46 - -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 1 46 - -
Mtr3g0284 303 SUPERFAMILY beta-beta-alpha zinc fingers 99 128 IPR036236 -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 275 303 - -
Mtr3g0284 303 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mtr3g0284 303 Gene3D Classic Zinc Finger 81 142 - -
Mtr3g0284 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mtr3g0284 303 MobiDBLite consensus disorder prediction 68 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0284 Mtr-Chr3 3161076 3161987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0284 89 182 C2H2 Transcription Factor Family AT5G10970 47.368 5.09e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0284 - - mtr:MTR_3g011970 563.148