Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0281 ATGTTTGATTCAACACAAAATTTTACAAGTGCTGGTGAGTTTGATAGTGATGCTAGGATTTTGATGAATGGTTTGATACAAATGGGATCAAAGACACCATTAATGTTTGGAACACATATGTTTAACATAAATGGTACTCAAAGAAGGTATGGTTGGGTGCAGTGTAGCAGAGATATTACTAGTGAGGAATGCAGAACTTGTTTGAGTAATATGCTTGATGATGTTGAAAATTGTTGTATGGAGAAGCGAGTGTGGCGTATATTTTCGCCAAGTTGTGTTGTCATGTATGAAACTCAGCCATTCCTTTTGGCGGGTACGCAGCCTGACGCGCCTGCGCAACAGAAAGAAAAGAAGAGAAAACAAAAGGATACAATTCTAATAATAATCATAGTTGTAACCGCAATGGTAGTAGCGCTATTGGCTTTCAGCACATTCTACTACAGGTGCTTGGAACGGAAAAAAGATGAAAAAGAGATGCAAATCCTCGACGCAATTTTTTCTCCAGACGAGACTAACAACGAGGAGAATGTGAATTCTGACCTACCTATGATGCCTCTGAGCACTATTCTAAAAAGTACTCATAATTTTTCTGATAAATATAAATTGGGGGAAGGTGGATTTGGAACTGTCTACAAGGGTGTTTTAGCAGATGGAAGGGAAATTGCTGTTAAAAGGCTTTCGAAAACATCGGTTCAAGGTGTTGAGGAATTCAAGAATGAAGTAATGTTGATAGCCAAATTGCAGCATCGGAACCTTGTGAGACTGTTAGCTTTCTGCATTGAGCAAAATGAAAAGCTGCTTATCTATGAGTACATGCCTAATTCAAGCCTCAATTTCCAGCTACGCGATTTGGTAAAGGGCGCGCAGTTGGATTGGAAACAGCGATTAAACATTATTAATGGGATTGCTAAAGGGCTACTCTATCTTCACGAGGACTCTAGACTCAGGGTTATTCACAGAGACCTGAAAGCCAGCAATATTTTGTTAGATCATGAAATGAATCCAAAAATTTCAGACTTTGGACTAGCAAGAACATTTGGAGGAGATCAAGGGGAATCAAATACAATGAGAGTTGTGGGAACATATGGATACATGGCTCCAGAATATGCTATCGAAGGCTTGTTTTCAGTGAAGTCAGATGTTTTCAGCTTTGGCGTTCTTTTGCTAGAGATCATCAGTGGAAAAAGGAACAACAGATTCTATCTTTCAGAGCATGGCCAAAGCCTTCTCACATATGCATGGAACTTTTGGAGTGAAGGCAAAGGTTTAGAATTGATGGATCCATTGATATCAAATTCATGCGTGCCTAGTGAAGTTTTGAAGTGTATACAAATTGGCCTATTGTGCGTACAAGATAACGCAGCTGACAGGCCTACAATGTCAGGTGTTGTTCACATGCTTGGAAGTGACAATGTTACTCTTCCCAGTCCCATATGTCCATCTTTTTCTGTTGGAAGGTCTACAAATACAATTGAAGGAGGGTCGTCATCAAATGCTTCTACCTCTGTCACTGTCAATGAAATAACCCTATCCGAAGTGTTGCCTAGATGA 1551 0.3978 MFDSTQNFTSAGEFDSDARILMNGLIQMGSKTPLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLDDVENCCMEKRVWRIFSPSCVVMYETQPFLLAGTQPDAPAQQKEKKRKQKDTILIIIIVVTAMVVALLAFSTFYYRCLERKKDEKEMQILDAIFSPDETNNEENVNSDLPMMPLSTILKSTHNFSDKYKLGEGGFGTVYKGVLADGREIAVKRLSKTSVQGVEEFKNEVMLIAKLQHRNLVRLLAFCIEQNEKLLIYEYMPNSSLNFQLRDLVKGAQLDWKQRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQGESNTMRVVGTYGYMAPEYAIEGLFSVKSDVFSFGVLLLEIISGKRNNRFYLSEHGQSLLTYAWNFWSEGKGLELMDPLISNSCVPSEVLKCIQIGLLCVQDNAADRPTMSGVVHMLGSDNVTLPSPICPSFSVGRSTNTIEGGSSSNASTSVTVNEITLSEVLPR* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0281 516 SMART serkin_6 196 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0281 516 Pfam Salt stress response/antifungal 6 98 IPR002902 -
Mtr3g0281 516 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 513 - -
Mtr3g0281 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Mtr3g0281 516 SUPERFAMILY Protein kinase-like (PK-like) 176 467 IPR011009 -
Mtr3g0281 516 Pfam Protein tyrosine and serine/threonine kinase 200 466 IPR001245 GO:0004672|GO:0006468
Mtr3g0281 516 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Mtr3g0281 516 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Mtr3g0281 516 ProSiteProfiles Protein kinase domain profile. 196 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0281 516 Gene3D Phosphorylase Kinase; domain 1 160 271 - -
Mtr3g0281 516 Gene3D - 1 101 IPR038408 -
Mtr3g0281 516 Gene3D Transferase(Phosphotransferase) domain 1 272 473 - -
Mtr3g0281 516 PANTHER PROTEIN KINASE DOMAIN 9 513 - -
Mtr3g0281 516 CDD STKc_IRAK 202 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0281 Mtr-Chr3 3141551 3146068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0281 22 484 Receptor kinase-like Gene Family AT4G23230 46.266 1.12e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0281 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0281 - - cam:101505680 788.104