Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0278 ATGGCAAAAAAACTCATACTCATTTTCATCATTAGATTTATTAGCATCATTAGTCTTTTCACAAAATCAATTGCACAATCACCAAATTATGTAGGTGATGATTGTCACAACTCAACCGAACAATCTCTTACAGCTACATACAAATCTAACCTTAATAAAGTCCTCTCACTTCTTTCCTCTGATGCTATTGTAAGTAAAGGATATAATCATACAAGCATAGGAGAGAACACAATTGATGCTGTCTATGGTCTCTATGATTGTAGAGGTGATGTCACTGGATCATTTTGTCAATTTTGTGTCTCTACTGCTGCTTCAGATGTTCTTCAGCGCTGTCCTAATAGAGCTTCAGCTGTTATATGGTACAACTTTTGCATTTTCAGGTATTCCAACCATAATTTTTTTGGAAACCTCACAACAAGTCCATCATGGCAAAGGCCAGGGTCAAAAAACATCACTAATCCACAAGAACTTGATAAAGCTGAGGATAATATGCAAAGTTTAATAAGTGAAGCTACTTTGGAGACCAATAAGATGTATGCAATGGGGGAGTTCAATTTGAGTATTGAAAAGAGATATGGATTGGTGCAGTGTAGTAGGGACCTTAATGAAAAACAATGTAATCAATGTTTGGAAGCTATGTTGGACAAAGTTCCTAAATGCTGTGGGACAAAGATTGGTTGGCAGGTTCTTGCTCCAAGTTGTTTGATGAAGTATGATGATTTTATGTTCTACCAACTTACTTCTGCAACTTCTGCTCCTTTGCCAAATCCAGCCGGGGAAGGAGGTTCAAGTAAATCAAAGACTTTGATCATCACTATTGTCATTGTGTTGGTGGTGGTACTTGCTCTCATAAGTTGCTGTATCTTCTTCATATGGAGGCGCAATCGCTCAAATAAAGGTATTCACGTGTCTCACATATTAGTGTCTATGTATTTGTATCGATCCTCCAACAAAAGATGTATTTGTATCGATATCATGTCAGATGGAATACCATCAAAGACAATTCCCATATCTCATCATGGCCATATTCAAGGAGAGGATACATATAATGCAGACCTCCCAATAATCCCTTTAATATGGATTCGACAAAGCACTAATAACTTTTCAGAATTATGTAAACTAGGAGCAGGTGGTTTTGGTCCTGTTTACAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGGCTCTCTACAACATCTGGTCAAGGTTTGGAGGAGTTCACAAATGAAGTAATCTTTATAGCTAAATTACAACATAGAAACCTTGTGAGACTTTTGGGTTGTTGCATTGAGGATAATGAAAAGTTGCTTGTATATGAATACATGCCAAACTCTAGCCTTGACTTTCATCTATTTGATGAGGCAAAAAGAAAACTTCTAGATTGGAAGTTAAGACTGAACATTATCAATGGAATTGCAAAAGGACTCTTGTATCTTCATGAAGACTCTAGACTAAGAGTAATCCATAGAGACCTAAAAGCAAGTAATGTTCTCTTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGGTCAAAGTCAAGAAAAGACAAGAAGAGTTGTGGGCACATATGGTTACATGGCTCCAGAATACGCTATGCAAGGGTTATATTCAGGAAAATCAGATGTTTTCAGCTATGGAGTTCTTTTATTAGAAATAATTTGTGGAAAAAAGAATGGTGGATTCTATCTCGAAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAATCTTTGGTGTGAAGGAAAAAGTTTGGAACTGTTAGATCCAATACTGAAAAATACATGCACAACCAATGAAGTTATTAAATGCATACACATTGGTTTGTTGTGTGTACAAGAAGATGCAGTGGATAGACCAACCATGTCCAATGTTGTTGTAATGCTAGCAAGTGACACAATGACACTTCCCAATCCTAATCATCCAGCATTTTCAGTTGGAAGAAAAGTAACTGATGATCAATCAACATCTAAAGCTTCCAAAGATCCTTCTGTTAATGAAGTTACAATATCAAATGTTTTTCCTAGGTAG 2061 0.362 MAKKLILIFIIRFISIISLFTKSIAQSPNYVGDDCHNSTEQSLTATYKSNLNKVLSLLSSDAIVSKGYNHTSIGENTIDAVYGLYDCRGDVTGSFCQFCVSTAASDVLQRCPNRASAVIWYNFCIFRYSNHNFFGNLTTSPSWQRPGSKNITNPQELDKAEDNMQSLISEATLETNKMYAMGEFNLSIEKRYGLVQCSRDLNEKQCNQCLEAMLDKVPKCCGTKIGWQVLAPSCLMKYDDFMFYQLTSATSAPLPNPAGEGGSSKSKTLIITIVIVLVVVLALISCCIFFIWRRNRSNKGIHVSHILVSMYLYRSSNKRCICIDIMSDGIPSKTIPISHHGHIQGEDTYNADLPIIPLIWIRQSTNNFSELCKLGAGGFGPVYKGNLVDGTEVAIKRLSTTSGQGLEEFTNEVIFIAKLQHRNLVRLLGCCIEDNEKLLVYEYMPNSSLDFHLFDEAKRKLLDWKLRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSQEKTRRVVGTYGYMAPEYAMQGLYSGKSDVFSYGVLLLEIICGKKNGGFYLEEHGQSLLIYSWNLWCEGKSLELLDPILKNTCTTNEVIKCIHIGLLCVQEDAVDRPTMSNVVVMLASDTMTLPNPNHPAFSVGRKVTDDQSTSKASKDPSVNEVTISNVFPR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0278 686 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Mtr3g0278 686 MobiDBLite consensus disorder prediction 659 674 - -
Mtr3g0278 686 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Mtr3g0278 686 ProSiteProfiles Protein kinase domain profile. 368 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0278 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Mtr3g0278 686 Pfam Salt stress response/antifungal 161 239 IPR002902 -
Mtr3g0278 686 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Mtr3g0278 686 Gene3D - 143 243 IPR038408 -
Mtr3g0278 686 Gene3D - 29 133 IPR038408 -
Mtr3g0278 686 Pfam Domain of unknown function (DUF3403) 641 686 IPR021820 GO:0004674
Mtr3g0278 686 SUPERFAMILY Protein kinase-like (PK-like) 352 660 IPR011009 -
Mtr3g0278 686 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Mtr3g0278 686 SMART serkin_6 368 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0278 686 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 306 - -
Mtr3g0278 686 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 305 683 - -
Mtr3g0278 686 MobiDBLite consensus disorder prediction 649 674 - -
Mtr3g0278 686 Coils Coil 157 177 - -
Mtr3g0278 686 Pfam Protein tyrosine and serine/threonine kinase 372 638 IPR001245 GO:0004672|GO:0006468
Mtr3g0278 686 CDD STKc_IRAK 374 639 - -
Mtr3g0278 686 Gene3D Transferase(Phosphotransferase) domain 1 444 648 - -
Mtr3g0278 686 PANTHER PROTEIN KINASE DOMAIN 20 306 - -
Mtr3g0278 686 PANTHER PROTEIN KINASE DOMAIN 305 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0278 Mtr-Chr3 3104454 3114690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0278 13 686 Receptor kinase-like Gene Family AT4G05200 42.113 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0278 PK_Tyr_Ser-Thr 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0278 - - ahf:112718031 877.856