Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0277 ATGACAAAAAAACTCATACTCATTTCCATCCTTAGATTTCTTAGCATCATCACCCTTTTCACAAAATCACTTGCACAATCTCCAAATTATGTAGGTGATGATTGTCACAATTCAACTGAAAAATCACTTACAACTACATACAAATCCAACCTTAATAAAGTCCTTTCATTGCTCTCATCTGATGCTATTGTAAGTAAAGGATATAATCATACAAGTATAGGTGACAATACAGTTGATGCTGTCTATGGTCTGTATGATTGTAGAGGTGATGTAACAGGATCATTTTGTCAATTTTGTGTCTCCACTGCTGCCTCAGATATTCTTCAACACTGTCCTAATAGAGCTTCAGCTGTTATATGGTACAACTTTTGCATTCTCAGGTATTCCAACCATAATTTCTTTGGGAACCTCACAACAAATCCATCATGGCAAATGTTGGGGTCAAAAAACATCACTAATCCACAAGAACTTGATAAAGGTGAGGATAATATGCAAAGTTTAATAAGTGAAGCTACTTTGGAGACCAATAAGTTGTATGGAATGAGGGAATTCACTTTGAGTCCTACTGAAAAAAGATATGGATTGGTGCAGTGTAGTAGGGACCTTAGTGACAAGCAATGTAATCAATGTTTGGAGGCTATGTTAGACAAAGTTCCTAAATGTTGTGGGACAAAGATTGGTTGGCAAGTTGTTGCTCCAAGTTGTTTGATAAAGTATGATGATTTTATGTTCTACAAGCTTATTTTTCAAACTTCTCCTCCTTTGCCTAATTCAGCACTTGCAGGAGAGCAAGGAAGATCAAGTAAATCAAATATCTTAATCAAAATTATTGTGGTTGTGTTGGTGGTGGCACTTATTCTCATAAGTTGTTGTATCTTCATCGTATGGAGGCGAAAACATTCAAATAAAGATGGACTACCATCAAAGACAACTCCTATATCTCAACATGGCCATATTCAAGGAGAGGATACATATAATGCAGACCTCCCAATAATCCCTTTAATATGGATTCGACAAAGCACTAATAACTTTTCAGAATTTTGTAAACTAGGAGAAGGTGGATTTGGTCCTGTATACAAGGGTAATTTAGTTGATGGAACAGAAGTTGCAATCAAAAGGCTCTCTATAACATCTGGTCAAGGTTCAGAAGAGTTCAAGAATGAAGTAATCTTTATTGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGGTTGTTGCATTGAAGATAATGAAAAGTTGCTTGTATATGAATACATGCCAAACTCTAGCCTTGACTTTCATCTATTTGATGAGGAAAAAAGAAAACTTCTGGATTGGAAGTTAAGGCTGAACATTATCAATGGAATTGCAAAAGGACTCTTATACCTTCATGAAGACTCTAGACTTAGAGTAATCCATAGAGACCTAAAAGCAAGTAATGTTCTCTTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGACCAATGTCAAGAAAACACAAGAAGAGTTGTCGGCACATATGGATACATGGCACCAGAGTACGCTATGGAAGGGTTATATTCTGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTGCGGAAGAAGGAATGGTGGATTCTATCTCGCGGAGCATGGTCAAAGTCTTCTTGTATATAGTTGGAATCTTTGGTGTGAAGATAAAAGTTTGGAACTGTTAGATCCAATACTGAAAAATACATACACAACAAATGAAGTTATTAAATGCATACACATTGGTTTGTTATGTGTACAAGAAGATGCAGTGGATAGACCAACCATGTCCAATGTTGTTGTAATGCTAGCAAGTGACACAATGACACTTCCCAATCCTAATCATCCAGCATTTTCAGTTGGAAGAAAAGTAGTGGAAGGTGAATCAACATCAAAAGCTTCCAATGATCCTTCTGTCAATGAAGTAACAGTAACAAATATTTTACCTAGGTAG 1989 0.3585 MTKKLILISILRFLSIITLFTKSLAQSPNYVGDDCHNSTEKSLTTTYKSNLNKVLSLLSSDAIVSKGYNHTSIGDNTVDAVYGLYDCRGDVTGSFCQFCVSTAASDILQHCPNRASAVIWYNFCILRYSNHNFFGNLTTNPSWQMLGSKNITNPQELDKGEDNMQSLISEATLETNKLYGMREFTLSPTEKRYGLVQCSRDLSDKQCNQCLEAMLDKVPKCCGTKIGWQVVAPSCLIKYDDFMFYKLIFQTSPPLPNSALAGEQGRSSKSNILIKIIVVVLVVALILISCCIFIVWRRKHSNKDGLPSKTTPISQHGHIQGEDTYNADLPIIPLIWIRQSTNNFSEFCKLGEGGFGPVYKGNLVDGTEVAIKRLSITSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIEDNEKLLVYEYMPNSSLDFHLFDEEKRKLLDWKLRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKDQCQENTRRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGRRNGGFYLAEHGQSLLVYSWNLWCEDKSLELLDPILKNTYTTNEVIKCIHIGLLCVQEDAVDRPTMSNVVVMLASDTMTLPNPNHPAFSVGRKVVEGESTSKASNDPSVNEVTVTNILPR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0277 662 Gene3D Phosphorylase Kinase; domain 1 309 419 - -
Mtr3g0277 662 CDD STKc_IRAK 350 615 - -
Mtr3g0277 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 659 - -
Mtr3g0277 662 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Mtr3g0277 662 Pfam Domain of unknown function (DUF3403) 617 662 IPR021820 GO:0004674
Mtr3g0277 662 Gene3D Transferase(Phosphotransferase) domain 1 420 624 - -
Mtr3g0277 662 PANTHER PROTEIN KINASE DOMAIN 20 659 - -
Mtr3g0277 662 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0277 662 SUPERFAMILY Protein kinase-like (PK-like) 328 630 IPR011009 -
Mtr3g0277 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mtr3g0277 662 Gene3D - 29 133 IPR038408 -
Mtr3g0277 662 Gene3D - 140 244 IPR038408 -
Mtr3g0277 662 Pfam Protein tyrosine and serine/threonine kinase 349 613 IPR001245 GO:0004672|GO:0006468
Mtr3g0277 662 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Mtr3g0277 662 Pfam Salt stress response/antifungal 162 240 IPR002902 -
Mtr3g0277 662 SMART serkin_6 344 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0277 662 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0277 Mtr-Chr3 3093968 3100471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0277 9 662 Receptor kinase-like Gene Family AT4G05200 41.850 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0277 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0277 - - ahf:112718031 891.338