Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0274 ATGGGTTTTGAACCATTGATTTGGTATTGCAAGCCAGAACCAAACAGTATTTGGTCTAAAACAGTAGATAGTGCTTTTGGGTCATATACACCATGTGCAATCAATACTCTTGTTATCTCAACCTCAAATTTGGTTCTTATGGGGTTGTGTTTATATAGAATATGGCTTATTATTTTCAATGCCAAAGCTCAAAGGTTTTGTTTGAAATCAAATTACTATAATTATATTCTTGCAATGTTGGCTAGTTATTGTGCTTTTCAGCCTTTGTTGAGATTATGGACTGTAAATTCAGTCTTCAACCTGAACGAGGAAGCTGATTTTGCTCCTTTTGAGATAATGTCGCTGATCATTGAATCAGTTACATGGTTCTCAATGATAATTCTCATCCTCTTGGAAACAAAGATTTATATTAGGCAATTTAGGTGGTTGGTGAGGTTTGGAGTTATTTATGTTTTGGTGGGAGATATTGTAATGTTTGACCTTCTTCTGTCAGTGAAAGATTACTCTAGCAGATCTTCCCTATATCTGTATATTAGCACTATCATCTGCCAGGTGCTGTTTGGTACCTTACTTCTAGTTTACATTCCTAATTTGGTTCCATATTCTGGTCATGCAACATTCCAAGCTGACATACCTGACAACGGTGAATATGAACCACTTTGTGGAGATGATCAAGTTTGCCCTGAGATGCGCGCCAATTTCTTATCTAGATTAAGTTATGGATGGATAACTCCACTCATGAAACAAGGCTATCGAAAACCTATCACTGAAAAGGATGTTTGGAAGCTCGACAAATGGGACCAAACAGAAACGTTAAACGAAAACTTCCAAAAGTGCTGGACATCAGAATTTCAAAGCTCTAACCCTTGGCTTTTAAGAGCATTAAACAGTAGTCTAGGGAAAAGGTTTTGGTTTGGAGGCATCTTTAAGATTGGTAATGATCTTTCTCAATTTGTCGGGCCTATTCTTCTGAATCATCTCTTAGATTCAATGCAAAATGGAGATCCGTCTTGGATCGGTTACATCTACGCCTTCTCCATATTTGTTGGAGTGTCAGCCGGTGTTGTATGTGAGGCACAGTATTTCCAGAATGTTATGCGTGTTGGTTTTCGGCTTAGATCAACACTGGTAGCGGCTATATTCAGAAAATCTTTGAAGCTAACTCATGAAAGTAGAAAGAAGTTCTCAATGGGGAAGCTTATGAATATGATAACAACCGATGCCAATGCATTACAGCAAATATGTCAACAACTTCATGGACTATGGTCAGCACCATTCCGAATCATCATAGCAATGGTTCTCCTATACCAGCAACTAGGTGTTGCTTCACTTATTGGATCGCTATTGCTAGTTCTCATTATTCCACTGCAGACATTTGTGATTAGCAAAATGAGAAAACTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTGATGAATGAAATTCTTTCTGCCATGGATACAGTAAAATGTTATGCATGGGAAACAAGCTTTCAGTCTAGAATTCAAACCATTCGACATAACGAACTATCATGGTTTCGCAAAGCACAACTTCTATATGCTCTAAATAGTTTTATACTGAACAGCATCCCAGTTCTTGTGACAGTAACTTCCTTTGGAGTGTTTACTTTACTTGGTGGAGAATTAACACCTGCAAGAGCATTCACATCACTATCATTGTTTTCGGTTTTGCGCTTTCCTTTAAATATGCTTCCAAATTTACTGAGTCAGGTAGCAAATGCAAATGTCTCATTGCAACGTTTGGAGGAACTGTTTTCAGCCGAGGAACGAAATTTACAACAGAATCCACCTATTGTTCCAGGACTTCCAGCCATCTCAATAAAGAATGGATTCTTTTCATGGGATCCTAAGGAAGAGAAGAATCCCACATTATCAAATATCAATGTTGAAATACCAGTTGGAAGCTTAGTTGCAATCATTGGAGGTACTGGAGAAGGGAAAACATCACTTATTTCAGCAATGCTTGGAGAGCTACCTCTTGTATCTGATGGAAATGCTATAATCAGAGGCACTGTCGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACGGTTCGTGAAAATATATTATTTGGTTCAAAATTTGACCATGGACGGTATTCGAAGGCTATCGATGTCACTTCTTTGGAGCATGATCTCAACTTTTTACCTGGACGCGATTTTACGGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCTTTAGCTAGGGCTGTATATTCAAATTCAGATGTATATATATTTGATGATCCTTTGAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAAGAACTGTATAAAGGAAGGGCTGCAAGGAAAAACCAGGGTTCTTGTCACCAACCAGCTTCATTTTCTCCCTCAGGTGGATAAAATTATTCTTGTTAGTGAAGGAATGATTAAGGAGCAAGGAACATTTGAGGAGTTGTCGAAATGCGGGCCTCTATTTCAGAAACTAATGGAAAATGCAGGGAAAATGGAACAAGAAGTAGATAGTAACAAAGATAGTGATAATGTTACACCCTTGAGTGATGAGGCAATTGTAGAGTTACCAAATGATGCAAGCTATGAGAAGAAGGGAAAATTGCGAAAATCAGTACTTGTTAAGAAAGAAGAGCGGGAGACAGGCGTGGTTAGCTGGAAAGTTTTAACGAGGTACACATCCGCTTTGGGAGGACTGTGGGTAGTTGCTATACTTTTTGCATGCTACACATTAACAGAAGCTCTTCGAATTTCGAGTAGTACATGGTTGAGTGTGTGGACATCTCAAGATTCAACCGCAGCTTCTCGAGCAGGCTATTTTCTTTTCATCTATGCAATGTTCTCATTTGGACAGGTATCCGTAGCACTTGCAAACTCTTATTGGTTGATCATTTCAAGTCTTCGTGCTGCGAAAAGATTGCACGATGCAATGCTAGATAAAATTTTACATGCTCCAATGGTATTCTTCCAGACTAATCCTGTCGGCCGCATAATTAATAGATTTGCGAAAGACACGGGAGACATCGATACCAATGTTTTTAACTTGATGAATATGTTTCTGGGGCAAGTCTGGCAACTACTTTCAACATTTGTTCTTATAGGCACTGTCAGCACCATATCCCTGTGGGCCATAATGCCGCTTCTGATATTTTTCTATATTGCTTATATATACTACCAGAGCACGGCTCGAGAGGTGAAGCGCATGGATTCCATTACAAGATCTCCTGTTTATGCACATTTTGGAGAATCATTGAACGGTTTGTCAAGCATTCGTGCTTACAAAGTGTACGACAGGATGTCAAACATCAATGGGAAATTCATGGATAACAATATAAGATTTACTCTTGTGAATATTAGTTCAAACCGTTGGCTAACCATAAGGTTAGAAAGTTTAGGAGGCCTCATGATTTGGTTGATAGCGACATTTGCTGTCTTACAAAATGCAAGATCTGAAAATCCTACACTGATTGCATCTACAATGGGTCTACTTCTCAGTTATACATTGAACATAACAAATCTTTTAAGTGGTGTACTTAGACAAGCAAGTAGAGCTGAAAACAGTTTGAATTCGGTCGAGCGCGTTGACACATATATAAATTTAGAAACGGAGGGTCAAAGTATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACAAAAGGATCAATTGAGTTTGAGAATGTTGTTCTTAGTTATAGGCCGGAACTTCCTCCGGTCTTGCATGGATTGTCCTTTGTAGTGCCTTCAACTGAGAAGATAGGTGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCACTGTTCCGGATTGTGGAATTGCAAAGCGGAAGAATCATTATTGATGGATGTGATATTTCTACATTCGGACTAGTAGATTTGCGAAGAGTTCTTACTATCATACCACAGTCGCCTGTTCTTTTCTCCGGAACTGTTCGTTTCAATCTCGATCCATTTAATGAACACAGCGATGCTGATTTATGGGAAGCTTTGGAAAGGGCACACTTGAAAGATGTAATAAGAAGAAATTCTTTTGGTCTAGATGCTCAGGTTTCCGAGGGAGGAGACAACTTTAGTGTTGGACAAAGGCAACTATTAAGTTTGGCTAGAGCATTGCTAAGAAGATCAAAGGTTCTTGTCCTCGATGAAGCTACTGCTGCTGTAGATGTTAGAACAGACGCTCTAATACAGAAAACCATCCGACAAGAATTTCATTCCTGCACAATGCTCATCATTGCACATAGATTGAATACAATTATCGACTGCAATCGAATTCTGTTGCTCGATGCTGGCAAGGTTCTTGAATACAATTCACCTGAGAAACTCTTACAAAATGAAGAAACTGCATTCTACAAAATGGTTCAAAGTACCGGTCCTGCAAATGCCGAGTATTTATGTAGCTTAGTATTTGGAAGGAAAGAGAATAATTCAAATGAATTTAACAAGGAGTCGGAAAACAGTACGAGACAGTTAGCATCTACAAATTGGGCTGCTGCTACTCAGTTTGCAATAGCTTCTACACTTTCTTCTTTACATCAACACCTTCAAAGTCCAAATACTAACGACAATAAAGACATTCTTAATAGAACAAAGGATGCAGTAGTTACACTTCAAGAAGTTCTAGAAGGAAAGCATGATGATACTATAGAAGAGACATTGACTCAATATCATGTTCCTACAGATAGATGGTGGTCTACTCTCTACAAAGTTATTGAAGGTCTTGCTGTCTTGATCAGGTTGCCTCAGGACAACAACTATAACCAATTAGAACCTGATTTTGAAGGAAGATCATTTGACTAA 4842 0.3887 MGFEPLIWYCKPEPNSIWSKTVDSAFGSYTPCAINTLVISTSNLVLMGLCLYRIWLIIFNAKAQRFCLKSNYYNYILAMLASYCAFQPLLRLWTVNSVFNLNEEADFAPFEIMSLIIESVTWFSMIILILLETKIYIRQFRWLVRFGVIYVLVGDIVMFDLLLSVKDYSSRSSLYLYISTIICQVLFGTLLLVYIPNLVPYSGHATFQADIPDNGEYEPLCGDDQVCPEMRANFLSRLSYGWITPLMKQGYRKPITEKDVWKLDKWDQTETLNENFQKCWTSEFQSSNPWLLRALNSSLGKRFWFGGIFKIGNDLSQFVGPILLNHLLDSMQNGDPSWIGYIYAFSIFVGVSAGVVCEAQYFQNVMRVGFRLRSTLVAAIFRKSLKLTHESRKKFSMGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLLLVLIIPLQTFVISKMRKLTKEGLQQTDKRVGLMNEILSAMDTVKCYAWETSFQSRIQTIRHNELSWFRKAQLLYALNSFILNSIPVLVTVTSFGVFTLLGGELTPARAFTSLSLFSVLRFPLNMLPNLLSQVANANVSLQRLEELFSAEERNLQQNPPIVPGLPAISIKNGFFSWDPKEEKNPTLSNINVEIPVGSLVAIIGGTGEGKTSLISAMLGELPLVSDGNAIIRGTVAYVPQISWIYNATVRENILFGSKFDHGRYSKAIDVTSLEHDLNFLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFKNCIKEGLQGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKCGPLFQKLMENAGKMEQEVDSNKDSDNVTPLSDEAIVELPNDASYEKKGKLRKSVLVKKEERETGVVSWKVLTRYTSALGGLWVVAILFACYTLTEALRISSSTWLSVWTSQDSTAASRAGYFLFIYAMFSFGQVSVALANSYWLIISSLRAAKRLHDAMLDKILHAPMVFFQTNPVGRIINRFAKDTGDIDTNVFNLMNMFLGQVWQLLSTFVLIGTVSTISLWAIMPLLIFFYIAYIYYQSTAREVKRMDSITRSPVYAHFGESLNGLSSIRAYKVYDRMSNINGKFMDNNIRFTLVNISSNRWLTIRLESLGGLMIWLIATFAVLQNARSENPTLIASTMGLLLSYTLNITNLLSGVLRQASRAENSLNSVERVDTYINLETEGQSIIETNRPPPGWPTKGSIEFENVVLSYRPELPPVLHGLSFVVPSTEKIGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGCDISTFGLVDLRRVLTIIPQSPVLFSGTVRFNLDPFNEHSDADLWEALERAHLKDVIRRNSFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFHSCTMLIIAHRLNTIIDCNRILLLDAGKVLEYNSPEKLLQNEETAFYKMVQSTGPANAEYLCSLVFGRKENNSNEFNKESENSTRQLASTNWAAATQFAIASTLSSLHQHLQSPNTNDNKDILNRTKDAVVTLQEVLEGKHDDTIEETLTQYHVPTDRWWSTLYKVIEGLAVLIRLPQDNNYNQLEPDFEGRSFD* 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0274 1613 Pfam ABC transporter 634 769 IPR003439 GO:0005524
Mtr3g0274 1613 Pfam ABC transporter 1252 1400 IPR003439 GO:0005524
Mtr3g0274 1613 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524
Mtr3g0274 1613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 840 IPR003439 GO:0005524
Mtr3g0274 1613 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0274 1613 CDD ABCC_MRP_domain1 615 816 - -
Mtr3g0274 1613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1468 IPR027417 -
Mtr3g0274 1613 SUPERFAMILY ABC transporter transmembrane region 289 599 IPR036640 GO:0005524|GO:0016021
Mtr3g0274 1613 CDD ABCC_MRP_domain2 1233 1453 - -
Mtr3g0274 1613 Gene3D - 594 863 IPR027417 -
Mtr3g0274 1613 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 38 1490 - -
Mtr3g0274 1613 Gene3D - 1218 1471 IPR027417 -
Mtr3g0274 1613 Gene3D ABC transporter type 1, transmembrane domain 292 593 IPR036640 GO:0005524|GO:0016021
Mtr3g0274 1613 SUPERFAMILY ABC transporter transmembrane region 912 1215 IPR036640 GO:0005524|GO:0016021
Mtr3g0274 1613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1469 IPR003439 GO:0005524
Mtr3g0274 1613 Coils Coil 574 601 - -
Mtr3g0274 1613 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 915 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0274 1613 ProSitePatterns ABC transporters family signature. 1372 1386 IPR017871 GO:0005524
Mtr3g0274 1613 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 38 1490 - -
Mtr3g0274 1613 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Mtr3g0274 1613 SMART AAA_5 1261 1440 IPR003593 -
Mtr3g0274 1613 SMART AAA_5 643 823 IPR003593 -
Mtr3g0274 1613 Gene3D ABC transporter type 1, transmembrane domain 876 1216 IPR036640 GO:0005524|GO:0016021
Mtr3g0274 1613 Pfam ABC transporter transmembrane region 915 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0274 1613 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g0274 1613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 839 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0274 Mtr-Chr3 3018094 3030547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0274 560 832 Calmodulin-binding Proteins AT2G36910 26.280 1.67e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0274 - K05665 mtr:MTR_3g011820 3143.98