Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0264 ATGGCTTTGACTACATCAACCCTAACAGAAAAGAAGAAGGTTTTGTTTATATTGGGTGCAACAGGAACTGGGAAGACTAAACTTTCCATCAACTTAGGAACTCAATTCCCATCGGAGATCATCAATTCAGACAAAATTCAAGTCTATAAAGGCCTTGACATTGTCACCAATAAGGTACAAGAATCCGAACGTCATTCAATTCCACATCATATCTTAGGCATCATTGACGATCCCGAATATGATTTCACCGTGGATGATTTTTGCAATCACGTGCTTGAAGCTTTAAATCTCATAACTGAAAATGGACACCTACCTATTATTGTAGGAGGGTCAAATTCTTACCTAAAAAAATTAATTGAGGACCCAACCATTGCATTTCATTCTAAATATGACTGTTGTTTTATTTGGGTCGACGTGTCTTTGCCTATTCTATGTCCATACTTAGACAAAAGAGTTGATGAAATGGTTGAGTCAGGGATGGTAGATGAGATAAGAGACTTCTTTGTACCTGGAGCAGATTACACAAAAGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTCATTCTTATTTTGAGATAGAAAAGAAAGAATGTATTGATGATGCTCAAAAAGAAAAGATACTAAAGGAAGCTATTACAAAAACCAAACAAAATACTTTCATATTGGCTGAAAATCAACTCTCGAAGATCCGAAATATGGCTGATAAGCTTGGATCAATGATAAACAATATAAATTCTACAGAAGTCTTTGAGGCCATTCTAAGGGGAGAAGATTATCATCATTTGCATCAAGAGATTGTGATTAATCCAAGTATGAAGATAGTGAAGAGATTTCTAGAGGAGACAAGCCCTATATTTGGAAATTCAAAATATTCAAATGAAAATGGGAAACACACATCTAATGGTGTTTGA 912 0.3553 MALTTSTLTEKKKVLFILGATGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIVTNKVQESERHSIPHHILGIIDDPEYDFTVDDFCNHVLEALNLITENGHLPIIVGGSNSYLKKLIEDPTIAFHSKYDCCFIWVDVSLPILCPYLDKRVDEMVESGMVDEIRDFFVPGADYTKGIRRAIGVPELHSYFEIEKKECIDDAQKEKILKEAITKTKQNTFILAENQLSKIRNMADKLGSMINNINSTEVFEAILRGEDYHHLHQEIVINPSMKIVKRFLEETSPIFGNSKYSNENGKHTSNGV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0264 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 156 IPR027417 -
Mtr3g0264 303 Pfam IPP transferase 47 121 - -
Mtr3g0264 303 Pfam IPP transferase 128 232 - -
Mtr3g0264 303 Gene3D - 11 279 IPR027417 -
Mtr3g0264 303 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 296 - -
Mtr3g0264 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Mtr3g0264 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 296 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0264 Mtr-Chr3 2916220 2917131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0264 95 280 C2H2 Transcription Factor Family AT2G27760 29.858 6.71e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0264 K10760 - gmx:121173984 417.157