Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0229 ATGGGGTCTCAAGTTGTTGATGAAAGTAATAATGAAAACCATTCGCAGTTCCAGCCTCTGGCACGGCAAAATTCAATGTACAATCTTACCCTTGATGAAGTTCAGAATCACTTAGGTGACTTAGGAAAGCCACTAAGTAGTATGAACCTTGACGAGCTTCTGAAAAATGTATGGACTGTTGAGGCAAACCAATCAATTCGCATGGAAAACGAGAACACAGCTCAAGCCGGAGAAGTTGTTTTTCAACGTCAACCTAATCTGTCGTTAACCGGTCCGTTAAGCAAGAAGACAGTTGATGAAGTTTGGAGAGATATCCAACAAAGCAACGATCATGAGGAGGTGAAGTCTCAAGAGATACAATCTACTTTGGGTGAGATGACATTAGAGGATTTTTTGGTGAAAGCAGGCGTTGTTTCAGCTGCATCTTCAAATAGAAAAAATACTAATGGTCCTACTCCTAAAGTCAGTGTTGTTGAATCGAATGTAGCGTTGCCACAGTTTTCTCCACATGGTCCGTGGATACAGTATGCACAACCACACTATCAGCATCCACAACAAAGTGTGATGGCGACTTATGTTCCGAGCCAGATCATAGCGCAGTCATTGCACATGGCAGCCGGTGCTCCGTCGGACAGTGTTCCATATACAGATGGTCAGGTGGCATTGGCTTCACCAGTAATAGGAAACTTATCTGATACACAGAAATCTGCGAGAAAACGGGGACCGGAGGACATGATTGAGAGGACTGTTGAGAGGAAGCAGAAGAGGATGATTAAGAATCGGGAATCTGCTGCGCGCTCAAGAGCAAGGAAACAGGCATACACAACTGAGTTGGAGATCAAAGTCTCGCGACTGGAAGAGGAAAATGATAAGCTGAGGAAAGAGAAGGAGCTTGAGAATATGCTAGCTAATGCTCCGCCGCCGGAACCTAAATGCCAGCTTCGTCGCGTATCATCAGCTTCATTTTGA 969 0.4469 MGSQVVDESNNENHSQFQPLARQNSMYNLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVEANQSIRMENENTAQAGEVVFQRQPNLSLTGPLSKKTVDEVWRDIQQSNDHEEVKSQEIQSTLGEMTLEDFLVKAGVVSAASSNRKNTNGPTPKVSVVESNVALPQFSPHGPWIQYAQPHYQHPQQSVMATYVPSQIIAQSLHMAAGAPSDSVPYTDGQVALASPVIGNLSDTQKSARKRGPEDMIERTVERKQKRMIKNRESAARSRARKQAYTTELEIKVSRLEEENDKLRKEKELENMLANAPPPEPKCQLRRVSSASF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0229 322 Gene3D - 250 304 - -
Mtr3g0229 322 CDD bZIP_plant_BZIP46 252 298 - -
Mtr3g0229 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Mtr3g0229 322 SMART brlzneu 248 304 IPR004827 GO:0003700|GO:0006355
Mtr3g0229 322 MobiDBLite consensus disorder prediction 296 322 - -
Mtr3g0229 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 320 IPR043452 GO:0003700|GO:0045893
Mtr3g0229 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Mtr3g0229 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Mtr3g0229 322 PANTHER BZIP TRANSCRIPTION FACTOR 2 320 - -
Mtr3g0229 322 Coils Coil 275 304 - -
Mtr3g0229 322 Pfam bZIP transcription factor 252 297 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0229 Mtr-Chr3 2539617 2544553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0229 18 322 bZIP Transcription Factor Family AT3G56850 52.427 1.55e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g0229 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0229 K14432 - gmx:100784924 427.557