Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0183 ATGGCTGGGATTGACGAAAATCTTGCACTCAATGGTGATTGGGGTCTTCCTAGTCCAAGTCCTAGGTCCCTTTTTTCTAGACTGTTAGAAGAAGATAATAATAATGTAATACGACCGAATTCAGAACATTCGGGAAGTGGTAGAACTGAGGGACAAGATGGTGATTCCGGTACCCAATTGAGCGATACAAGTTATCCAACTGAGAACAAGTGGAGTTCGCGGGGTGGTCTTGTTGATAGAATTGCTGCTAGAACTGGATTTAATGCTCCAAGGTTGAATACAGAGAGCATTAGATCTACTGAACTTTCGCTCAATTCTGAGATTCAGTCTCCTTACTTGACTATACCGCCTGGTCTTAGTCCTACTACACTTTTAGATTCTCCCGTGTTCCTTGCAAATTCATTGGCACAGCCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAACGGCAACATCCGCAGCACAGAATTATCATCGGATGTTCAAGAAAAATCTAAACATAATGGCTTTAATGATATTTATGCATCTTCTTTCGCTTTCAAGCCTACAGCAGATTCGGGCCCCTCTTTTTATCAAGGTGCTGGTAGAAATATGAATACAACTACACTTTCTCAGCATTCCCTTCATGGTTTTGAAGCTTCAGTTCAATCTCAAAGAGTTGATGCGGTCAATGTTCAAACTGAGAACAAAAGTAGCCTCCATCTTAAGGCAGAGTTTTCTGACTCGCCACCTCAAAAAGACAATTCTACACAATTGGAAGAGCAAGCAGATGAAGAGGGAGAACAGAGAGTTAACGGAGACTCGTTGGTTGCTGGTGTTGGTGGTACTCCGTCGGAGGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGCGAGTACCCTCGAAGTTACTACAAGTGTACTCATTCAAATTGTCCAGTTAAAAAGAAAGTAGAACGTTCTCATGAGGGCCATATAACGGAGATAATCTATAAGGGGGCCCACAACCACCCGAAACCTCCTCCAAGTCGCCGGTCAGGCATAGGGTCAACTAACCCTCATGCTGACATGCAAGTGGACAATCCTGAACATGGTGAACCACAGGGTGGTGGTGGCGGTGACCTAGGCTGGGCTAATGTACAGAAGGGAAATATAGCTGGAGCTGGTAATTGGAAGCATGACAACCTTGAAGCAACATCAGCTGTCAACCCCGGGTATGGTAACCAATCCACCAATCTGCAAACTCAAAATGGTACTACTCACATTGATTCCGGAGATGCAGTGGATCGCTCATCTACATTTTCAAATGAAGAAGAGGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGCGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATATGCTGAGATGAGCGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTTCAGACTACCAGTGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAGAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCTGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACATACGAGGGAAAGCACAATCACGATGTCCCTGCTGCTCGTTCCAGCAGTCACGTCAATGCGAATGCTTCTAACGCAGCTCAAGGACAAGCTTCTGGTCTTCTTCAAAACCATATGCATAGACCTGAACCATCTCAAGTTCACAATGGCATGAGGCCTTCGCTTGGTTCGTTCAACCTTCCTGGGAGACAGCAGCTAGGTCATCCGCATGGCTTCTTTGGCATGAATCAACACCTGTCGAACCTTGCAATGTCGGGATTGGGCCCTTCCTTGCAAGCAAAGCTTCCCGGAATGCCTATGAACCCATTCATGATGCAACAACAACAACAACAACAACGCGCCGCAAATGAAATGGGATTCATGTTACCAAAGGGAGAACCAAATGTGGACGCTAATCCTGAACGTGGCGGCCTTAACATGCAAAATGGCTCATCATCAATGTATCAAGATATTATGAATCACATGCCTCTTGGACCTCACATGTAA 2115 0.4478 MAGIDENLALNGDWGLPSPSPRSLFSRLLEEDNNNVIRPNSEHSGSGRTEGQDGDSGTQLSDTSYPTENKWSSRGGLVDRIAARTGFNAPRLNTESIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSNGNIRSTELSSDVQEKSKHNGFNDIYASSFAFKPTADSGPSFYQGAGRNMNTTTLSQHSLHGFEASVQSQRVDAVNVQTENKSSLHLKAEFSDSPPQKDNSTQLEEQADEEGEQRVNGDSLVAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSTNPHADMQVDNPEHGEPQGGGGGDLGWANVQKGNIAGAGNWKHDNLEATSAVNPGYGNQSTNLQTQNGTTHIDSGDAVDRSSTFSNEEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAAQGQASGLLQNHMHRPEPSQVHNGMRPSLGSFNLPGRQQLGHPHGFFGMNQHLSNLAMSGLGPSLQAKLPGMPMNPFMMQQQQQQQRAANEMGFMLPKGEPNVDANPERGGLNMQNGSSSMYQDIMNHMPLGPHM* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0183 704 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 SMART WRKY_cls 494 553 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 MobiDBLite consensus disorder prediction 239 288 - -
Mtr3g0183 704 MobiDBLite consensus disorder prediction 551 606 - -
Mtr3g0183 704 Gene3D WRKY domain 273 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 MobiDBLite consensus disorder prediction 396 468 - -
Mtr3g0183 704 ProSiteProfiles WRKY domain profile. 489 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 MobiDBLite consensus disorder prediction 454 468 - -
Mtr3g0183 704 Gene3D WRKY domain 481 547 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 SUPERFAMILY WRKY DNA-binding domain 277 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 SUPERFAMILY WRKY DNA-binding domain 486 554 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 MobiDBLite consensus disorder prediction 11 72 - -
Mtr3g0183 704 MobiDBLite consensus disorder prediction 328 379 - -
Mtr3g0183 704 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 621 IPR044810 GO:0003700
Mtr3g0183 704 MobiDBLite consensus disorder prediction 399 429 - -
Mtr3g0183 704 Pfam WRKY DNA -binding domain 495 551 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g0183 704 MobiDBLite consensus disorder prediction 556 578 - -
Mtr3g0183 704 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 88 621 - -
Mtr3g0183 704 MobiDBLite consensus disorder prediction 27 71 - -
Mtr3g0183 704 ProSiteProfiles WRKY domain profile. 280 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0183 Mtr-Chr3 2068162 2072894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0183 1 699 WRKY Transcription Factor Family AT5G56270 49.051 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g0183 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0183 K18835 - gmx:100127395 1023.46