Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0180 ATGAAAAAAAGAGAAAACAAACCAAGAAACATGTCATGTAAATGTTCATCAACAAGAACAAGAACATGTGCTATTGTTCTTCATGTGATTGTTTCATTCATAACACTAACCTTAACATCATCAACAATAACAACCTTTGATTCAGCAACGTTGTTAAACAATTTCAAACACTCAAACATCATTTCTGATCCAACCAACTTCCTTTCAAACTGGTCACTTTCATCTTCACCATGTTTTTGGCAAGGTATCACTTGTTCACTTTCCGGTGATATCACCACCGTAAACCTCACCGGAGCTTCACTTTCCGGCAACCATCTTAGCCTTCTCACTTTCACTTCAATACCATCTTTGCAAAATCTTCTTTTGCATGGAAATTCATTCACTACTTTCAACTTATCTGTTTCACAACCTTGCTCTCTTATCACTCTTGATCTTTCTTCCACCAATTTCTCAGGAACTTTCCCTTTTGAAAATTTTGTTTCTTGTTATAGTCTTAGTTACCTTAACTTGTCTAGGAATTTCATAACTTCAACAACAAAGAATCATAGTTTTGTAGGGTTTGGTTCTTCTTTGGTTCAACTTGATATGTCTAGAAACATGTTTTCTGATGTTGATTATGTTGTTGAAGTTTTGACAAAGTTTGAGAGTTTGGTTTTTGTTAATTTTTCTGACAACAAAATCTATGGTCAAATCAGTGATTCACTTGTTCCTTCTGTGAATTTGTCAACTTTGGATTTGTCTCATAATTTGTTGTTTGGGAAACTACCCTCTAAAATTGTTGGTGGTAGTGTTGAAATTTTGGATCTTTCAAGCAACAATTTTTCTTCAGGGTTTTCTGAGTTTGATTTTGGTGGGTGTAAGAAACTTGTTTGGTTGAGTTTATCTCACAATGTGATATCTGATTTTGAGTTTCCACAAAGTTTGAGAAATTGTCAAATGTTGAAAAGTTTGGACCTTTCTCAAAATCAATTAAAGATGAAGATTCCTGGTGCTGTTCTTGGTGGGTTGAGGAATTTGAAGGAACTTTATTTAGGGAATAATCTTCTTTATGGAGAAATATCTAAGGAGCTTGGAAGTGTTTGTAAGAGTTTGGAAATTCTTGATCTTTCTAAGAATAAACTCTCTGGTGAGTTTCCTTTGGTTTTTGAAAAATGTTCATCTTTGAAGAGTCTTAACCTAGCTAAGAATTATCTCTATGGTAATTTTCTTGAAAATGTTGTTGCCAAACTTGCTAGTCTTAGGTATCTCTCTGTTTCCTTCAACAACATAACCGGAAATGTTCCTTTGTCAATTGTTGCAAATTGTACACAACTTCAGGTTCTTGACCTGAGTTCAAATGCCTTCACCGGTAACATTCCCTCGATGTTCTGTCCTTCAAAATTGGAGAAGTTGCTTTTAGCTAATAATTACCTTTCAGGGACTGTGCCTGTGAAACTCGGTGAATGCAAGAGTTTGAGAACTATTGATTTTAGCTTCAACAATTTGAGTGGTTCAATACCTTCAGAAGTTTGGTTTTTGCCTAATCTTTCTGACTTGATTATGTGGGCAAATAGACTCACTGGTGAGATTCCTGAAGGAATTTGTGTCAATGGAGGGAACCTTGAGACATTGATTCTTAACAACAATTTGATTTCTGGTTCGATTCCCAAGTCCATTGCAAATTGTACCAACATGATTTGGGTTTCGCTTGCTAGCAACCGCATTACCGGAGAAATACCCGTTGGTATCGGGAATTTGAATGAACTTGCTATTCTCCAATTAGGTAACAATTCTCTTGTTGGAAAGATTCCTCCTGAGATTGGAATGTGTAAGAGACTGATATGGTTGGATTTGACGAGCAATAACCTCACCGGTACTATTCCACCTGACCTTGCAAATCAAGCAGGATCGGTTATTCCGGGGAGTGTTTCGGGTAAACAGTTTGCATTTGTGAGAAATGAAGGTGGAACTAATTGTCGAGGAGCCGGAGGACTAGTTGAGTTTGAGGATATAAGGGCAGAGAGGCTTGAAGATTTTCCTATGGTACATTCTTGTCCGTTAACAAGAATATATTCTGGTTATACAGTTTATACTTTTACCACCAATGGAAGCATGATTTACCTTGACCTTTCCTACAATTTCTTGTCAGGGACTATTCCGGAAAAATTCGGTGCAATGGCCTATTTGCAGGTCTTGAATCTAGGACACAATAGGCTCAATGGAAAAATTCCTGAAAGCCTTGGTGCATTAAAACCTATAGGAGTGCTTGATTTATCTCATAATAACCTTCAAGGATTCATCCCTGGATCATTACAATCTCTATCGTTTCTCAGTGACTTTGATGTGTCAAATAATAACCTTAGTGGATTGATTCCTTCTGGTGGTCAGCTAACTACTTTCCCGGCATCTAGATACCAAAACAACTCGAATCTTTGTGGTGTTCCGTTACCAACATGCAGCGCTTCAAATCACACGGTAGCTGTTCGTATGTTGAAGAAGAAGAAGCAACCTATTGCAGTTTTGACAACCACGTGCCTCCTTTTCTTTCTCTTGTTTGTCGTTGTGTTTGTGCTGGCTTTGTATCGAGTGCAAAAGACTCGGAAGAAGGAAGAATTGAGAGAAAAATATATAGAAAGTCTTCCGACTTCTGGTAGCAGTAGTTGGAAGCTCTCTGGCTTTCCTGAGCCTCTGAGCATCAATGTTGCTACATTCGAGAAGCCTCTGCGTAAGTTGACGTTTGCACATCTCCTCGAGGCTACTAATGGTTTCAGCGCCGAAAGCTTGATAGGCTCGGGAGGTTTTGGTGAAGTCTATAAGGCTAAGATGAAAGACGGCAGTGTTGTTGCTATCAAGAAACTCATTCGTGTCACAGGTCAGGGAGACAGAGAGTTCATAGCTGAAATGGAAACGATTGGGAAGATTAAGCACCGGAACCTTGTTCCACTTCTTGGTTACTGTAAAATTGGAGATGAAAGGCTACTTGTGTATGAGTACATGAAATATGGAAGTTTAGAAACTGTTCTACATGAGAGAATCAAAAGTTCAGAGCTTGCTTGGGAAACAAGAAAGAAGATAGCACTAGGATCAGCAAGAGGTCTTGCATTTCTTCATCATAGTTGCATACCTCATATTATACATAGAGACATGAAGTCAAGCAATATTCTTCTTGACGAAAATTTCGAGGCTAGAGTTTCAGATTTCGGTATGGCAAGATTGGTTAATGCTCTTGACACTCATCTCACAGTTAGCACGCTTGCAGGAACACCAGGTTATGTACCACCAGAATACTATCAGAGTTTCCGATGCACAGCGAAAGGTGATGTTTATAGTTATGGTGTCATACTGCTAGAACTTCTATCAGGGAAGAGACCAATCAACTCGTCCGAGTTTGGCGATGATAACAATCTTGTTGGATGGTCTAAGAAGCTTTACAGAGAAAGAAGAATTAGTGAAATACTTGATCCTGAATTGGTTGTGCAAACTTCTAGTGAAGGTGAACTTTTTCAATATTTGAAAATTGCTTTTGAATGTTTAGAGGAAAGACCGTACCGGCGTCCGACAATGATACAAGTGATGGCAATGTTTAAAGAGCTTCAAGTTGATACAGATAATGATAGTGTTGTTGATGGTTTCTCTATGAAAGACAATGTTATTGATGAAGCATGA 3645 0.3819 MKKRENKPRNMSCKCSSTRTRTCAIVLHVIVSFITLTLTSSTITTFDSATLLNNFKHSNIISDPTNFLSNWSLSSSPCFWQGITCSLSGDITTVNLTGASLSGNHLSLLTFTSIPSLQNLLLHGNSFTTFNLSVSQPCSLITLDLSSTNFSGTFPFENFVSCYSLSYLNLSRNFITSTTKNHSFVGFGSSLVQLDMSRNMFSDVDYVVEVLTKFESLVFVNFSDNKIYGQISDSLVPSVNLSTLDLSHNLLFGKLPSKIVGGSVEILDLSSNNFSSGFSEFDFGGCKKLVWLSLSHNVISDFEFPQSLRNCQMLKSLDLSQNQLKMKIPGAVLGGLRNLKELYLGNNLLYGEISKELGSVCKSLEILDLSKNKLSGEFPLVFEKCSSLKSLNLAKNYLYGNFLENVVAKLASLRYLSVSFNNITGNVPLSIVANCTQLQVLDLSSNAFTGNIPSMFCPSKLEKLLLANNYLSGTVPVKLGECKSLRTIDFSFNNLSGSIPSEVWFLPNLSDLIMWANRLTGEIPEGICVNGGNLETLILNNNLISGSIPKSIANCTNMIWVSLASNRITGEIPVGIGNLNELAILQLGNNSLVGKIPPEIGMCKRLIWLDLTSNNLTGTIPPDLANQAGSVIPGSVSGKQFAFVRNEGGTNCRGAGGLVEFEDIRAERLEDFPMVHSCPLTRIYSGYTVYTFTTNGSMIYLDLSYNFLSGTIPEKFGAMAYLQVLNLGHNRLNGKIPESLGALKPIGVLDLSHNNLQGFIPGSLQSLSFLSDFDVSNNNLSGLIPSGGQLTTFPASRYQNNSNLCGVPLPTCSASNHTVAVRMLKKKKQPIAVLTTTCLLFFLLFVVVFVLALYRVQKTRKKEELREKYIESLPTSGSSSWKLSGFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAKMKDGSVVAIKKLIRVTGQGDREFIAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKYGSLETVLHERIKSSELAWETRKKIALGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPINSSEFGDDNNLVGWSKKLYRERRISEILDPELVVQTSSEGELFQYLKIAFECLEERPYRRPTMIQVMAMFKELQVDTDNDSVVDGFSMKDNVIDEA* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0180 1214 SUPERFAMILY Protein kinase-like (PK-like) 897 1188 IPR011009 -
Mtr3g0180 1214 Gene3D Transferase(Phosphotransferase) domain 1 992 1208 - -
Mtr3g0180 1214 Pfam Protein kinase domain 918 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0180 1214 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Mtr3g0180 1214 Pfam Leucine rich repeat 363 423 IPR001611 GO:0005515
Mtr3g0180 1214 Pfam Leucine rich repeat 722 780 IPR001611 GO:0005515
Mtr3g0180 1214 SUPERFAMILY RNI-like 332 622 - -
Mtr3g0180 1214 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
Mtr3g0180 1214 Gene3D Phosphorylase Kinase; domain 1 884 991 - -
Mtr3g0180 1214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1037 1049 IPR008271 GO:0004672|GO:0006468
Mtr3g0180 1214 Pfam Brassinosteroid receptor island domain 629 693 IPR045381 -
Mtr3g0180 1214 Gene3D Ribonuclease Inhibitor 179 813 IPR032675 -
Mtr3g0180 1214 Gene3D Ribonuclease Inhibitor 44 152 IPR032675 -
Mtr3g0180 1214 ProSiteProfiles Protein kinase domain profile. 916 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0180 1214 Gene3D - 636 693 - -
Mtr3g0180 1214 SUPERFAMILY L domain-like 691 816 - -
Mtr3g0180 1214 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 1199 - -
Mtr3g0180 1214 SMART LRR_typ_2 336 360 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 767 790 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 719 743 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 311 335 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 579 603 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 506 530 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 410 434 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 239 262 IPR003591 -
Mtr3g0180 1214 SMART LRR_typ_2 114 137 IPR003591 -
Mtr3g0180 1214 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 29 1199 - -
Mtr3g0180 1214 ProSitePatterns Protein kinases ATP-binding region signature. 922 945 IPR017441 GO:0005524
Mtr3g0180 1214 SMART serkin_6 916 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0180 1214 Pfam Leucine Rich repeats (2 copies) 313 349 IPR025875 -
Mtr3g0180 1214 SUPERFAMILY L domain-like 51 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0180 Mtr-Chr3 2029586 2033502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0180 46 1213 Receptor kinase-like Gene Family AT1G55610 61.369 0.0 1432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr3g0180 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0180 - - gmx:100779072 1659.43