Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0161 ATGGCAACAAAGTTTACCCTTGTTTTCCTTTTCTTGACTCTCCTCTCTATTGCAACTTCAACACCAACAAACTTCATCAAATCCTCATGTAGCACAACATCATACCCAACACTTTGTGTTGAATCTCTCTCTGTCTATGCAACAACAATCCAACAAGACCCTCATCAATTGGTCCAAACAGCTTTATCACTTAGCCTGAACAAAACTCAATCCACTAAAGGCTTTGTTACAAAGTGCAAAAGTTTCAAAGGTCTTAAACCAAGAGAATATGCTGCTCTTCATGATTGTGTTGAAGAAATCACTGATAGTGTTGATAGGCTTAGCCGTTCACTAAAAGAGCTTAAACTTTGCAAGATCCAAGGTGAGGATTTCAGTTGGCATATAAGCAATGTTGAGACATGGGTTAGCTCAGCTTTGACTGATGAAAGCACTTGTAGTGATGGATTTGGTGGAAAAGCACTTGATGGAAGAATGAAAGCCTCTATTAGATCAAGAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATTAATCAATATGCTACTAAGCACTAG 564 0.3794 MATKFTLVFLFLTLLSIATSTPTNFIKSSCSTTSYPTLCVESLSVYATTIQQDPHQLVQTALSLSLNKTQSTKGFVTKCKSFKGLKPREYAALHDCVEEITDSVDRLSRSLKELKLCKIQGEDFSWHISNVETWVSSALTDESTCSDGFGGKALDGRMKASIRSRMVNVAQVTSNALSLINQYATKH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0161 187 SMART PMEI_2 21 179 IPR006501 GO:0004857
Mtr3g0161 187 CDD PMEI-like_3 28 185 - -
Mtr3g0161 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 187 - -
Mtr3g0161 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 183 IPR035513 -
Mtr3g0161 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 183 IPR006501 GO:0004857
Mtr3g0161 187 Pfam Plant invertase/pectin methylesterase inhibitor 24 179 IPR006501 GO:0004857
Mtr3g0161 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 183 IPR035513 -
Mtr3g0161 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0161 Mtr-Chr3 1724793 1725619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0161 26 180 Carbohydrate Esterase AT3G14310 30.769 1.49e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0161 - - gmx:100305900 296.589