Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0160 ATGGCAACAAATGTCCTTCTTTTCCTTCTCTTAACTCTCCTCTCTATTGCAACTTCAACACCAACAAACTTCATCAAATCCTCATGTAGCACAACATCATACCCAACACTTTGTGTTGAATCTCTCTCTGTCTATGCAACAACAATCCAACAAGACCCTCATCAATTGGTCCAAACAGCTTTATCACTTAGCCTAAACAAAACTCAATCCACAAAAGGCTTTGTTACAAAGTGCAAAAAGTTTAAAGGTCTTAAACCAAGAGAATATGCTGCTCTTCATGATTGTGTTGAAGAAATTACTGATAGTGTTGATAGGCTTAGCCGTTCACTTAAGGAGCTTAAACTTTGCAAGATCAATGGTCAAGATTTCAATTGGCATATAAGTAATGTTCAAACATGGGTTAGCTCATCTATGACTGATGCAAGTACTTGTAGTGATGGCTTTGGTGGAAAAGCACTTGATGGAAGAATGAAAACCTCTATTAGATCAAGAATGGTTAATCTTGCTCAGGTTACTAGTAATGCTCTTTCACTCATTAATCAATATGGTACTAATCACTAG 561 0.3672 MATNVLLFLLLTLLSIATSTPTNFIKSSCSTTSYPTLCVESLSVYATTIQQDPHQLVQTALSLSLNKTQSTKGFVTKCKKFKGLKPREYAALHDCVEEITDSVDRLSRSLKELKLCKINGQDFNWHISNVQTWVSSSMTDASTCSDGFGGKALDGRMKTSIRSRMVNLAQVTSNALSLINQYGTNH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0160 186 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 185 - -
Mtr3g0160 186 Pfam Plant invertase/pectin methylesterase inhibitor 23 178 IPR006501 GO:0004857
Mtr3g0160 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 185 - -
Mtr3g0160 186 SMART PMEI_2 20 178 IPR006501 GO:0004857
Mtr3g0160 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 182 IPR006501 GO:0004857
Mtr3g0160 186 CDD PMEI-like_3 27 184 - -
Mtr3g0160 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 182 IPR035513 -
Mtr3g0160 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0160 Mtr-Chr3 1714851 1715654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0160 25 179 Carbohydrate Esterase AT3G14310 30.128 4.42e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0160 - - gmx:100305900 280.411