Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0159 ATGGAAGCCAACACTTTTGCAAGTTTTTCTTTAGGTCATGTTCTCAAATTTGCAATTTTGATTTTGCTAGCAATATCTAGCATCACTTCAGCATGTGAGGACAATTCTACAATCCCTACCAATTCCCCCAAAACAAACCTTTCATACACTTCCAATGCTCCCTCAAATTCCACCAACACCAATGATTTCAAAACCTATATAAAAAATTCATGCAATTCAACCACATATCCATATATATGTTACAAATCTTTATCTCCCTATGCTTCAACAATTGAGGCAGATCCTCTAAAATTATGCAACACTTCTCTCTCGGTTGCATTAAATGCGGCTCGCGATGCATCCTCCGCCATATCAAAGCTTCTAAACAACGATGAGAATAAATTGTCAAGCATTGGTGAAGAAGTTGTGCAAGATTGCCTTGGCAATGTGAAGGATTCAATAGAACAGTTGCAAGATTCTCTTGATGCCATGGCACATTTGGATGCTTATTTTGATAGAGAATTTCAGATTAGTAACATGAAGACTTGGGTTAGTTCAGCCATTACTAATGATCAAACTTGCTATGATGGGTTTGATGATATGAATGTGGATTCTACACTTGGGGACAAGATTAGAAGAAGAGTTTTGAATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTTATCAACAATAACATATATTAA 684 0.364 MEANTFASFSLGHVLKFAILILLAISSITSACEDNSTIPTNSPKTNLSYTSNAPSNSTNTNDFKTYIKNSCNSTTYPYICYKSLSPYASTIEADPLKLCNTSLSVALNAARDASSAISKLLNNDENKLSSIGEEVVQDCLGNVKDSIEQLQDSLDAMAHLDAYFDREFQISNMKTWVSSAITNDQTCYDGFDDMNVDSTLGDKIRRRVLNVARKTSNALYFINNNIY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0159 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 225 IPR035513 -
Mtr3g0159 227 CDD PMEI-like_3 70 224 - -
Mtr3g0159 227 Pfam Plant invertase/pectin methylesterase inhibitor 66 219 IPR006501 GO:0004857
Mtr3g0159 227 PANTHER PECTINESTERASE INHIBITOR 4 9 225 - -
Mtr3g0159 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 224 IPR035513 -
Mtr3g0159 227 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 224 IPR006501 GO:0004857
Mtr3g0159 227 SMART PMEI_2 62 221 IPR006501 GO:0004857
Mtr3g0159 227 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0159 Mtr-Chr3 1700418 1701418 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0159 20 224 Carbohydrate Esterase AT3G14310 23.301 9.20e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0159 - - gmx:100527443 271.937