Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0156 ATGGCAATCATTGGAAAAACATTGTTTATGCTCTTTTTCTTATCATCAATTTTCTCAATAGCCTCATCAAGAAAAGGACCTTCCTCAAGCAACATAGATTGGTGGTGCAATTTAACACCACATCCAAAGCCATGCAAACACTACACAACACAAATGAACAATCATTTCAAAATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAAACAAGCTCTTACCATGCAAAAAGAAGCACAAGAAAATTCTCAACAACAACAAAACTCATTTGTGCATAAAACGGTTCATGGTGATTGTTTGAAGCTATTTGAAAACACAATTTTTCATCTCAACCGTACACTTGAAGGCTTAAACAATGCTAGCAAAAATTGTTCACCAAATGATGCACAAACATGGCTAACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCGATTTCATTATGCAAACCAATGTCACTGAAATGATAAGGAACATCTTAGCCATCAATATGCATTTCCTGAAACATAGCAAAGAAACAGAAGAAGGGTCATTTCCAAATTGGTTTTCTGTGCATGAAAGGAAGCTTTTGCAGTCAAAGGGTCCAGTAAAGTACAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAGGCTGCTTTAAATGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTTAAGAAAGGTGTTTATAGAGAGAACATTGAGGTTGCTGTTCATAATGACAATATTATGCTGGTTGGTGATGGGATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCAGGTATTGATGGACTTCACTTCATTGCACGTGACATAACCTTCCAAAATACCGCCGGTCCACACAAGGGTCAAGCAGTGGCGCTAAGATCAGCCTCCGATCTCTCAGTTTTCTATCGGTGTGCCATATCAGGTTATCAAGACACTCTGATGGCTCATGCACAACGTCAATTTTATCGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAATGCCGCAGTGGTTTTCCAAAATTGTAACATTTTCGCAAGAAAACCTTTAGATGGTCAAGCTAACATGATCACAGCCCAAGGTCGAGGTGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGACAAGTACAAAACCTTCTTGGGCAGGCCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTCATGGACACTTTAGTAAGCCCCCTGGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAATAGAGTAAAATGGCCTGGTTATCATGTGATATCAAACCCTAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGACCAACATGGTTGGCTACAACTACTGTGCCATTTACATCTGGTCTTTGA 1584 0.3927 MAIIGKTLFMLFFLSSIFSIASSRKGPSSSNIDWWCNLTPHPKPCKHYTTQMNNHFKIKHRVEFREMLVQLALKQALTMQKEAQENSQQQQNSFVHKTVHGDCLKLFENTIFHLNRTLEGLNNASKNCSPNDAQTWLTTSLTNIETCKSGALELNAQDFDFIMQTNVTEMIRNILAINMHFLKHSKETEEGSFPNWFSVHERKLLQSKGPVKYNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHVISNPNEASKFTVAGLLAGPTWLATTTVPFTSGL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0156 527 PANTHER PECTINESTERASE 1 526 - -
Mtr3g0156 527 Pfam Pectinesterase 214 512 IPR000070 GO:0030599|GO:0042545
Mtr3g0156 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
Mtr3g0156 527 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
Mtr3g0156 527 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Mtr3g0156 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 178 IPR035513 -
Mtr3g0156 527 PANTHER PECTINESTERASE 1 526 - -
Mtr3g0156 527 CDD PMEI-like_3 34 183 - -
Mtr3g0156 527 Gene3D - 209 527 IPR012334 -
Mtr3g0156 527 Pfam Plant invertase/pectin methylesterase inhibitor 31 177 IPR006501 GO:0004857
Mtr3g0156 527 SUPERFAMILY Pectin lyase-like 211 526 IPR011050 -
Mtr3g0156 527 SMART PMEI_2 27 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0156 Mtr-Chr3 1655788 1658470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0156 29 527 Carbohydrate Esterase AT5G51500 55.882 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0156 K01051 - gmx:100806133 806.208