Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0151 ATGGACCTGAAGACAAATCATACTCCTCGCATTGCTGATACTGCAACCTTAACGAGGACAAGATCAAGGCTCGGTGCAGGCGCGCCTTCGAGTCTGTCATGCTCTCCTACAAATACTTCAACTTTTCTGCACGGTCCATCGCTAACGATTCCACGGAAGAAGATAGGAATTCTTGATGATGTTCGTTCTAATGGTTGGCTTGATGCAATGAGATCATCGTCTCCTACTCACAAGAAAATATCTATGGATATTGGTCATGGTGTTGCATCTTCTGAAGCTGATGCTGCTTATTTAACCTGGCTGCTAGAGTTTCCATCAGCAATTGGGGCCTTCGAACAAATTACTAATCTTGCTAAAGGCAAGAAAATAGCACTGTTTCTTGATTACGATGGGACTCTTTCGCCAATTGTTGACAATCCTGAGCGTGCTTTCATGTCCGAAAACATGCGTGCTGCGGTGAAAAATGTGGCAGAATATTTTCCAACTGCAATAATTAGCGGAAGAAGTCGTGAAAAGGTACATGAATTTGTTGGATTAACAGATCTCCATTATGCTGGTAGTCATGGAATGGACATAATTGGTCCTCTTAGACAGTCTATATCTGATAATCACCCTAACTGCATTAGGTCTACTGATAAGAAGGGTAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCTATGATCGATGAGGTCCGTAAGTTGCTCACTGAGTCTACAAAAGACATCAAAGGAGCAAAAATTGAGAACAACAAGTTTTGTGTGTCTGTACATTATCGTAATGTAGAGGAGGAGAGTTGGGATTTGGTGGCTCAACGCGTTTTTGATATTATGAAGGACTATCCACATTTACGATTAACTCATGGTCGGAAGGTTTTAGAGGTTCGACCAGTGATTGACTGGGATAAGGGAAAAGCTGTTACATTTTTGCTTGAATCACTTGGACTTAACGACGACGATGATGTGCTAGCTATATATATTGGTGATGATCGGACTGATGAAGATGCATTTAAGGTTTTGAGTGAGGTTAATAAAGGCTTTGGAATCTTAGTCTCTTCCGCTCCTAAAGAAAGCAACGCGGTTTACTCTCTTTGTGATCCTTCAGAGGTCATGGAATTTCTCAAGTCACTTGTGGTATGGAAATCAAGCTCTACAGTATAA 1167 0.4139 MDLKTNHTPRIADTATLTRTRSRLGAGAPSSLSCSPTNTSTFLHGPSLTIPRKKIGILDDVRSNGWLDAMRSSSPTHKKISMDIGHGVASSEADAAYLTWLLEFPSAIGAFEQITNLAKGKKIALFLDYDGTLSPIVDNPERAFMSENMRAAVKNVAEYFPTAIISGRSREKVHEFVGLTDLHYAGSHGMDIIGPLRQSISDNHPNCIRSTDKKGKEVNLFQPAAEFLPMIDEVRKLLTESTKDIKGAKIENNKFCVSVHYRNVEEESWDLVAQRVFDIMKDYPHLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNDDDDVLAIYIGDDRTDEDAFKVLSEVNKGFGILVSSAPKESNAVYSLCDPSEVMEFLKSLVVWKSSSTV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0151 388 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 388 IPR044651 GO:0004805|GO:0005992
Mtr3g0151 388 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Mtr3g0151 388 Gene3D - 123 214 IPR023214 -
Mtr3g0151 388 Gene3D - 220 387 IPR023214 -
Mtr3g0151 388 TIGRFAM T6PP: trehalose-phosphatase 120 380 IPR003337 GO:0003824|GO:0005992
Mtr3g0151 388 SUPERFAMILY HAD-like 124 381 IPR036412 -
Mtr3g0151 388 CDD HAD_TPP 124 374 - -
Mtr3g0151 388 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 388 - -
Mtr3g0151 388 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 125 342 IPR006379 -
Mtr3g0151 388 Pfam Trehalose-phosphatase 126 369 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0151 Mtr-Chr3 1613248 1618139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0151 119 379 Trehalose Biosynthesis Gene Families AT1G70290 26.786 8.69e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0151 K01087 - gmx:100819495 585.104