Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0135 ATGGATAGGATTCAAAGGATTCAAGAGGGAGATGAAAGTAAAAGGACTCGGCATTCATCGTCTTCGGTTGTAGCTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTTGTACAATGGGCACTTAACAAGTTTGTTCCAGAGGGAATGATTATCTTCAAGCTCATACATGTTCATGCTGTGGGAAATATGCTCCCAATTTCACAAGTGCGTGACGATGTAGCAGCTGCGTACAAAAAAGAAATAGAGTGTGAGACAAATCAAATGCTTCTACCTTTTAAGCAAATGTGTGAGCAGAGAAAGGTGCATGTAGAAGTTGTAGTGATTGAATCAGATGATGTGGCATCTGCGGTGGCAGAGGAAGTAACCAAGTATGCTGTAACGAAATTGGTCGTTGGAGCTTCAACCGGTGGCTTATTTAAAAGTAAACATAAGGGTATGTCTGCAAAAATCTCAGTATGCACTCCAAGATTTTGTACGGTTTATGCTGTTTCAAAAGGAAAGTTGTTGATACGGCCATCAGACGTGCAGATTGATGAAAGCATTACAGATGACACAAGTGAAATCAGTTTTTCCTCAAGCAGCTCATCGAACTACACTTCTACCACTCAGACAGACTCTGGCTCGGTTGCATCGTATGCTGCTTTACATTCCTCTTCCTTGGCAACACAACGATTTCAAGCTCTTTCAAGTATGAATCAGAACCTTCTAAGCACAAATCCTAGTTTGAATGAAACTAATCATTCTAGAGGTCAGTCCATTGATCTTGGAAGAGGTAACGTTGCTACAAGTTCTGCTAGAAACTCAGATTTTGATCGTGGTCTGAGTCGGGCCTCTAGTTTCAGAAGCATCGTTTCAGACACTGATACTTGGATTTATGATCAAATTTCTTTAAAGGATGCTCCACTAACTTCTAAACTTGCGTCACCTAATAGGCAGGAAAATTTTAACCTTGAGCTTGAAAAGTTGAGAATTGAACTAAGACATGCACAAGGAATGCATGCAGTAGCTCAAACTGAGAACATTGATGCATCACGAAAGCTTAATGAACTAAGCAAGAGGAGATCAGGAGAATCCATGAAAATGAAGGAAATTATTGCTAAGGAAGAGGTGGCGAAGGAATTAGCAAGACAAGAAATAGAGAAATATGAAGCTGCAGCAAGAGAAGCTTCGTATTTGAAAGAATGTGCTGAAAGAGAAGCTTCAGAAAGAAAAGAAACAGAATTGAAAGCTATTCGTGCTGCCAAGGAGAAAGATAAGCTAGAGGATGCTCTAAGTGGTTCCACGCCTCAGTACCGAAAGTTTACGTGGGATGAAATAGTTTCAGCTACTTCATCTTTCTCTGAAGATCTGAGAATCGGAATGGGTGCATATGGAATGGTGTATAAGTGCACTTTGCATCACACAACTGTTGCTGTTAAAGTTCTCCACTCTGCCGGAATCAGCCAAAGCAAGCAATTCCAGCAGGAGTTAGAGATATTGAGCAGAATCCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAGCTTGGAGGATAGACTATTTCAGAAAAACAGCACCACCCCAATCCGATGGTTTGATAGGTTTCGAGTAGCTTGGGAAATTGCGTCAGCTCTCTCCTTTCTTCACAGCTCAAAACCACAACCTATTATCCATCGCGACCTGAAACCTGCAAACATCTTGCTTGGTGGTAACCTTGTCAGCAAAATTGGTGATATTGGTCTTTCGACAGTCCTTAATTCAGATGAGTTATCTACCATGTATAAGGACACAGCGCCTGTTGGGACACTCAGCTACATCGATCCTGAGTATCAAAGAAGCGGTTTAATATCTACAAAATCTGATGTTTATGCTTTCGGATTAGTGATGTTACAGTTGTTGACAGCAAAACCGGCGACAGCACTTACTCATGTGGTTGAAACAGCAATCGAAGACGGTAATTTAACGGATATATTGGATCCAAAGGCAGGGTTATGGCCATTTCAAGAGACATTAGACTTAGCTAGATTAGCTTTGAGTTGTGCAGAGCTTAGGCGTAGAGACCGACCTGATTTGTTAGATCACGTGCTTCCAACGCTGGAGAGGTTGAAAGAAGTTGCTGATAGGGCTCATCATTCAGCTTCAATGGTTGCTATTAAACCCAAACCTCCAAACCATTTCATTTGCCCTATACTTCAGGATGTGATGGATGATCCTTGTGTCGCCGCAGATGGATATACGTATGATCGCAAAGCGATTGAAAAATGGCTTGAAGAGAAAGACAAATCACCAATGACAAACATACCTTTGCCTCATAAGATTCTAATTCCTAATTACACACTTCTATCAGCAATTTTGGAGTGGAAGTCCAAAGAAATATGA 2406 0.4119 MDRIQRIQEGDESKRTRHSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHAVGNMLPISQVRDDVAAAYKKEIECETNQMLLPFKQMCEQRKVHVEVVVIESDDVASAVAEEVTKYAVTKLVVGASTGGLFKSKHKGMSAKISVCTPRFCTVYAVSKGKLLIRPSDVQIDESITDDTSEISFSSSSSSNYTSTTQTDSGSVASYAALHSSSLATQRFQALSSMNQNLLSTNPSLNETNHSRGQSIDLGRGNVATSSARNSDFDRGLSRASSFRSIVSDTDTWIYDQISLKDAPLTSKLASPNRQENFNLELEKLRIELRHAQGMHAVAQTENIDASRKLNELSKRRSGESMKMKEIIAKEEVAKELARQEIEKYEAAAREASYLKECAEREASERKETELKAIRAAKEKDKLEDALSGSTPQYRKFTWDEIVSATSSFSEDLRIGMGAYGMVYKCTLHHTTVAVKVLHSAGISQSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDRLFQKNSTTPIRWFDRFRVAWEIASALSFLHSSKPQPIIHRDLKPANILLGGNLVSKIGDIGLSTVLNSDELSTMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVMLQLLTAKPATALTHVVETAIEDGNLTDILDPKAGLWPFQETLDLARLALSCAELRRRDRPDLLDHVLPTLERLKEVADRAHHSASMVAIKPKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEEKDKSPMTNIPLPHKILIPNYTLLSAILEWKSKEI* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0135 801 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 141 - -
Mtr3g0135 801 Pfam U-box domain 732 798 IPR003613 GO:0004842|GO:0016567
Mtr3g0135 801 SUPERFAMILY Protein kinase-like (PK-like) 429 701 IPR011009 -
Mtr3g0135 801 Coils Coil 313 333 - -
Mtr3g0135 801 SMART serkin_6 447 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0135 801 Gene3D HUPs 14 144 IPR014729 -
Mtr3g0135 801 MobiDBLite consensus disorder prediction 237 269 - -
Mtr3g0135 801 SUPERFAMILY RING/U-box 729 799 - -
Mtr3g0135 801 Coils Coil 366 400 - -
Mtr3g0135 801 CDD RING-Ubox_WDSUB1_like 735 775 - -
Mtr3g0135 801 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 19 797 - -
Mtr3g0135 801 Pfam Protein tyrosine and serine/threonine kinase 452 699 IPR001245 GO:0004672|GO:0006468
Mtr3g0135 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 801 IPR013083 -
Mtr3g0135 801 Gene3D Transferase(Phosphotransferase) domain 1 520 728 - -
Mtr3g0135 801 Coils Coil 404 424 - -
Mtr3g0135 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Mtr3g0135 801 Gene3D Phosphorylase Kinase; domain 1 416 519 - -
Mtr3g0135 801 ProSitePatterns Protein kinases ATP-binding region signature. 453 474 IPR017441 GO:0005524
Mtr3g0135 801 ProSiteProfiles U-box domain profile. 730 801 IPR003613 GO:0004842|GO:0016567
Mtr3g0135 801 SMART Ubox_2 734 796 IPR003613 GO:0004842|GO:0016567
Mtr3g0135 801 ProSiteProfiles Protein kinase domain profile. 447 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0135 801 PANTHER OS02G0152300 PROTEIN 19 797 - -
Mtr3g0135 801 CDD STK_N 23 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0135 Mtr-Chr3 1456434 1462059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0135 21 798 U-box Gene Family AT4G25160 52.000 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr3g0135 PK_Tyr_Ser-Thr 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0135 - - gsj:114409387 1201.04