Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0134 ATGAGATTATCTTCTTTTTTGGCTAAGATTTTGAGCCAACCACTGAACAAGTTCAAAACAAGTTATTTCATTGGAAGAGAGATGGATAGGGTTCAAGAGGCAGAAGAAAATAATAAATCTTCAGTTGTTGGTCTAGCAATCAAAGGTAACAAGAAAAGCAAATATGTTGTACAATGGGCACTTGATAAATTTGTTCATGAAGGGATAAGTATCTTCAAGCTTATACATGTCAGAGCTGTTATAACAGGAGTCCCAACACCAATGGGAGAAGTGCTACCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCTTTCAAAAGGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCATTTAAGAGTTTGTGTGAGCAGAGAAAGGTGCATGTAGATGTAGTAGTGATTGAATCAGATGATGTAGCAACTGCAGTAGCAGAGGAAGTAGCAAGGGAAGCTATTACCAAACTTGTCCTTGGAGCTTCATCTTCTGGTATATTTAGAAGCAAACATAAGGGCATTTCTGCAAAAATATCGGTATGCACTCCAAGATTTTGTACAGTTTATGCCGTTGCCAAAGGAAAATTGTCCATACGGCCGTCAGACACAGAGATTGATGGAAGCATTATAGATAATACCAGTGAAACCAGTTTTTCCTCCAGCAGCTCATCAAACTACACTTCCACCTCTCAGACAGATTCTGCCTCAGTCGCATCATGTAATGCTTTACATTCCTATGCCAAGGAAACACAACGAGTTAGAGCTCACTCGAGTATGGATCAGACCCTTCTAAGCACAAGTCCTAGTCTGAATGAAACTAATCATTTTAGAGGCCAGTCCCTAGATCTTGGAAGAAAGAATGCTGCTGCAAGTTCTTCCAGAAAATCAGATATCGACCATGCTCTAAGTCAGGCCTCTAGTTGCGGAAGCATTTCAGATACTGAATCTTTCTTTTATGAACAAAATCATGCCAAGGATGCGACACGAGTTAATAGACTTCCCCCATCAAATAGGCAGGAAAACATTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCACAAGGAATGCATGCAGTAGCTCAAAGTGAGAACGTTGATGCATCACAAAAGTTGAATGAACTAAACAAGAGAAGATTAGAAGAATCCATGAAAGTGAAGGAGATTATGGCTAAGGAGGAGATGGCCATGGAATTAGCGAATCAAGAAAGAGAGAAATATGAAGCTGCAGCAAGAGAAGCTACATATTTGAAAGAATGCGCTGAAAGAGAAGCTGCAGAACGAAAAGAAACAGAATTTAAAGCTATCCGTGCTGCCAAAGAGAAAGAAAAACTTGAGGATGCTCTGAGTGGTTCCACACCTCAGTACCGAATTTTTACATGGGATGAAATAGTTTCAGCTACTTCATCTTTCTCTGAAGATTTGAGACTTGGAATGGGTGCATATGGAATTGTGTATAAGTGCACTTTGCATCACACAACTGTTGCTGTTAAAGTTCTCCATTCTACTGGAAACTGCAAAAACAAGCAATTCCAACAAGAGTTAGAGATATTGAGCAGAATTCATCATCCAAATTTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAACTTGGAGGACAGATTACTCCAGAAAAACAGTAATAGTCCAATCCCATGGTTTAATAGGTTTCAAATAGCTTGGGAAGTTGCGTCAGCTCTTTCCTTTCTTCACAGCTCAAAGCCACAGCCAATCATCCATCGTGACTTGAAACCCGCAAACATCTTGCTTGATGGTAACCTTGTCAGCAAGATTGGTGATGTTGGCCTTTCTACAATCCTTGATTCAGATGAATTATCTGCCATGTATAAGGACACAGCGCCTGTTGGAACACTCAGCTACATTGATCCTGAGTATCAAAGGAGTGGTTTAATATCAACGAAATCAGATGTTTATGCTTTTGGATTAGTGATCTTACAGTTACTGACAGCAAAACCAGCCATAGCACTTACTCATATAGTTGAAACAGCTATTGATGGTGGTAATTTAGCAGATATATTGGATCCAAAAGCAGGATCATGGCCACTACAAGAGACGCTAGACATAGCTCGGTTAGCATTAGGCTGTGCAGAGATGCGGCGTAAAGATCGACCTGATTTGAATGACCATGTCCTACCAATGCTAGAGAGGCTGAAAGAAGTTGCTGATAAGGCTCAACATTCTGCTTCAATAGTTACTATAAAATCCAGACCTCCAAATCATTTTATATGCCCTATACTTCAGGATGTGATGGACGATCCTTGTGTTGCTGCAGACGGATATACATACGATCGTAATGCAATTGAAAAGTGGCTTGAGGAGAATGACAAATCACCAATGACAAATATGGTTTTACCTCATAAGCATCTAATTCCTAATTACACACTTCTATCTGCAATTTTGGAGTGGAAGACCTGA 2475 0.4004 MRLSSFLAKILSQPLNKFKTSYFIGREMDRVQEAEENNKSSVVGLAIKGNKKSKYVVQWALDKFVHEGISIFKLIHVRAVITGVPTPMGEVLPLSQVRNDVATAFKREVEWQTNQMLLPFKSLCEQRKVHVDVVVIESDDVATAVAEEVAREAITKLVLGASSSGIFRSKHKGISAKISVCTPRFCTVYAVAKGKLSIRPSDTEIDGSIIDNTSETSFSSSSSSNYTSTSQTDSASVASCNALHSYAKETQRVRAHSSMDQTLLSTSPSLNETNHFRGQSLDLGRKNAAASSSRKSDIDHALSQASSCGSISDTESFFYEQNHAKDATRVNRLPPSNRQENINLELEKLRIELRHAQGMHAVAQSENVDASQKLNELNKRRLEESMKVKEIMAKEEMAMELANQEREKYEAAAREATYLKECAEREAAERKETEFKAIRAAKEKEKLEDALSGSTPQYRIFTWDEIVSATSSFSEDLRLGMGAYGIVYKCTLHHTTVAVKVLHSTGNCKNKQFQQELEILSRIHHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLQKNSNSPIPWFNRFQIAWEVASALSFLHSSKPQPIIHRDLKPANILLDGNLVSKIGDVGLSTILDSDELSAMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVILQLLTAKPAIALTHIVETAIDGGNLADILDPKAGSWPLQETLDIARLALGCAEMRRKDRPDLNDHVLPMLERLKEVADKAQHSASIVTIKSRPPNHFICPILQDVMDDPCVAADGYTYDRNAIEKWLEENDKSPMTNMVLPHKHLIPNYTLLSAILEWKT* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0134 824 CDD STK_N 42 194 - -
Mtr3g0134 824 Pfam U-box domain 758 823 IPR003613 GO:0004842|GO:0016567
Mtr3g0134 824 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 39 823 - -
Mtr3g0134 824 ProSiteProfiles Protein kinase domain profile. 473 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0134 824 MobiDBLite consensus disorder prediction 256 295 - -
Mtr3g0134 824 Gene3D Transferase(Phosphotransferase) domain 1 546 756 - -
Mtr3g0134 824 SMART Ubox_2 760 822 IPR003613 GO:0004842|GO:0016567
Mtr3g0134 824 MobiDBLite consensus disorder prediction 251 295 - -
Mtr3g0134 824 Gene3D Phosphorylase Kinase; domain 1 451 545 - -
Mtr3g0134 824 SUPERFAMILY Protein kinase-like (PK-like) 454 728 IPR011009 -
Mtr3g0134 824 Gene3D HUPs 30 172 IPR014729 -
Mtr3g0134 824 ProSiteProfiles U-box domain profile. 756 824 IPR003613 GO:0004842|GO:0016567
Mtr3g0134 824 Coils Coil 392 426 - -
Mtr3g0134 824 CDD RING-Ubox_WDSUB1_like 761 801 - -
Mtr3g0134 824 Coils Coil 339 380 - -
Mtr3g0134 824 SMART serkin_6 473 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0134 824 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 169 - -
Mtr3g0134 824 Pfam Protein tyrosine and serine/threonine kinase 478 727 IPR001245 GO:0004672|GO:0006468
Mtr3g0134 824 SUPERFAMILY RING/U-box 755 823 - -
Mtr3g0134 824 MobiDBLite consensus disorder prediction 204 231 - -
Mtr3g0134 824 PANTHER OS02G0152300 PROTEIN 39 823 - -
Mtr3g0134 824 Coils Coil 428 450 - -
Mtr3g0134 824 ProSitePatterns Protein kinases ATP-binding region signature. 479 500 IPR017441 GO:0005524
Mtr3g0134 824 MobiDBLite consensus disorder prediction 206 231 - -
Mtr3g0134 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Mtr3g0134 824 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 757 824 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0134 Mtr-Chr3 1448188 1454895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0134 40 824 U-box Gene Family AT4G25160 52.747 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr3g0134 PK_Tyr_Ser-Thr 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0134 - - gsj:114409387 1173.3