Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0117 ATGCATCCCTTAACCCTCTTCACTCTCTTCTCCACCTTCATCCTCACCGCCTCCGGTGCCGGTAACATCCACCTCAACTTCCCTTACTTTACCACCGCAGACACCGCCACCAACCTCACCTTCCTCGGCGATTCATCTCTAACCACCAACGGCGTCGTTTCCTTAACTCAACCCACCACTTTCTCCACCGGTGCTATCATCTACAAACACCCCATTTCTCTCTTTGACATTTCAACAAACACCACGTCTTCATTCTCAACAACGTTCTCTTTCTCTATTACAAATTCAAATCCCACTTCCTTTGGTGATGGCATTGTTTTCTTCCTTTCCCCCAACAATCTCTCATCAACATCGTCACCAAGCCCATTTGGTCTTCCTACAAATTTTATTGCTGTTGAATTCGATACGCGATTCAACCCACATTTCAATGACCCAAATGAAAATCATATAGGTTTTGATATTGATACATTGAACTCTCTTAAAATTGTTGATCCAATTTTCAATGGGATTGATCTTAAGAGTGGTAACACTATCACTTCTTGGATTGATTACAAGACTGATCAGAATTTGCTTTCTGTTTTCTTGAGTTATTCTACTAAGAAGCCACATGATCCTATTCTTTCAGCTACCGTTGATCTTTCGGGGTATTTTCGCGATAATGAAGCTGTTTATGTTGGTTTTTCAGCTTCTGCTGAAAAAAGTACTGAGCTTCATCAAATTGAAAGATGGAGTTTTTACACTGTTGGGTTTGAGCCTGCAAGACCTAGGTTGCGTAGTCACAATGTTTCCGATAATTCTGTTGGTGTAAGTACCGGGAATGAGGTAAAAGTTCGTGGGTCGCGTTCTTCTTTTTCTTCGTCTTCGAAGAAAAAGTTTGGTTTTGGTTTTGCTGTTGCAGGTCCTGTTTTTTTCCGTGTTGTTTTTACTTTGTTGGGGTATTATTCTTTTATGAAATGGAAAGGTGTGAGAAAAGGGGTGTCGAAGAATTTTCAAACTGGGTTTGTTGCTTGTCCTAGGGAGTTTAGTTACAGAGAATTGAAATCGGCTACAAGAGAGTTTCATCCGAGTAGGATTGTTGGTCACGGTTCGTTTGGAACTTTGTATAAAGCGTTCTTTATATCGTCTGGAACCATTGCTGCAGTGAAAAGATCGAGGCATTCACATGAAGGAAAGACCGAGTTTCTCTCTGAATTGAACATCATTGCTGGTTTAAGGCACAAGAATTTGGCTCAGTTGTTGGGTTGGTGTGTTGAGAAAGGTGAGTTGCTTCTTGTTTATGATTTCATGCCTAATGGAAGCTTAGACAAGATGCTTTACAAAGAACCTGAGAGAGGGAAATTGTTGACTTGGTCTATTAGGTATAATATTGTTGTTGGTTTGGCTTCTGTATTGGTTTTTCATCAGGAATGTGAGCAAAGAGTGGTTCATAGAGATATTAAAACTGGGAATTTCAATGCTAGGTTAGGTGATTTTGGATTGGCTAAACTCATGGATCATGATAAGAGTCCTGTTTCAACTTTAACTGCTGGAACAATGGGATACCTTGCACCTGAATATCTTCAATATGGTAAAGCTACTGATAAGACTGATGTTTTCAGCTTTGGTGTGGTTGTGCTTGAAGTGGCTTGTGGGAAAAGGCCTATTGAAAGAGAGGGTCCAAAGATGATTAATTTGGTGGATTGGGTTTGGGGGTTGTATTATGAAGGGAAGATAATTGAGGCTGTTGATAAGAGGTTGAATGGTGAATTCGAGGAAGAGGAAATGAGGAAGCTTTTGTTGTTAGGGTTGAGCTGTGCTAATCCTGATAGTGCTGCAAGGCCTACAATGAGATGGGTTTTGCAGATTCTCAACAATGAAGCTATGCAATTTACTGTGCCAAAAGTAAAGCCAACCTTAACTTTCTCATCTGATTTACCATTGAGTATTCATGAGATTGTTTCTGATGATGATCTTGATTATGAAGAGTTCAATACTAGCCAGTCTATGTGTGAGATTAAAATTCACTGA 2007 0.4011 MHPLTLFTLFSTFILTASGAGNIHLNFPYFTTADTATNLTFLGDSSLTTNGVVSLTQPTTFSTGAIIYKHPISLFDISTNTTSSFSTTFSFSITNSNPTSFGDGIVFFLSPNNLSSTSSPSPFGLPTNFIAVEFDTRFNPHFNDPNENHIGFDIDTLNSLKIVDPIFNGIDLKSGNTITSWIDYKTDQNLLSVFLSYSTKKPHDPILSATVDLSGYFRDNEAVYVGFSASAEKSTELHQIERWSFYTVGFEPARPRLRSHNVSDNSVGVSTGNEVKVRGSRSSFSSSSKKKFGFGFAVAGPVFFRVVFTLLGYYSFMKWKGVRKGVSKNFQTGFVACPREFSYRELKSATREFHPSRIVGHGSFGTLYKAFFISSGTIAAVKRSRHSHEGKTEFLSELNIIAGLRHKNLAQLLGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLTWSIRYNIVVGLASVLVFHQECEQRVVHRDIKTGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGKRPIEREGPKMINLVDWVWGLYYEGKIIEAVDKRLNGEFEEEEMRKLLLLGLSCANPDSAARPTMRWVLQILNNEAMQFTVPKVKPTLTFSSDLPLSIHEIVSDDDLDYEEFNTSQSMCEIKIH* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0117 668 PANTHER - 33 636 - -
Mtr3g0117 668 Gene3D - 23 248 - -
Mtr3g0117 668 Gene3D Phosphorylase Kinase; domain 1 319 428 - -
Mtr3g0117 668 Pfam Protein kinase domain 354 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0117 668 SUPERFAMILY Protein kinase-like (PK-like) 337 638 IPR011009 -
Mtr3g0117 668 CDD lectin_legume_LecRK_Arcelin_ConA 23 249 IPR001220 GO:0030246
Mtr3g0117 668 SMART serkin_6 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0117 668 Pfam Legume lectin domain 25 252 IPR001220 GO:0030246
Mtr3g0117 668 Gene3D Transferase(Phosphotransferase) domain 1 429 629 - -
Mtr3g0117 668 CDD STKc_IRAK 359 618 - -
Mtr3g0117 668 ProSiteProfiles Protein kinase domain profile. 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0117 668 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 33 636 - -
Mtr3g0117 668 ProSitePatterns Legume lectins beta-chain signature. 130 136 IPR019825 -
Mtr3g0117 668 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Mtr3g0117 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 247 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0117 Mtr-Chr3 1274388 1276728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0117 6 650 Receptor kinase-like Gene Family AT5G55830 55.036 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr3g0117 Pkinase 9.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0117 - - adu:107496163 816.994