Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0102 ATGACCAATACCCTTCCTATCATAATGCTTTTAATTATTTCCAATTTATTGTTCTTCTTCTCTCAATTATCAACCGCAATTGATACAATAACCCAATTCCAATCTCTTGATGATGGTAACACTTTGGTTTCTAATGATGGAACCTTTGAGTTAGGCTTTTTCACACCAGGTAGTTCAACAAATCGCTACGTGGGAATATGGTACAAAAATATCCCAAAAAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACACCTCCAACTCAACCATGTTGATCATGAGCAATGATGGAAACCTTGAAATACTTACCAACAACAATCAAACACTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCAACTACAAGTTCTCATGTTGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGCCAACAACAATACTGATCAACAAAGTAATAATTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCAGACATGAAGCTTGGATGGGACCTAAAAACCGGTCTTAATCGTCAATTAACTTCATGGAAAAATTGGGATGATCCGTCTTCGGGAGATTTTACTTGGGCTATTGTCCTTCGTAGTAATCCAGAAATTGTATTGAAAAAAGGATCAGTTGAGATTCATAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGTGGAGCACCCGCGGTGACTGTTACTCAAATTGTCGAAACAAAATTTGTGAACAATACAAATGAAGTTTACTACACATATAGTCTTGTAAACAAGAGTAATGTTTCAATAACTTATTTGAACCAAACACTTGAGAAGCGTCAACGCATTACATGGATTCCAGAAGATAATGATTGGAGGGTTTATGAGGAAGTACCAAGAGATGATTGTGATGCCTATAATCCTTGTGGACCTTATGGAAAATGTATTCCTAATGAGTCTCCAATTTGTCAATGTTTAGAAGGGTTTGAACCTAAATCGCCACAAAATTGGGACACATTTAATTGGACACAAGGATGTGTGCGAAAAGGCGAAGAAACATGGAATTGTGGTGTGAATGATGGTTTTGGAACATTTTCTAGTTTGAAATTGCCAGAAACAACACATGCTTGGGTTGATGGTAATATGACACTTGAGAATTGTAAGAACAAATGCTTGGAAAATTGTTCTTGCATGGCTTATTCAAACTTAGATGTTAGGGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATCGGTTTGAAACAAGTTTCATCAGTTCAACAAGATCTTTATGTTCGAATGGATGCTTCCACAGTAGATCCGAATGGAGATGTTTCTGGTGGAAATAAGAACAATCATACTTTGGTAATTGCAATCACTGTTCCGTTGGTCATTGTTTTGTTACTGGTGGTCATAGTCTTCTACGTTTACAAGAGAAAAAGAAAGCAAAGAGGTGTGGAAGATAAATCAGAGAATATTAATTTACCCGAAAAGAAAGATGAAGACGAACAAGATTTTGAGCTTCCATTCTTCAATCTGTCTACAATAATTGATGCCACCAATGACTTCTCCAATGATAACAAGCTTGGAGAAGGTGGTTTTGGACCGGTATATAAGGGTACACTTGTTCTAGACAGACGAGAGATTGCCGTCAAAAGGCTTTCAGGAAGTTCAAAACAAGGAACAAGAGAATTTAAAAATGAAGTTATTTTATGTTCGAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGTTGTTGTATTCAAGGAGAAGAGAAAATGCTTATCTATGAATATATGCCGAACAGAAGCTTAGATTCATTTCTTTTTGATCAAGCTCAGAAGAAACTTTTAGATTGGTCCAAGCGCTTTAACATCATATGTGGAATCGCTCGTGGACTTATTTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAACATTTTGCTAGATAATGATATGAACCCGAAAATATCAGATTTTGGCTTGGCAAAAATTTGTGGTGATGATCAAGTTGAGGGGAATACAAACAGAGTAGTTGGGACACATGGTTATATGGCTCCCGAGTATGCCATTGATGGGTTATTCTCCATAAAATCCGATGTATTTAGCTTTGGCATATTACTGCTAGAGATTGTAAGTGGAAGGAAAAATAAAGGGCTTTCGTATCCAAGCGACAAACACAATCTTGTTGGGCATGCTTGGAGGTTGTGGAAAGAAGGAAACTCAAAAGAATTGATTGAGGATTGTTTCGGGGACTCATACATTCTATCTGAAGCTTTACGTTGCATACAAGTTGGTCTTTTATGTCTACAACATCATCCAAATGACAGGCCTAATATGGTTTCAGTGCTTGCGATGTTGACGAATGAAACTGTTTTAGCTCAACCAAAGGAACCTGGTTTCGTAATACAAATGGTCTCTACTGAAAGAGAATCTACAACGGAAAACTTAATTTCTTCGTCCATCAATGAAGTCACTATTTCATTATTGGATGTCAGATGA 2529 0.3673 MTNTLPIIMLLIISNLLFFFSQLSTAIDTITQFQSLDDGNTLVSNDGTFELGFFTPGSSTNRYVGIWYKNIPKRRIVWVANRDNPIKDNTSNSTMLIMSNDGNLEILTNNNQTLVWSTNITTQSLSTTSSHVAQLLDNGNFVIKANNNTDQQSNNFLWQGFDFPCDTLLPDMKLGWDLKTGLNRQLTSWKNWDDPSSGDFTWAIVLRSNPEIVLKKGSVEIHRSGPWNGVGFSGAPAVTVTQIVETKFVNNTNEVYYTYSLVNKSNVSITYLNQTLEKRQRITWIPEDNDWRVYEEVPRDDCDAYNPCGPYGKCIPNESPICQCLEGFEPKSPQNWDTFNWTQGCVRKGEETWNCGVNDGFGTFSSLKLPETTHAWVDGNMTLENCKNKCLENCSCMAYSNLDVRGDGSGCSIWFGDLIGLKQVSSVQQDLYVRMDASTVDPNGDVSGGNKNNHTLVIAITVPLVIVLLLVVIVFYVYKRKRKQRGVEDKSENINLPEKKDEDEQDFELPFFNLSTIIDATNDFSNDNKLGEGGFGPVYKGTLVLDRREIAVKRLSGSSKQGTREFKNEVILCSKLQHRNLVKVLGCCIQGEEKMLIYEYMPNRSLDSFLFDQAQKKLLDWSKRFNIICGIARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNPKISDFGLAKICGDDQVEGNTNRVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGRKNKGLSYPSDKHNLVGHAWRLWKEGNSKELIEDCFGDSYILSEALRCIQVGLLCLQHHPNDRPNMVSVLAMLTNETVLAQPKEPGFVIQMVSTERESTTENLISSSINEVTISLLDVR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0102 842 CDD PAN_AP_plant 354 434 - -
Mtr3g0102 842 PIRSF SRK 1 842 IPR024171 GO:0004674
Mtr3g0102 842 Pfam D-mannose binding lectin 76 190 IPR001480 -
Mtr3g0102 842 ProSiteProfiles EGF-like domain profile. 298 334 IPR000742 -
Mtr3g0102 842 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Mtr3g0102 842 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0102 842 Gene3D - 21 160 IPR036426 -
Mtr3g0102 842 CDD B_lectin 34 164 IPR001480 -
Mtr3g0102 842 Pfam Domain of unknown function (DUF3403) 797 842 IPR021820 GO:0004674
Mtr3g0102 842 ProSiteProfiles PAN/Apple domain profile. 355 437 IPR003609 -
Mtr3g0102 842 Gene3D Transferase(Phosphotransferase) domain 1 601 807 - -
Mtr3g0102 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 835 - -
Mtr3g0102 842 Gene3D Phosphorylase Kinase; domain 1 485 600 - -
Mtr3g0102 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Mtr3g0102 842 SMART blect_4 33 164 IPR001480 -
Mtr3g0102 842 SUPERFAMILY Protein kinase-like (PK-like) 505 818 IPR011009 -
Mtr3g0102 842 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 35 835 - -
Mtr3g0102 842 SMART ntp_6 356 435 IPR003609 -
Mtr3g0102 842 Gene3D Hepatocyte Growth Factor 351 434 - -
Mtr3g0102 842 Pfam PAN-like domain 355 419 IPR003609 -
Mtr3g0102 842 CDD STKc_IRAK 530 798 - -
Mtr3g0102 842 Pfam S-locus glycoprotein domain 223 332 IPR000858 GO:0048544
Mtr3g0102 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 195 IPR036426 -
Mtr3g0102 842 SMART serkin_6 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0102 842 ProSiteProfiles Bulb-type lectin domain profile. 27 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0102 Mtr-Chr3 1153965 1159302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0102 456 821 Receptor kinase-like Gene Family AT4G23190 51.058 6.38e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0102 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0102 - - mtr:MTR_3g007630 1389.4