Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0101 ATGTGTGTCTGCCTCAAACTCAATCAATGCAAAATGACCAATATTCTTCCTATGATATTGTTTGTTATTCTTAGTCTCCTGTTGTTCTTCTTTCAATTATCTACTTCAATTGATACCATCACCCAATTTCAATCTCTTCATGATGGCAACACTTTGGTTTCTAATGATGGAACCTTTGAGTTAGGATTTTTCACACCAGGTAGTTCCACAAATCGCTATGTGGGAATATGGTACAAAAATATGCCTAATAGAATAGTTTGGGTTGCAAACCGTGATGATCCAATCAAAGACAACACCTCCAACTCAACCATGTTGATCATGAGCAATGATGGAAACCTTGAAATACTTACCAACAACAATCAAACACTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCAACTACAAGTTCTCATGTTGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGCCAACAACAATACTGATCAACAAAGTAATAATTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCAGACATGAAGCTTGGATGGGACCTAAAAACCGGTCTTAATCGTCAATTAACTTCATGGAAAAGTTGGGACGATCCATCTTCGGGAGATTTAACTTGGGGTATTGTCCTTAGTAGTAATCCAGAAGTTGTATTGAAAAAAGGATCAGTTGAGATTCATAGAACTGGCCCTTGGAATGGAGTTGGATTTAGTGGAGCACCTGTGGAGATTGTTACTTCAATTGTTGTAATTACAACGTCGGTGAACAATTCAAATGAAGTTTATTACATATATAGTCTTGTAAACAAGAGTAATGTTTCAATAACTTATTTGAACCAAACAACTAGTCATCGCGAACGTGTTAATTGGATTCCAGAAGACGATACTTGGAGTGTTATTGAGTCGTTGCCAAAAGATGATTGTGATGTCTATAATCGTTGTGGCCCTTATGGAAATTGCGTTCATAACGAGTCTCCAATTTGCCAATGTTTAGATGGGTTTGAGCCTAAATCGCCAAAAAATTGGGACGCATCAAATTGGACACAAGGATGTGTGCGCAAAGGTGACGAAGATTGGAGATGTGGAGTGAATGATAGTTTTGTAAGATTTTATGGATTGAAATTGCCAGATACATCACATACTTGGGTTGATGCAAATATGACACTTGAGAATTGTAAGAATAAATGCTTGGAAGATTGTTCTTGCATGGCTTATTCAAACTTGGATGTGGCTGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATAGACTTGAAACAGATTTCATCATTCCAACAATATCTATATATTCGAATGGATGCTTCCACAGTAGATTCAAATGGAGATGTTTCTGGTGGGAAGAAAAATCATACATTGGCAATTGCAGTCACTATTCCTTTGATCATCATTTTACTGCTGGTGATCATAGTCTTCTACGTTTACAAGAGAAAAAGAAAGCAAAGAGATAATTCAGAGATGAACACTTTAACCGAAATAAAATATGAAGACCAACAAGATTTTGAGCTTCCTTTGTTCAATATTTCTACAATGATAAGTGCCACAAATGACTTTTCGAACTATAACAAACTTGGAGAAGGTGGCTTTGGACCAGTATATAAGGGTACACTAGCTACAGATGGGCAAGAGATTGCCGTCAAAAGGCTTTCAGGAAGTTCAAAACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATTCATTTCTTTTTGATCCAGCTCAAAAGAAACTTTTAGATTGGTTTAAGCGCTTCAACATCATTTGTGGAGTTGCTCGTGGACTGATTTATCTTCATCAAGATTCTAGATTGAGGATCATACATCGAGATCTAAAACCAAGTAATATTTTATTAGACAATGATATGAATGCCAAAATATCAGATTTTGGCTTGGCAAAAATTTGTGGGGATGATCAAGTTGAGGGGAATACAAAAAGAGTAGTTGGAACACATGGTTATATGGCTCCAGAATACGCCATTGATGGACTATTTTCTACAAAATCTGATGTATTTAGCTTTGGTGTATTATTACTAGAGATTGTAAGTGGACAGAAAAATAAAGGACTTACATTTCCAAGCAACAACCATAATCTTGTTGGGCATGCTTGGAGGTTATGGAAAGAGGGAAATTCGGAAGAATTGATTGATGATTGTCTAAGGGACTCATATATTCCATCTGAAGCTTTAAGATGCATACAAGTTGGTCTTTTATGTCTACAACTTCATCCAAATGATAGACCAAATATGACATATGTGCTTGCGATGTTGACAAATGAATCTGTTTTAGCCCAACCAAAGGAACCTGGTTTCATAATGCAAAGGGTCTCTAATGAGGGAGAATCTACAACGAAGTCTTTCTCAATCAATGAGGTCACTATTTCGTTAATAGGTGCTAGATGA 2538 0.3605 MCVCLKLNQCKMTNILPMILFVILSLLLFFFQLSTSIDTITQFQSLHDGNTLVSNDGTFELGFFTPGSSTNRYVGIWYKNMPNRIVWVANRDDPIKDNTSNSTMLIMSNDGNLEILTNNNQTLVWSTNITTQSLSTTSSHVAQLLDNGNFVIKANNNTDQQSNNFLWQGFDFPCDTLLPDMKLGWDLKTGLNRQLTSWKSWDDPSSGDLTWGIVLSSNPEVVLKKGSVEIHRTGPWNGVGFSGAPVEIVTSIVVITTSVNNSNEVYYIYSLVNKSNVSITYLNQTTSHRERVNWIPEDDTWSVIESLPKDDCDVYNRCGPYGNCVHNESPICQCLDGFEPKSPKNWDASNWTQGCVRKGDEDWRCGVNDSFVRFYGLKLPDTSHTWVDANMTLENCKNKCLEDCSCMAYSNLDVAGDGSGCSIWFGDLIDLKQISSFQQYLYIRMDASTVDSNGDVSGGKKNHTLAIAVTIPLIIILLLVIIVFYVYKRKRKQRDNSEMNTLTEIKYEDQQDFELPLFNISTMISATNDFSNYNKLGEGGFGPVYKGTLATDGQEIAVKRLSGSSKQGSKEFKNEVILCAKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFLFDPAQKKLLDWFKRFNIICGVARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNAKISDFGLAKICGDDQVEGNTKRVVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGQKNKGLTFPSNNHNLVGHAWRLWKEGNSEELIDDCLRDSYIPSEALRCIQVGLLCLQLHPNDRPNMTYVLAMLTNESVLAQPKEPGFIMQRVSNEGESTTKSFSINEVTISLIGAR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0101 845 Gene3D Transferase(Phosphotransferase) domain 1 607 814 - -
Mtr3g0101 845 CDD STKc_IRAK 536 804 - -
Mtr3g0101 845 Pfam D-mannose binding lectin 85 199 IPR001480 -
Mtr3g0101 845 Gene3D Hepatocyte Growth Factor 363 444 - -
Mtr3g0101 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 839 - -
Mtr3g0101 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Mtr3g0101 845 ProSiteProfiles PAN/Apple domain profile. 365 447 IPR003609 -
Mtr3g0101 845 ProSiteProfiles Bulb-type lectin domain profile. 37 165 IPR001480 -
Mtr3g0101 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 204 IPR036426 -
Mtr3g0101 845 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 45 839 - -
Mtr3g0101 845 Gene3D Phosphorylase Kinase; domain 1 487 606 - -
Mtr3g0101 845 Pfam Protein tyrosine and serine/threonine kinase 533 799 IPR001245 GO:0004672|GO:0006468
Mtr3g0101 845 ProSiteProfiles EGF-like domain profile. 308 344 IPR000742 -
Mtr3g0101 845 ProSiteProfiles Protein kinase domain profile. 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0101 845 CDD PAN_AP_plant 365 444 - -
Mtr3g0101 845 PIRSF SRK 9 845 IPR024171 GO:0004674
Mtr3g0101 845 CDD B_lectin 44 173 IPR001480 -
Mtr3g0101 845 Pfam S-locus glycoprotein domain 232 342 IPR000858 GO:0048544
Mtr3g0101 845 SUPERFAMILY Protein kinase-like (PK-like) 512 823 IPR011009 -
Mtr3g0101 845 SMART ntp_6 366 445 IPR003609 -
Mtr3g0101 845 SMART serkin_6 530 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0101 845 Pfam PAN-like domain 365 431 IPR003609 -
Mtr3g0101 845 Gene3D - 32 169 IPR036426 -
Mtr3g0101 845 Pfam Domain of unknown function (DUF3403) 803 845 IPR021820 GO:0004674
Mtr3g0101 845 SMART blect_4 43 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0101 Mtr-Chr3 1137453 1142607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0101 462 819 Receptor kinase-like Gene Family AT4G23230 53.333 1.13e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0101 PK_Tyr_Ser-Thr 7.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0101 - - mtr:MTR_3g007630 1617.44