Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0100 ATGTGTGTCTGCATCAAATTCATTCAATGCAAAATGGCCAATATTCTTCCTATGATATTGTTTGTTATTCTTAATCTCATATTGTTCTTCTTTCAATTATCTACCTCAATTGATACCATCACCCAATTTCAATCTCTTAATGATGGCAACACTTTGGTTTCTAATGATGGAACCTTTGAGTTAGGCTTTTTCACACCAGGTAGTTCAACAAATCGCTATGTGGGAATATGGTACAAAAATATCCCAAAAAGAAGAATAGTTTGGGTTGCAAACCGTGATGATCCAATCAAGGACAACAACTCCAACTCAACCATGTTGATCATGAGCAAAGAGGGAAACCTTGAACTACTTACCAACAACAATCAAACACTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCAACTACAAGTTCTCATGTTGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGCCAACAACAATACTGATCAACAAAGTAATAATTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGGCAGGCATGAAGCATGGATGGGACTTAAAAACCGGTCTTAATCGTCAATTAACTTCTTGGAAAAATTGGGACGATCCATCATCGGGAGATTTAACATGGGGTATTGTCCTTCATAGTAATCCAGAAATTGTATTGAAAAAAGGATCAGTTGAAATTCACAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGTGGAGCACCTATGGAGATTATTACGTCAAGTGTTATAGCTACAACACCTGTGATCAATTCAAATGAAGTTTATTTCACATATAGTCTTGTAAACAAGAGTATGGTTTCAATAACTTATTTGAACCAAACGCTTAGTCTTCATGAACGCGTTATATGGAGTCCAGAGGACAACACTTGGAGCGATATTCAGTCAGTACCAAAAAATGATTGTGATGTCTATAATCGTTGCGGCCCTTATGGAAATTGCATTCATAACCCGTCTCCAATTTGCCAATGTTTAGATGGGTTTGAGCCTAAATCACCACAAAATTGGTACGCATCAAATTGGACACAAGGATGTGTGCGCAAAGGTGAAGAAACATGGAATTGTGGTGTGAATGATCGTTTTAGAACATTTTCTGGATTGAAATTGCCAGATACAACACATACTTGGGTTGATGCTAATATGACACTTGAGAATTGTAAGAATAAATGCTTGGAAGATTGTTCTTGTATGGCTTATTCAAACTTAAATGTGAGTGATGGTAGTGGATGTTCCATATGGTTTGGTGATCTTATAGACTTAAGACAGATTTTAACATTCCAACAATATCTATATATTCGAATGGATGCTTCCACAGTAGATTCAAGTGGAGATGTTTCTAGTGGGAAGAAAAATCATACTTTGGCAATTGCAGTTACTATTCCGTTGGTCATCATTTTGCTACTGGGGATCATAGTCTTCTATGTTTACATGAGAAAAAGAAAGCAAAGAGATAATGCAGAGATCAACACCTTAACCGAAGAGAGAGATGAAGACCAACAAGATTTTGAGCTTCCTTTCTTCAATATTTCTACAATGATAAGTGCCACAAATCACTTTTCAGACTATAATAAACTTGGAGAAGGTGGCTTTGGACCAGTATATAAGGGTACACTAGCTATGGATGGGCGAGAGATTGCCGTCAAAAGGCTTTCAGGAAGTTCAAAACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATGCATTTCTTTTTGATCCAGCTCAAAAGAAACTTCTAGATTGGTTTAAGCGCTTCAACATTGTTTGTGGAATTGCCCGTGGACTGATTTATCTTCATCAAGATTCTAGATTGAGGATCATACATCGAGATCTAAAACCAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATATCAGATTTTGGCTTGGCAAAAATTTGTGGGGATGATCAAGTTGAGGGGAATACAAACAGAGTAGTTGGAACACATGGTTATATGGCTCCAGAATATGCCATTGATGGACTATTCTCCACAAAATCTGATGTATTTAGCTTTGGCGTATTATTGCTAGAGATTGTAAGTGGACATAAAAATAAAGGACTTACATTTCAGAACAACAACTATAATCTTGTTGGACATGCTTGGAGGTTATGGAAAGAGGGAAATTCAAAAGAATTGATTGATGATTGTCTAAAGGACTCATATATTCCATCTGAAGCTTTAAGATGCATACAAGTTGGTCTTTTATGTCTACAACTTCATCCAAATGATAGACCAAATATGACATATGTGCTTGCGATGTTGACGAATGAAAGTGTTTTAGCCCAACCAAAGGAACCTGGTTTCATAATACAAAGGGTCTCTAATGAGGGAGAATCTACAACGAAGCCTTTCTCAATGAATGAGGTTACTATTTCGGTAATAGATGCTAGATGA 2538 0.3601 MCVCIKFIQCKMANILPMILFVILNLILFFFQLSTSIDTITQFQSLNDGNTLVSNDGTFELGFFTPGSSTNRYVGIWYKNIPKRRIVWVANRDDPIKDNNSNSTMLIMSKEGNLELLTNNNQTLVWSTNITTQSLSTTSSHVAQLLDNGNFVIKANNNTDQQSNNFLWQGFDFPCDTLLAGMKHGWDLKTGLNRQLTSWKNWDDPSSGDLTWGIVLHSNPEIVLKKGSVEIHRSGPWNGVGFSGAPMEIITSSVIATTPVINSNEVYFTYSLVNKSMVSITYLNQTLSLHERVIWSPEDNTWSDIQSVPKNDCDVYNRCGPYGNCIHNPSPICQCLDGFEPKSPQNWYASNWTQGCVRKGEETWNCGVNDRFRTFSGLKLPDTTHTWVDANMTLENCKNKCLEDCSCMAYSNLNVSDGSGCSIWFGDLIDLRQILTFQQYLYIRMDASTVDSSGDVSSGKKNHTLAIAVTIPLVIILLLGIIVFYVYMRKRKQRDNAEINTLTEERDEDQQDFELPFFNISTMISATNHFSDYNKLGEGGFGPVYKGTLAMDGREIAVKRLSGSSKQGSKEFKNEVILCAKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDAFLFDPAQKKLLDWFKRFNIVCGIARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNPKISDFGLAKICGDDQVEGNTNRVVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGHKNKGLTFQNNNYNLVGHAWRLWKEGNSKELIDDCLKDSYIPSEALRCIQVGLLCLQLHPNDRPNMTYVLAMLTNESVLAQPKEPGFIIQRVSNEGESTTKPFSMNEVTISVIDAR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0100 845 Coils Coil 492 512 - -
Mtr3g0100 845 Pfam PAN-like domain 366 431 IPR003609 -
Mtr3g0100 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 205 IPR036426 -
Mtr3g0100 845 Gene3D Hepatocyte Growth Factor 362 444 - -
Mtr3g0100 845 CDD STKc_IRAK 536 804 - -
Mtr3g0100 845 Pfam S-locus glycoprotein domain 233 343 IPR000858 GO:0048544
Mtr3g0100 845 Gene3D Transferase(Phosphotransferase) domain 1 607 813 - -
Mtr3g0100 845 CDD PAN_AP_plant 365 444 - -
Mtr3g0100 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 839 - -
Mtr3g0100 845 PIRSF SRK 9 845 IPR024171 GO:0004674
Mtr3g0100 845 SMART blect_4 43 174 IPR001480 -
Mtr3g0100 845 ProSiteProfiles PAN/Apple domain profile. 366 447 IPR003609 -
Mtr3g0100 845 Pfam D-mannose binding lectin 86 200 IPR001480 -
Mtr3g0100 845 Pfam Protein kinase domain 531 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0100 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Mtr3g0100 845 SUPERFAMILY Protein kinase-like (PK-like) 511 802 IPR011009 -
Mtr3g0100 845 Gene3D Phosphorylase Kinase; domain 1 489 606 - -
Mtr3g0100 845 Pfam Domain of unknown function (DUF3403) 803 845 IPR021820 GO:0004674
Mtr3g0100 845 SMART serkin_6 530 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0100 845 CDD B_lectin 44 174 IPR001480 -
Mtr3g0100 845 ProSiteProfiles Protein kinase domain profile. 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0100 845 ProSiteProfiles Bulb-type lectin domain profile. 37 166 IPR001480 -
Mtr3g0100 845 SMART ntp_6 367 445 IPR003609 -
Mtr3g0100 845 Gene3D - 32 170 IPR036426 -
Mtr3g0100 845 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 45 839 - -
Mtr3g0100 845 ProSiteProfiles EGF-like domain profile. 309 345 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0100 Mtr-Chr3 1121805 1129122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0100 462 819 Receptor kinase-like Gene Family AT4G23230 53.203 9.74e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0100 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0100 - - mtr:MTR_3g007630 1466.44