Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0099 ATGACCAATATTCTTTCTATGATATTGTTTGTTATTCTTAATCTCTTGTTCTTTTTTAAATTATCTACCGCAATTGATACAATCACCCAATTTCAATCTCTTGATGATGGCAACACCTTGGTTTCTAATGACGGAACCTTTGAGTTAGGCTTTTTCACACCAGGTAGTTCAACAAATCGCTATGTGGGAATATGGTACAAAAACATCCCAAAAAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAATTCCAACTCAACCATGTTGATCATAAGCAACGAAGGAAACCTAGTACTACTTTCCAACAACAACCAAACACTTGTTTGGTCAACAAACATCACAACCCGATCTTTGTCAACTACAAGTTCTCATGTTGCTCAACTATTAGACAATGGAAACTTTGTAATCAAAGCCAACAACAATACTGATCAACAAAGTAATAATTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCAGACATGAAGCTTGGATGGGACCTAAAAATTGGTCTTAATCGTCCATTAACTTCTTGGAAAAATTGGGACGATCCATCTTCGGGAGATTTAACTTGGGGTATTGTCCTTCGTAGTAATCCAGAAATTGTTTTGAAAAGAGGATCAGTTGAAATTCATAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGTGGAGCGCCTATGGAGATTGTTACATCAACTGTTGTTGTTGCAAGATCTGTGAACAATTCAAATGAGGTTTATTACTCATATAGTCTTGTAAACAAGAGTAATGTTTCAATAACTTATTTGAACCAAACGCTTAGTCTTCACGAACGCATTATATGGAGTCCAGAGGACAATACTTGGAGTGGTATTGAGTCAGTACCAAAAGATGATTGTGATGTCTATAATCATTGTGGCCCATATGGAAATTGCATTTATAACCCGTCTCCAATTTGTCAATGTTTAGATGGGTTTGAGCCTAAATCACCACAAAATTGGGACGCATCAAATTGGACACAAGGATGTGTGCGCAAAGGCGAAGAAACATGGAATTGTGGTGTGAATGATGGTTTTGGAACATTTTCTGGATTGAAATTGCCAGATACAACACATACTTGGGTTGATGCTAATATGACACTTGAGAATTGTAAAAATAAATGCTTGGAAAATTGTTCTTGCATGGCTTATTCAAACTTGGATGTGGCTGGAGATGGCAGTGGTTGTTCTATATGGTTTGGTGATCTTATTGACTTGAAACAGATCTTAACATTCCAACAATATCTATATATTCGAATGGATGCTTCCACAGTAGATTCAAGTGGAGATGTTTCTGGCGGGAAGAAAAATCATACTTTGGCCATTGCGGTCACTATTCCGTTGGTCGTCATTTTGCTACTGGTGATCATAGTCTTCTACGTCTATATGAGAAAAAGAAAGCAAAGAGAAAATTCAGAGATCAACACTTTAACCGAAGAGAAAGATGAAGACCAACAAGATTTTGAGCTTCCTTTCTTCAATATTTCAACAATGATAAGTGCCACAAATGACTTTTCGAACTATAACAAACTCGGAGAAGGTGGCTTTGGACCAGTATATAAGGGTACACTAGCTACAGATGGGCAAGAGATTGCCGTCAAAAGGCTTTCAGGAAGTTCGAAACAAGGAACAAGAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACACCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATTCATTTCTTTTTGATTCAGCTCAAAAGAAACTTTTAGATTGGTATAAGCGCTTCAACATCATTTGTGGAGTTGCCCGTGGACTGATTTATCTTCATCAAGATTCTAGATTAAGGATCATACATCGAGATCTAAAACCAAGTAATATTTTATTAGACAATGATATGAATGCCAAAATATCAGATTTTGGCTTGGCAAAAATTTGTGGGGATGATCAAGTTGAAGGGAATACAAAAAGAGTGGTTGGAACACATGGTTATATGGCTCCAGAATATGCCATTGATGGGCTTTTCTCCACAAAATCTGATGTATTTAGCTTTGGCGTATTATTGCTAGAGATTGTAAGTGGACAGAAAAATAAAGGACTTACATTTCCAAGCAACAACCATAATCTTGTTGGGCATGCTTGGAGGTTATGGAAAGAGGGAAATTCAGAAGAATTAATTGATGATTGTCTAAAGGACTCATATATTCCATCTGAAGCTTTAAGATCCATACAAGTTGGTCTTTTATGTCTACAACTTCATCCAAATGATAGACCAAATATGACATATGTGCTTGCGATGTTGACGAATGAAAGTGTTTTAGCCCAACCAAAGGAACCTGGTTTCATAATACAAAGGGTCTTTGATGAAGGAGAATCTACAACGAAGCCTTTCTCAATCAATGAGGTTACTATTTCGTTAATAGATGCTAGATGA 2505 0.3649 MTNILSMILFVILNLLFFFKLSTAIDTITQFQSLDDGNTLVSNDGTFELGFFTPGSSTNRYVGIWYKNIPKRRIVWVANRDNPIKDNNSNSTMLIISNEGNLVLLSNNNQTLVWSTNITTRSLSTTSSHVAQLLDNGNFVIKANNNTDQQSNNFLWQGFDFPCDTLLPDMKLGWDLKIGLNRPLTSWKNWDDPSSGDLTWGIVLRSNPEIVLKRGSVEIHRSGPWNGVGFSGAPMEIVTSTVVVARSVNNSNEVYYSYSLVNKSNVSITYLNQTLSLHERIIWSPEDNTWSGIESVPKDDCDVYNHCGPYGNCIYNPSPICQCLDGFEPKSPQNWDASNWTQGCVRKGEETWNCGVNDGFGTFSGLKLPDTTHTWVDANMTLENCKNKCLENCSCMAYSNLDVAGDGSGCSIWFGDLIDLKQILTFQQYLYIRMDASTVDSSGDVSGGKKNHTLAIAVTIPLVVILLLVIIVFYVYMRKRKQRENSEINTLTEEKDEDQQDFELPFFNISTMISATNDFSNYNKLGEGGFGPVYKGTLATDGQEIAVKRLSGSSKQGTREFKNEVILCAKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFLFDSAQKKLLDWYKRFNIICGVARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNAKISDFGLAKICGDDQVEGNTKRVVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGQKNKGLTFPSNNHNLVGHAWRLWKEGNSEELIDDCLKDSYIPSEALRSIQVGLLCLQLHPNDRPNMTYVLAMLTNESVLAQPKEPGFIIQRVFDEGESTTKPFSINEVTISLIDAR* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0099 834 Pfam Protein tyrosine and serine/threonine kinase 522 788 IPR001245 GO:0004672|GO:0006468
Mtr3g0099 834 ProSiteProfiles PAN/Apple domain profile. 354 436 IPR003609 -
Mtr3g0099 834 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Mtr3g0099 834 Pfam Domain of unknown function (DUF3403) 792 834 IPR021820 GO:0004674
Mtr3g0099 834 ProSiteProfiles Protein kinase domain profile. 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0099 834 CDD PAN_AP_plant 353 433 - -
Mtr3g0099 834 PIRSF SRK 1 834 IPR024171 GO:0004674
Mtr3g0099 834 Gene3D Transferase(Phosphotransferase) domain 1 596 802 - -
Mtr3g0099 834 Gene3D Phosphorylase Kinase; domain 1 476 595 - -
Mtr3g0099 834 Pfam PAN-like domain 354 420 IPR003609 -
Mtr3g0099 834 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Mtr3g0099 834 Gene3D - 20 158 IPR036426 -
Mtr3g0099 834 Gene3D Hepatocyte Growth Factor 350 433 - -
Mtr3g0099 834 SMART blect_4 31 162 IPR001480 -
Mtr3g0099 834 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 828 - -
Mtr3g0099 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Mtr3g0099 834 Pfam D-mannose binding lectin 74 188 IPR001480 -
Mtr3g0099 834 SUPERFAMILY Protein kinase-like (PK-like) 502 791 IPR011009 -
Mtr3g0099 834 Coils Coil 481 501 - -
Mtr3g0099 834 SMART serkin_6 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0099 834 SMART ntp_6 355 434 IPR003609 -
Mtr3g0099 834 ProSiteProfiles Bulb-type lectin domain profile. 25 154 IPR001480 -
Mtr3g0099 834 CDD STKc_IRAK 525 793 - -
Mtr3g0099 834 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 828 - -
Mtr3g0099 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 193 IPR036426 -
Mtr3g0099 834 CDD B_lectin 32 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0099 Mtr-Chr3 1096452 1101471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0099 467 832 Receptor kinase-like Gene Family AT3G45860 51.762 8.49e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g0099 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0099 - - mtr:MTR_3g007630 1498.41