Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0085 ATGGATTCTAAGAGGCCACTTTTGTTACAATCTCCAAGAACACCAAATGATCAATATATTCCTACAATACCGGTTTTTCCTGAGCTACCAAAGTCGAAGTCAAGTTCAAGCAACACAGTAACATTTTCCGGTGTTGAATTCGGTCAAGTTGAGAATAAAAACTCTTCAAACTCATCATCATCAAGCAAAAGTTCCATGTCCATTCATTCTATGGGTTCTAGCAAGAGGAACAATTCTGTGAGGGAAATGAGTAGTTTAAACCATTCAGGATCAAAAAGTACTGTGAGGTATGGTTCAAAAGGTGGTGGTGATTCTGAAGGGTTAACCATGTCACAAAGAGAACTTAGAGATGAAGATGCAAGATTGGTATATATAAATGATCCTGAGAAAACCAATGAGAATTTTGAGTTTTTCGGAAATTCAATTCGAACTGCTAAATACTCAATTCTCACTTTCATTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATATATTTTCTCATCATTGCTATTCTCAATCAGCTTCCTCAACTTGCAGTATTTGGAAGATATGTTTCGATTCTACCGTTGGCTTTTGTTCTGTTTGTTACTGGTGTGAAAGATGCTTTTGAAGATTGGAGGAGACACAATTCAGATAAAGTTGAGAATAACAGGTTAGCAACAATTTTGATGAATGACGGTAGTTTCATTGAGAAGAAATGGAAGGATATTCGTGTTGGTGAGATTGTAAAAATCAAAACAAATGAAACAATTCCTTGTGATATTGTTTTGTTATCAACTAGTGATCCAACTGGTGTTGCATATGTGCAAACTATTAATCTTGATGGTGAGAGTAATTTGAAGACTAGGTATGCGAAACAGGAGACAGGTTCAAAGGTTCAACCGAGGTATACTGGTTTGATCAAGTGTGAGAAACCGAATAGGAATATATATGGATTTATGGCGAATATGGAAATCGATGGTAAGAAGTTATCACTTGGATCAACCAACATTGTGCTTAGAGGATGTGAGCTTAAGAATACTAGTTGGGCACTTGGTGTTGCAGTCTATTGTGGCCGCGAGACTAAAGCTATGCTTAACAATTCAGGAGCTCCATCGAAAAGAAGTAGACTAGAGACGCGGATGAATTATGAAATCATTATGTTGTCGTTCTTTCTTGTTGCATTGTGTACAATCACGTCTGTTTGTGCTGCGGTTTGGTTGAAGCGCCATAAGGATGAGTTGAATCTGTTGCCTTATTATAGGAAACTTGATTTTTCAAAGCCGGTAGTTGAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTACCAGGTCATGATTCCTATTGCTTTGTACATTTCTATGGAGCTTGTTCGTGTTGGCCAGGCCTATTTCATGATCGAAGACGATCGATTGTATGATGAGGCTACCAATTCAAAGTTTCAGTGCAGAGCTTTGAATATTAATGAAGATTTAGGGCAAATTAAGTATGTGTTCTCAGATAAAACTGGTACACTTACTGAAAATAAGATGGAGTTTCAATGTGCAAGCATACGAGGAGTCGATTACAGTTCCACAAACACCAGCACGGAGAATGAACTAGGTGAATACTCAGTGCAAGTTGATGGAAAGATCTTAAAACCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCAATTGGCAAGAAATGGAGTTGAAAATGTGGAAGGAAAAAGGATTTATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTATTGTTGTTGACACGCCCGATCCTGATGTCAAGCTGTTAGATTACCAAGGTGAATCACCTGATGAACAAGCATTGGCGTATGCAGCTGCTGCCTATGGTTTTATGCTTATCGAACGAACCTCCGGCCACATAGTCATTGATATTCATGGACAAAGACTCAAGTTCAATGTCTTGGGTTTACATGAATTTGACAGCGATAGAAAAAGAATGTCGGTTATATTAGGCTACCCGGACAGTTCAGTTAAACTCTTTGTCAAAGGAGCAGACACAGCCATGTTTAGTGTAATGGACAAATCACACAACATGGATGTAATAAAAGCGACAGAAACTCATCTTCATTCTTACTCTTCCCTAGGTTTAAGAACACTTGTTATTGGAATGAAAGAGCTAAGCACTTCAGAGTTTGAGCAATGGCATACAGCTTATGAAGCAGCAAGCACTGCAGTATTTGGAAGGGCTGCACTGCTTAAAAAAATTTCAAACCATGTCGAAAACAATGTTTTCATATTAGGAGCATCTGCTATTGAAGATAAACTTCAACAAGGCGTGCCGGAAGCAATTGAGTCGCTAAGAGCAGCAGGGATTAAAGTTTGGGTTTTGACTGGTGACAAACAAGAAACTGCTATATCTATTGGATTCTCATCAAAACTTTTGACAAGAAACATGACTCAAATTATTATTAATAGTAATAGTAAAGTGTCATGTAGAAAAAGTCTCAAAGATGCTCTTGAAAGGTCTAGAAAACTTGACGCAGTTGCAACACAGATAGCTTTGATTATTGATGGTGGAAGCCTTGTACACATTCTTGACAGTGAACATGAGGAAGAGCTGTTTCAACTTGCAAGTTTGTGTTCTGTCGTTCTTTGTTGTCGAGTGGCTCCACTGCAAAAGGCTGGTATTGTTTCCCTTGTGAAGAAAAGAACATCTGACATGACACTAGCCATTGGTGATGGTGCTAATGATGTATCAATGATTCAAATGGCTGATGTTGGAGTTGGTATAAGTGGACAAGAGGGTAGGCAAGCTGTGATGGCATCAGATTTTGCAATGGGACAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTACCAAAGGCTTGGTTACATGATACTATACAATTTCTACAGAAATGCAGTCCTTGTTCTTGTCCTATTTTGGTATGTTCTCTACACTGCTTTCACTTCAACAACTGCAATAAATGAATGGAGCTCCACATTGTACTCAATAATCTACAGTGCACTTCCAACTATTATTGTTGGAATTCTTGACAAAGATCTTAGTAGAAGCACTCTCCTAAAGTATCCTCAACTTTATAGTGCTGGACAAAGAGATGAAGCCTACAACAAGAAATTGTTTATGTTAACAATGGTTGATACTTTGTGGCAAAGCATGGTTGTATTTTGGCCTCCACTCTTTGCATATTGGAAAAGTACTATTGATATAGCAAGCATAGGAGACCTTTGGACTCTTGCAGTGGTTATTTTGGTCAATTTACATTTGGCTATGGATGTTGTTAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTCTTGCTACATTCATTTCTGTCATGATCATTGATGCTATACCTCAACTTCCTGGTTACTGGGCCTTCTTTCATGTTTCAAGCACTGGACTGTTCTGGGCATTGTTGCTAGGAATTGTCATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATATATTTATCAATATTATTTTCCTAGTGATATTCAAATTTCTAGAGAAGCTGAAAAGATGAGAGAATATCAAAGAGTTGCTGAAAATGGACAAATAGAAATGCTTCCTATATCATATCATCAACCAAGATAA 3642 0.3778 MDSKRPLLLQSPRTPNDQYIPTIPVFPELPKSKSSSSNTVTFSGVEFGQVENKNSSNSSSSSKSSMSIHSMGSSKRNNSVREMSSLNHSGSKSTVRYGSKGGGDSEGLTMSQRELRDEDARLVYINDPEKTNENFEFFGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLATILMNDGSFIEKKWKDIRVGEIVKIKTNETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVQPRYTGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRETKAMLNNSGAPSKRSRLETRMNYEIIMLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSKPVVEDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLYDEATNSKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIRGVDYSSTNTSTENELGEYSVQVDGKILKPKMKVKVNPELLQLARNGVENVEGKRIYDFFLALATCNTIVPIVVDTPDPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRLKFNVLGLHEFDSDRKRMSVILGYPDSSVKLFVKGADTAMFSVMDKSHNMDVIKATETHLHSYSSLGLRTLVIGMKELSTSEFEQWHTAYEAASTAVFGRAALLKKISNHVENNVFILGASAIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGFSSKLLTRNMTQIIINSNSKVSCRKSLKDALERSRKLDAVATQIALIIDGGSLVHILDSEHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTSTTAINEWSSTLYSIIYSALPTIIVGILDKDLSRSTLLKYPQLYSAGQRDEAYNKKLFMLTMVDTLWQSMVVFWPPLFAYWKSTIDIASIGDLWTLAVVILVNLHLAMDVVRWYWVTHAVIWGSILATFISVMIIDAIPQLPGYWAFFHVSSTGLFWALLLGIVIAALLPRLVVKYIYQYYFPSDIQISREAEKMREYQRVAENGQIEMLPISYHQPR* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0085 1213 SFLD p-type atpase 489 962 IPR044492 -
Mtr3g0085 1213 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1213 - -
Mtr3g0085 1213 Pfam E1-E2 ATPase 223 464 - -
Mtr3g0085 1213 CDD P-type_ATPase_APLT_Dnf-like 139 1069 - -
Mtr3g0085 1213 SUPERFAMILY HAD-like 501 957 IPR036412 -
Mtr3g0085 1213 Pfam Phospholipid-translocating ATPase N-terminal 123 190 IPR032631 -
Mtr3g0085 1213 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 778 IPR023299 GO:0000166
Mtr3g0085 1213 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 881 999 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr3g0085 1213 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 438 528 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr3g0085 1213 Gene3D - 202 363 - -
Mtr3g0085 1213 MobiDBLite consensus disorder prediction 1 112 - -
Mtr3g0085 1213 MobiDBLite consensus disorder prediction 29 98 - -
Mtr3g0085 1213 Pfam Phospholipid-translocating P-type ATPase C-terminal 939 1179 IPR032630 -
Mtr3g0085 1213 Gene3D - 612 741 IPR023299 GO:0000166
Mtr3g0085 1213 SFLD Haloacid Dehalogenase 489 962 - -
Mtr3g0085 1213 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1213 - -
Mtr3g0085 1213 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 137 1186 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr3g0085 1213 Gene3D - 762 951 IPR023214 -
Mtr3g0085 1213 SUPERFAMILY Calcium ATPase, transduction domain A 225 360 IPR008250 -
Mtr3g0085 1213 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
Mtr3g0085 1213 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Mtr3g0085 1213 PRINTS P-type cation-transporting ATPase superfamily signature 789 799 - -
Mtr3g0085 1213 PRINTS P-type cation-transporting ATPase superfamily signature 911 930 - -
Mtr3g0085 1213 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1178 IPR023298 -
Mtr3g0085 1213 Pfam Cation transport ATPase (P-type) 610 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0085 Mtr-Chr3 986269 992813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0085 73 1197 Primary Pumps ATPases AT5G04930 69.938 0.0 1667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0085 K14802 - gmx:100813982 1867.05