Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0076 ATGGCCGAAGTCGAAAATCTCCCTCCCGAATCACACGACCGATCTCCCACCATCACCACCGCTCCACCTCCTCCCGACGACGATCTCCCACCTCCACCTAATCCCAACCCTCGTCGTCGCGATTTCGACCGTCGTGACGACAGAGATTTCGACCGCCGTCCTCACCGTGGCGGCCGTGGTGGCCGCGGTGGCGGTGGTTACTACAACAACCGTGATAGAGACATCAAACGCCGTCGTAGTCCTAGCCCTAACTATCGTGACCGCCGCTATTCTCCTCCTCCGCAACAGTCTCGTCGTTCTCCTCCGCCGTATAAGAGATCTAGAAGGGGTAGTCCTCATAGACCTAACGACAGGTTTGGCCATGATCACTTTGGTGGCTATGAACGGGGAGGTGGAAGGGGTGGCTATGCAGATGATAGACCTGGTGGCAGATTTCCACATCGATCTGGAGGGGGATATCAAAACGGAATTTCTGATTTGGATGCCAATCGCGGTTATGCAGATTTGCCAAGTGGGGGTGCTCGAAGAGAGGGTTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAAGATGATATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAGTCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATACCCACAAGGATGCTGAGTGGTTGAAAGATAAGTATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGTTTGGCAAAGGAGTTTTTGCTTGATTTGCAAAGTGGAACACTAGACATAAATCCAGGTTTAAACTCTGCATCCACTAAATCAGAGCAAGCCACTGAGCCCAATTCAGAGGAGGAAACAGATGCCGGTGGTAAAAGAAGAAGACATGGCAGGGGATCTAATAAGGACAACGATTTCTCTGCTGCTCCGAAGGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGAAGATATTCATCAGGTTCAGGCTGTTGTTCGTAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGCACCAATGATCATAGTAAAAATAGTGACAAGGCTCGCAGTGGATCTGTGGGCCCTGTAGTAATTATCCGTGGCTTAACATCTATTAAGGGCTTAGAGGGTGTTGAGCTACTGGACACGCTTATAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGACTAGTGATGCCAAAGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACAGCTAAGTCGGGGTCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGAGAAGGTTGGACGGCCTGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGTTGGAAGTATGGCTGTGGAGCCAAGAGTTGCACAAAGCTTTTTCATGCTGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACACCCAGAGCTTGTGTTGGAACTAACATCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACGCCTGTCATGCAGCAATCTCAGGACAAACCTTTAAAGCGAAGGTTACTGGAAGGCCGATTGAAAGATGATCGTGGGAATCGGCGAGACCAGGATAGGAGCGACAGAACAAATGGAGATAGACCTGACAGTTCGCCATCCCATGAGAGGCAGTTGGGAAACCGTGATGAAACGATGTTCGATGCATATGGTGGACCTGCTGTATCATTCAACTCAGATATGCCCCCTCCTCCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCGTATGATCCATCAGGAATGACGATGCGTTCTGGTCCTCACATAGGGGGACAAGCCTCTATGATTGCTGTTCCTCCCACCTTTAGACCTGATCCCCGACGGATGCGGAGTTATCAAGACTTGGATGCCCCAGAAGAAGAAGTTACTGTCATAGACTATCGGAGCTTGTAG 2115 0.4742 MAEVENLPPESHDRSPTITTAPPPPDDDLPPPPNPNPRRRDFDRRDDRDFDRRPHRGGRGGRGGGGYYNNRDRDIKRRRSPSPNYRDRRYSPPPQQSRRSPPPYKRSRRGSPHRPNDRFGHDHFGGYERGGGRGGYADDRPGGRFPHRSGGGYQNGISDLDANRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGTLDINPGLNSASTKSEQATEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQDKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRPDSSPSHERQLGNRDETMFDAYGGPAVSFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSYDPSGMTMRSGPHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEEVTVIDYRSL* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0076 704 Pfam Arsenite-resistance protein 2 424 603 IPR007042 -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 265 325 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 280 303 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 531 602 - -
Mtr3g0076 704 Pfam SERRATE/Ars2, N-terminal domain 183 264 IPR021933 -
Mtr3g0076 704 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 704 IPR039727 GO:0006397
Mtr3g0076 704 ProSitePatterns Zinc finger C2H2 type domain signature. 486 509 IPR013087 -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 113 128 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 1 164 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 33 58 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 69 85 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 549 594 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 658 689 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 18 32 - -
Mtr3g0076 704 MobiDBLite consensus disorder prediction 265 279 - -
Mtr3g0076 704 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0076 Mtr-Chr3 877285 884822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0076 85 704 C2H2 Transcription Factor Family AT2G27100 61.455 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0076 - - gmx:100817569 1016.53