Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0060 ATGGAATCCAGATTAGTTGATCGAAGTGACGGGGCAGAAGTTTCCGGGGATGGTAATTTGGTGGAACCGAATGATGGGTGTAGATCAGCAAAGAGTTATTCTGGGAGAGAGTTGGGTATCTCTGATCATGACAATGCTGTTAAGGAACCATATGAAGGCATGGAATTTGTATCCGAAGATGCTGCTAAGATATTTTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGGCGCTCAGAAAGAGATGGTAGGATTCTCGCCCGCAGGTTTGGATGTAATAAGGAGGGCCATTGTGTTAGCATACAAGGGAAACTTGGTCCAGTTCGTAAACCAAGGGCCAGCACTAGGGAAGGTTGTAAGGCGATGATTCATATCAAGTATGATCAGTCCGGAAAATGGATGATAACAAAGTTTGTAAAAGATCATAATCATCCACTAGTCGTCTCTCCACGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAACTAACAGTAGAACTTCGGATTAAAAAACGGTTGTGTGTAACATATCAAGAACAGTTAAAGTGTTATATGAATATTGTTGAAGAGCACAGTGACAAGCTGTCTGCAAGAATTCATCACATACTTGATAATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAGACGTAG 690 0.413 MESRLVDRSDGAEVSGDGNLVEPNDGCRSAKSYSGRELGISDHDNAVKEPYEGMEFVSEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRFGCNKEGHCVSIQGKLGPVRKPRASTREGCKAMIHIKYDQSGKWMITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTVELRIKKRLCVTYQEQLKCYMNIVEEHSDKLSARIHHILDNLKEYESIEELLHQT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0060 229 MobiDBLite consensus disorder prediction 1 33 - -
Mtr3g0060 229 Coils Coil 163 183 - -
Mtr3g0060 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 228 - -
Mtr3g0060 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
Mtr3g0060 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0060 Mtr-Chr3 678686 688725 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g0060 FAR1 1e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0060 - - pvu:PHAVU_005G002900g 372.089