Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0056 ATGGCTTCCCTCACAGATCGATTCAAGTATGACGTTTTCATCAGTTTCAGAGGCGAAGATACTCGCTATGGTTTCACCGGCTATCTCAAGAAAGCTCTTGATGACAAAGGAGTCCGTACTTTCATGGATGACGACGAGCTTCGAAAAGGCGAAGAAATTACACCATCACTTCTCAAAGCAATTGAAGACTCTATGATGGCCATTATTGTTCTCTCTAAGAACTATGCTTCTTCCTCTTTTTGCTTACAAGAATTTTCAAAGATCCTTGATTCTATGATGAAAGATACCGGTCGTTTTGTTTTGCCGGTTTTTTATAAGGTGGATCCTTCTGATGTACGAAAGTTGAAAAACACTTATGGTAAGGCAATGGCTAAACATAAGACCAGCTTCGATATGGATAAATGGAAGTTATCTCTTCACCAAGTTGCTAATTTGTGTGGCTTTCATTATAAAGGGGATGCGTATGAGTATGAGTTTATTGAGAAGATTGTTGAACAAGTCTTAAGAAATATAAAACCTGTTTCCTTACTTGTTGGTGAGTACCTAGTTGGACTGGAGCACCAAAAGCAACACGTGACTTCACTTTTGAATATTGGGTCTGATGATACGATCCACATGGTGGGGATCCTTGGGATTGGTGGAATAGGGAAAACTACTCTTGCTCTGGAAGTTTATAATTCGATTGTTCATCAATTTCAATGTTCCTGTTTTGTTGAAAAAGTCAGAGAAAATTCTGACAAAAATGGGTTGATACATCTCCAAAAGATCCTTTTGTCTCAAATTGTTGGAGAGAAGAACACAGAGATAACAAGTGTTGGACAAGGAATTTTAATATTACAAAAAAGGCTTCAACAAAAGAAGGTTCTTTTGCTTCTAGACGATGTTGACAAAGAGGAGCAATTGAAGGCTATTGCTGGAAGTTCCGATTGGTTTGGTCCAGGCAGTAGAGTCATCATCACGACTCGGGACAAAAGGTTGCTAAAATGTGGTGGGGTTAAGAGAATATATGAAGTGAAGGGATTGAAGGATGAAGATGCTTTTGACTTGGTGGGATGGAAAGCTTTAAAAAATGATTATAGTCCAAGATATAAAGATGTTTTATTAGAACAAAAGTATGGAAGAGAATTGGATGTGAACGAATTGCGTAGACTGAAAGATTTGAAGAATGACAAAGGTTTTTCAGGTTATGCGAATGTTTTAAAACGTGTCGTAGCATATGCTTCTGGTCATCCACTTGCTTTGGAAGTCATGGGTTCTCATTTTTCTAATAAGACAATAGAACAATGTGAAGATGCATTAGATCGTTATGAAAGAGTTCCTCATAACAAGATCCAAATGACACTACAGCTGAGCTTTGATGCCTTGCAGAAAGAAGAAAAGTTTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATGGAAATTGACAAGGGTTGAAGAAATACTTCATGCTCATTATGGTGATATCATGAAAGATCACATTAATGTGTTGGTGGAAAAATCTCTCATAAAAATAAGTGATTCTGGTAATGTGACATTACATGATTTGGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCCGAAGATCCCGGGAAGCGAAGTCGGTTATGGTCTTCTAAAGATATAATTCAAGTTTTACAAGAAAATACTGGAACAAGTAAAATTGAAATCATACATTTTGGCTGTTGGATTAAAGTACAATGGGATGGACAAGCTTTCTTGAAGATGGAAAATCTCAAAACACTAATTTTTAGTGATGATGTTTCTTTTTCTACAAATCCTAAACATCTTCCAAATAGTCTAAGAGTGTTGGAATGTCGCAATCGCAATTGCAAGTATCCTTCGTCGGATTTCCATTTTTTCATTTGCAATCGCAATATCAATCGCAAACATCCTTCATCAAATCCATTTGAGTGGAAGGCCTTTCTCACAAAGAAGTTCCAGAATATGAGAGTTTTAAGTCTTGATAACAGTAATCTTTTGGCACAAATACCTGATATATCTGGTCTCCCAAATTTAGAAGAATTTTCAGTTCAAAAATGTTGGGAACTAACTACAATTGATAAATCAGTTGGTTTTTTGCGTAAACTTAAAATCTTGAGATTTATAGATTGCACCAAAATCCAGAGTGTTCCGCCTCTCAATTTGGCTTCATTGGAAGAACTTGATCTTTCACGTTGTTATAGTCTAGAAAGTTTTCCTCTCCTGGTGAATGGATTTTTTGGAGAACTTAAAATCTTAAGGATTATAAAATGCACCAAAATCAAAATTATTCCATCTCTCATGTTACCTTCTCTAGAAGAACTCGATCTTTCAGATTGTACTAATCTTGAGAATTTTTTACCTGTGGAAGATGGGTTTGGTGATAAGCTTAAAACCATGAGTGTTAGACGTTGCATCAAGCTAAGGAGTATTCCACCTCTCAAGTTGGATTTGCTAGAAACACTTAACCTTTCATGTTGTTATAGTCTTGAGAGTTTTCCACTTGTGATGGACGGGTTTCTTGGAAAACTTAAAACTCTACTTGTTAATAGTTGCATCAAGCTAAGGAGTATTCCACCTCTCAAGTTGGATTTGCTAGAAAAACTTGACCTTTCATATTGTGGTGCCCTTGAGTGTTTTCCACTTGTGGTAGACGGGTTTCTTGGAAAACTTAAAACCTTGCTTGTTAAAAGTTGTCACAACCTCAAGAGTATTCCACCTCTCAAGTTGGATGCACTAGAAACACTTGATCTTTCATGTTGTTATAGTCTTGAAAGTTTTCCACTTATAGTAGACGGGTTTCTTGGAAAACTTAAAACCCTACTTGTTACTAGTTGTGGCAATCTCAGAAGTATTCCACCTCTCAAGTTGGATTCGCTAGAAAAATTTGACCTTTCTTATTGTGGTAGTCTTGAGAGTTTTCCATTGGTGGTGGATGGGTTTCTTGGAAAACTTGAAACCCTTCTTGCTGAAAATTGTCACAATCTTAGGAGTATTCCACCTCTTAAGTTGGATTCACTAGAAACATTTGACCTTTCATGTTGTTATAGTCTTGAGAGTTTTCCACTTGTGGTGGACGGTTTTCTTGGAAAACTTAAAACCTTACTTGTTACAAGTTGTCACAATCTTAAGAGTATCCCACCGCTCAAGTTGGATTCTTTAGAAACACTTGACCTTTCATGTTGTTATTGGCTCGAAAGTTTTCCACTTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGCGTGTTACAAGTTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTTGCTAGAAGAACTTGACCTTTCAAATTGTTATAGGCTCGAGAATTTTCCACTTGTGGTTCACGGGTTTCTTGGAAAACTTAAAACCCTTCTTGTTACAAGTTGTCACAATCTCAGGAGTATTCCACCTCTCCAGTTGGATTCACTTGAAAAACTTGACCTTTCAAATTGTTATAGGCTCGAGAGTTTTCCACTTGTGGTGGATGGGTTTCTTGGAAAACTTAAAACCCTACTTGTTACAAGTTGTCACAATCTCAGGAGTATCCCACCTCTCAATTTGGATTCTTTAGAAAAACTTGACCTTTCATGTTGTTGTAGTCTTGAGAGTTTTCCATTGGTGGTGGATGGGTTGTTGGATAAACTTAAATTCTTGAATATCGAATGTTGCATCATGCTTAGGAATATCCCACGGCTCAGGTTGACTTTGTTGGAACATTTCAATCTTTCATGTTGTTATAGTCTTGAGAGTTTTCCAGAAATATTGGGAGAGATGAGAAATGTACCAGGAGTCCTCTTGGATGAAACTCCCATAAAAGAATTGCCGTTTCCATTTCAAAATCTTACACAACCTCAAACATTATGTAACTGTGGATATGTCTACTTACCAAATAGGATGTCAAGACTGGCTGAATTTACTATCCAGAATGAAGAGAAAGTGAACGCAATGCAATCTTCACATGTAAAGCATATTTGTGTCAGGAACTGCAAACTTTCAGATGAATATCTGTCAAAAAGTCTTATGTTGTTTGCTAATGTGAAAGAATTACACCTAACTAAAAATCAATTCACAGTTCTTCCTAAATCTATCGAAAAATGTCATCTTTTATGGAGGCTTGTCTTGGATGATTGTGAGGAACTTTTGGAAATTGAAGGGATTCCTCCATGCTTAAAATCTTTATCTGCAATAAACTGCAAATCGTTGACTTCGTCGTGCAAAAGCAAATTACTAAATCAGGAATTACATGAGGCTGGAAATACTTGGTTCCATTTGCCACAAGCGAAAATTCCAGAGTGGTTCAATCACCAATGTTTGGCAGGATTGTCAATTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCATTACTCTCTGTGTTGTTTCTCCATTGACATGTTATGGTTCTCAACATCGTGTAAAAGCGACCATCAACGGCAATACATTTTTCTATACACATGGTTCGAAGATAGGTACGGCATCACATAAGGATACATACCATTTGCATCTTTTTCATATGCAAATGAAGTACTTCAATGATAATATGGACAAAGCACTTTTAGAAAATAAGTGGAATCATGCAGAGGTTGACTTTGGATTCCCATTCATGTATAGTGGAATCCATGTATTGGAAGAGAAAAGTAACATGAAAGATATTCGATTCAGTAACCCAGAGATTGATGCTAACATTGTGTTACACCCGGGATGTTAA 4710 0.3694 MASLTDRFKYDVFISFRGEDTRYGFTGYLKKALDDKGVRTFMDDDELRKGEEITPSLLKAIEDSMMAIIVLSKNYASSSFCLQEFSKILDSMMKDTGRFVLPVFYKVDPSDVRKLKNTYGKAMAKHKTSFDMDKWKLSLHQVANLCGFHYKGDAYEYEFIEKIVEQVLRNIKPVSLLVGEYLVGLEHQKQHVTSLLNIGSDDTIHMVGILGIGGIGKTTLALEVYNSIVHQFQCSCFVEKVRENSDKNGLIHLQKILLSQIVGEKNTEITSVGQGILILQKRLQQKKVLLLLDDVDKEEQLKAIAGSSDWFGPGSRVIITTRDKRLLKCGGVKRIYEVKGLKDEDAFDLVGWKALKNDYSPRYKDVLLEQKYGRELDVNELRRLKDLKNDKGFSGYANVLKRVVAYASGHPLALEVMGSHFSNKTIEQCEDALDRYERVPHNKIQMTLQLSFDALQKEEKFVFLDIACCFKGWKLTRVEEILHAHYGDIMKDHINVLVEKSLIKISDSGNVTLHDLVEDMGKEIVRQESPEDPGKRSRLWSSKDIIQVLQENTGTSKIEIIHFGCWIKVQWDGQAFLKMENLKTLIFSDDVSFSTNPKHLPNSLRVLECRNRNCKYPSSDFHFFICNRNINRKHPSSNPFEWKAFLTKKFQNMRVLSLDNSNLLAQIPDISGLPNLEEFSVQKCWELTTIDKSVGFLRKLKILRFIDCTKIQSVPPLNLASLEELDLSRCYSLESFPLLVNGFFGELKILRIIKCTKIKIIPSLMLPSLEELDLSDCTNLENFLPVEDGFGDKLKTMSVRRCIKLRSIPPLKLDLLETLNLSCCYSLESFPLVMDGFLGKLKTLLVNSCIKLRSIPPLKLDLLEKLDLSYCGALECFPLVVDGFLGKLKTLLVKSCHNLKSIPPLKLDALETLDLSCCYSLESFPLIVDGFLGKLKTLLVTSCGNLRSIPPLKLDSLEKFDLSYCGSLESFPLVVDGFLGKLETLLAENCHNLRSIPPLKLDSLETFDLSCCYSLESFPLVVDGFLGKLKTLLVTSCHNLKSIPPLKLDSLETLDLSCCYWLESFPLVVDGFLGKLKTLRVTSCHNLRSIPPLKLDLLEELDLSNCYRLENFPLVVHGFLGKLKTLLVTSCHNLRSIPPLQLDSLEKLDLSNCYRLESFPLVVDGFLGKLKTLLVTSCHNLRSIPPLNLDSLEKLDLSCCCSLESFPLVVDGLLDKLKFLNIECCIMLRNIPRLRLTLLEHFNLSCCYSLESFPEILGEMRNVPGVLLDETPIKELPFPFQNLTQPQTLCNCGYVYLPNRMSRLAEFTIQNEEKVNAMQSSHVKHICVRNCKLSDEYLSKSLMLFANVKELHLTKNQFTVLPKSIEKCHLLWRLVLDDCEELLEIEGIPPCLKSLSAINCKSLTSSCKSKLLNQELHEAGNTWFHLPQAKIPEWFNHQCLAGLSISFWFRNKFPAITLCVVSPLTCYGSQHRVKATINGNTFFYTHGSKIGTASHKDTYHLHLFHMQMKYFNDNMDKALLENKWNHAEVDFGFPFMYSGIHVLEEKSNMKDIRFSNPEIDANIVLHPGC* 1570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0056 1569 ProSiteProfiles TIR domain profile. 8 171 IPR000157 GO:0007165
Mtr3g0056 1569 PANTHER ARCHAEAL ATPASE 20 1011 - -
Mtr3g0056 1569 PANTHER ARCHAEAL ATPASE 1122 1532 - -
Mtr3g0056 1569 Gene3D - 4 175 IPR035897 -
Mtr3g0056 1569 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Mtr3g0056 1569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 367 IPR027417 -
Mtr3g0056 1569 Pfam TIR domain 9 171 IPR000157 GO:0007165
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 1025 1165 IPR032675 -
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 743 837 IPR032675 -
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 1166 1266 IPR032675 -
Mtr3g0056 1569 Gene3D - 384 456 IPR042197 -
Mtr3g0056 1569 Pfam NB-ARC domain 190 447 IPR002182 GO:0043531
Mtr3g0056 1569 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1122 1532 IPR044974 GO:0006952
Mtr3g0056 1569 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1011 IPR044974 GO:0006952
Mtr3g0056 1569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 466 IPR027417 -
Mtr3g0056 1569 SUPERFAMILY L domain-like 1075 1423 - -
Mtr3g0056 1569 SUPERFAMILY "Winged helix" DNA-binding domain 442 550 IPR036390 -
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 1296 1446 IPR032675 -
Mtr3g0056 1569 SUPERFAMILY L domain-like 813 1159 - -
Mtr3g0056 1569 SMART till_3 9 145 IPR000157 GO:0007165
Mtr3g0056 1569 SUPERFAMILY L domain-like 561 925 - -
Mtr3g0056 1569 Pfam C-JID domain 1426 1533 IPR045344 -
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 535 742 IPR032675 -
Mtr3g0056 1569 Gene3D Ribonuclease Inhibitor 857 1024 IPR032675 -
Mtr3g0056 1569 PRINTS Disease resistance protein signature 206 221 - -
Mtr3g0056 1569 PRINTS Disease resistance protein signature 282 296 - -
Mtr3g0056 1569 PRINTS Disease resistance protein signature 407 421 - -
Mtr3g0056 1569 PRINTS Disease resistance protein signature 717 733 - -
Mtr3g0056 1569 Gene3D - 176 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0056 Mtr-Chr3 632599 640974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0056 740 925 WRKY Transcription Factor Family AT4G12020 31.771 2.00e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0056 - - mtr:MTR_3g006280 3004.16