Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0051 ATGTTGGGCCGGCTCAGTGAAGAACCCGACTCAAGTCAATTAAACTTCAAAACCCTCATTTCAGCTCTGTCGCCGCAAATACAACAAATTCCCTTCAAGATGAAGAAGCTCTCAGTTGGTGATGCATTATCGTTACTCGCAGCAGTAAAACGTAGGTTTGGATATGAGAAAAGGGAAAAATATGGATCATTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGGGATGTCAAATTAAGAGTGTACGAATTGTTGGACGGCCATGAAGATTTAATTTCGAGATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTAGATCGAGACGATGATGATGATGAACAACAAGAAGGTCGTATGTTAGAGACAAAAGATGCATTTGCTTTTCTCGAGAAAGTAAAAGATGTGTTTCATGATAAGAATAGGGAAAAGTATGATGAGTTTTTAGAAATTGTTAAGGATTTTAAGTTTCGGAGAATTGATATAAGTGTTGTCGCGGCAAGAGTGAATGAGCTGTTTCAAGGGCATACAGATTTAATTTTTGGAGTCAATGCCTTCTTGCCAAAGAAATATCGAATCACAACTTCAGTTCAGCTGGACACTGGGGAAGTAATGAATAACATCCAAGATGGTTGTAAAATTTCATGGGATATGCTTGATGTCATTTCCAGAGATCTAGATTTCGATGACCTCTTTCAATTCGCTGGGGTGTGCAAGAATTGGAGGGAATTTCATAAAATTTATTGGAAAAAGTTCTTGGCACTCCAGGAACCATTACTTATTCAAAAGTCTTCCCATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCGAAGACGATCAATCAATTCTGGCACGTTGCATATTCTGGCTGTTCTAGCGGTTATTTGATCATGACAGGGGACAATAATTCTTTTCTGCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTACTTGCTTTTGGCAAAGGCTCGGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGATCTGGCAGTTTGTATGTCTATCAGTCTCGAAATTTGGGTTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGGTTGTTGACTTTGTTGTTTTGCATCATACTATATACGTTGTCACTGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAAATATAAAATTTTTAGAACTGAAGAGTACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGTTGTGATGGACAACTTTTATTGATTCATATTGCTTCTGAGGAAATATTGAATGTATACAAGATAGACTTCTCAACCATGAATTATATCAAGCTGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCCGGGGAATACTTCAATGCATTGAGCAACCCGAGAAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATCTTTCATCCACAACATGTATAGTGTGTTTAGGGGATGATAACGAACTGCCAAAATACATTAAGGATGATAGATTTCGAGTTCCTCCGAAGGAAAATGCCTACTTGCTGGATTGGTGTTTTAGACATCTACAGTATGAGGTGGATCTTTCGCCAGATGAGTAA 1692 0.3765 MLGRLSEEPDSSQLNFKTLISALSPQIQQIPFKMKKLSVGDALSLLAAVKRRFGYEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISRFNIFLPTEYEIKLPLDRDDDDDEQQEGRMLETKDAFAFLEKVKDVFHDKNREKYDEFLEIVKDFKFRRIDISVVAARVNELFQGHTDLIFGVNAFLPKKYRITTSVQLDTGEVMNNIQDGCKISWDMLDVISRDLDFDDLFQFAGVCKNWREFHKIYWKKFLALQEPLLIQKSSHDKKSFSFISIADRKVYHSKTINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKRSGSLYVYQSRNLGWVTYSTMESPWKVVDFVVLHHTIYVVTDKANIGVLDLNSTNIKFLELKSTPDVTSTSLLRMVSCDGQLLLIHIASEEILNVYKIDFSTMNYIKLETLGDIALFYASGEYFNALSNPRRWGFESNSLYAINLSSTTCIVCLGDDNELPKYIKDDRFRVPPKENAYLLDWCFRHLQYEVDLSPDE* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0051 563 Pfam Paired amphipathic helix repeat 150 194 IPR003822 GO:0006355
Mtr3g0051 563 Pfam Paired amphipathic helix repeat 59 103 IPR003822 GO:0006355
Mtr3g0051 563 ProSiteProfiles PAH domain profile. 126 197 IPR003822 GO:0006355
Mtr3g0051 563 SUPERFAMILY PAH2 domain 35 105 IPR036600 GO:0006355
Mtr3g0051 563 PANTHER OS06G0113600 PROTEIN 206 558 - -
Mtr3g0051 563 PANTHER OS06G0113600 PROTEIN 206 558 - -
Mtr3g0051 563 ProSiteProfiles PAH domain profile. 35 106 IPR003822 GO:0006355
Mtr3g0051 563 SUPERFAMILY PAH2 domain 128 196 IPR036600 GO:0006355
Mtr3g0051 563 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 276 519 IPR011044 -
Mtr3g0051 563 Gene3D Paired amphipathic helix 41 104 IPR036600 GO:0006355
Mtr3g0051 563 Gene3D Paired amphipathic helix 132 195 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0051 Mtr-Chr3 572127 576263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0051 128 201 WRKY Transcription Factor Family AT4G12020 48.649 3.46e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr3g0051 PAH 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0051 K11644 - cam:101488742 699.893