Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0010 ATGTCAGAATTAGGCAATGAGGGAGGAATAAGGAGACACCAACGTACATATTCCGATAGCATGCTATCTGAGCAGCAACAGCAGGAAGTACCCTGTTGGTTGAAAGATCTCCTTGATGATGAAGAAGATCAGAAGCAGCCTAGTACTGTATGCAGCAACAAGACTCATAGAAGATCATCAAGTGACTCCTTAGCATACTTAAATAATAAAACTATTCTTCAACATTCTCCAGAAAGGAAGGTTGTAGATTCACAACCCTCCTTTCTACAACAACATCATTCGAGATCTGATCATTCCAAACGAGGCAAAAGAAATTCAGGTCAACAACACCGGGCAAGGAAGGCTCAATACATTGGAGAACTAGAAAGAAGTGTCCAAGCTTTACAGGCAGAAGGATATGAAGTTTCAGCTGAGCTTGAATTTCTTGATCAGCAAAACCTCATATTAGGTATGGAGAACAGGGCCCTCAAACAACGCTTGGACAGTTTATCTCAAGAACACTTCATCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTACGAAATCTATATCAGCAACAACAACACAAACAACACCAGCAGCAGCAACAACAAAAGAATCATGGTAGGAATCGATCTAAACAACGTCAAGATCTTGATGCATCAATTGCCAAATTTTCTTTGAAGAATAAGGGAAGAAGGATAGATAGTGTGATCTGA 711 0.4023 MSELGNEGGIRRHQRTYSDSMLSEQQQQEVPCWLKDLLDDEEDQKQPSTVCSNKTHRRSSSDSLAYLNNKTILQHSPERKVVDSQPSFLQQHHSRSDHSKRGKRNSGQQHRARKAQYIGELERSVQALQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFIKCLEQEVLEREITRLRNLYQQQQHKQHQQQQQQKNHGRNRSKQRQDLDASIAKFSLKNKGRRIDSVI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0010 236 PANTHER - 75 226 - -
Mtr3g0010 236 PANTHER - 14 72 - -
Mtr3g0010 236 Coils Coil 174 194 - -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 48 92 - -
Mtr3g0010 236 SUPERFAMILY Leucine zipper domain 103 154 IPR046347 GO:0003700|GO:0006355
Mtr3g0010 236 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 75 226 IPR044797 -
Mtr3g0010 236 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 14 72 IPR044797 -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 188 219 - -
Mtr3g0010 236 Gene3D - 91 168 - -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 96 110 - -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 1 114 - -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 1 18 - -
Mtr3g0010 236 MobiDBLite consensus disorder prediction 188 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0010 Mtr-Chr3 125467 127422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0010 102 170 bZIP Transcription Factor Family AT2G42380 52.174 3.56e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0010 - - mtr:MTR_3g005230 365.54